RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 H3BPC8 53 aa10.54□□□□□ -0.72
PTPN11-201ENST00000351677 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
PTPN11-201ENST00000351677 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
PTPN11-201ENST00000351677 A8MWP4 228 aa10.53□□□□□ -0.72
PTPN11-201ENST00000351677 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
PTPN11-201ENST00000351677 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
PTPN11-201ENST00000351677 IGFL1Q6UW32 110 aa10.52□□□□□ -0.72
PTPN11-201ENST00000351677 Q8N377 158 aa10.52□□□□□ -0.73
PTPN11-201ENST00000351677 LAMA3Q16787 3333 aa10.52□□□□□ -0.73
PTPN11-201ENST00000351677 USP24Q9UPU5 2620 aa10.5□□□□□ -0.73
PTPN11-201ENST00000351677 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
PTPN11-201ENST00000351677 A0A0C4DFX4 3053 aa10.49□□□□□ -0.73
PTPN11-201ENST00000351677 BRCA2P51587 3418 aa10.47□□□□□ -0.73
PTPN11-201ENST00000351677 Q96NJ1 140 aa10.47□□□□□ -0.73
PTPN11-201ENST00000351677 CFAP54Q96N23 3096 aa10.47□□□□□ -0.73
PTPN11-201ENST00000351677 CASC10Q5T4H9 136 aa10.46□□□□□ -0.74
PTPN11-201ENST00000351677 KRTAP1-1Q07627 177 aa10.45□□□□□ -0.74
PTPN11-201ENST00000351677 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
PTPN11-201ENST00000351677 IGLV8-61A0A075B6I0 122 aa10.43□□□□□ -0.74
PTPN11-201ENST00000351677 WWC2-AS2Q96NR7 200 aa10.43□□□□□ -0.74
PTPN11-201ENST00000351677 ERC2-IT1O76042 136 aa10.43□□□□□ -0.74
PTPN11-201ENST00000351677 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
PTPN11-201ENST00000351677 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
PTPN11-201ENST00000351677 TLX1NBP0CAT3 122 aa10.41□□□□□ -0.74
PTPN11-201ENST00000351677 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
PTPN11-201ENST00000351677 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.74
PTPN11-201ENST00000351677 MGAM2Q2M2H8 2515 aa10.4□□□□□ -0.74
PTPN11-201ENST00000351677 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.74
PTPN11-201ENST00000351677 PRR15Q8IV56 129 aa10.4□□□□□ -0.74
PTPN11-201ENST00000351677 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
PTPN11-201ENST00000351677 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
PTPN11-201ENST00000351677 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
PTPN11-201ENST00000351677 DSCR10P59022 87 aa10.38□□□□□ -0.75
PTPN11-201ENST00000351677 COA5Q86WW8 74 aa10.38□□□□□ -0.75
PTPN11-201ENST00000351677 A0A087WTM6 91 aa10.37□□□□□ -0.75
PTPN11-201ENST00000351677 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
PTPN11-201ENST00000351677 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
PTPN11-201ENST00000351677 ZNF861PO60384 105 aa10.36□□□□□ -0.75
PTPN11-201ENST00000351677 A8MUN3 132 aa10.36□□□□□ -0.75
PTPN11-201ENST00000351677 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
PTPN11-201ENST00000351677 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
PTPN11-201ENST00000351677 TRANK1O15050 2925 aa10.34□□□□□ -0.75
PTPN11-201ENST00000351677 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
PTPN11-201ENST00000351677 ITPR3Q14573 2671 aa10.34□□□□□ -0.75
PTPN11-201ENST00000351677 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
PTPN11-201ENST00000351677 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
PTPN11-201ENST00000351677 H7BZZ5 65 aa10.31□□□□□ -0.76
PTPN11-201ENST00000351677 MGAQ8IWI9 3026 aa10.3□□□□□ -0.76
PTPN11-201ENST00000351677 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
PTPN11-201ENST00000351677 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
PTPN11-201ENST00000351677 UNC80Q8N2C7 3258 aa10.29□□□□□ -0.76
PTPN11-201ENST00000351677 PRUNE2Q8WUY3 3088 aa10.29□□□□□ -0.76
PTPN11-201ENST00000351677 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
PTPN11-201ENST00000351677 CENPEQ02224 2701 aa10.27□□□□□ -0.76
PTPN11-201ENST00000351677 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
PTPN11-201ENST00000351677 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
PTPN11-201ENST00000351677 ATRQ13535 2644 aa10.25□□□□□ -0.77
PTPN11-201ENST00000351677 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
PTPN11-201ENST00000351677 LINC01600Q96MT4 127 aa10.24□□□□□ -0.77
PTPN11-201ENST00000351677 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
PTPN11-201ENST00000351677 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
PTPN11-201ENST00000351677 IGLV7-43P04211 117 aa10.23□□□□□ -0.77
PTPN11-201ENST00000351677 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
PTPN11-201ENST00000351677 WDFY4Q6ZS81 3184 aa10.22□□□□□ -0.77
PTPN11-201ENST00000351677 CFAP46Q8IYW2 2715 aa10.2□□□□□ -0.78
PTPN11-201ENST00000351677 IGLV5-48A0A075B6I7 105 aa10.2□□□□□ -0.78
PTPN11-201ENST00000351677 XIRP2A4UGR9 3374 aa10.2□□□□□ -0.78
PTPN11-201ENST00000351677 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
PTPN11-201ENST00000351677 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
PTPN11-201ENST00000351677 HELZ2Q9BYK8 2649 aaKnown RBP10.18□□□□□ -0.78
PTPN11-201ENST00000351677 TRIOO75962 3097 aa10.17□□□□□ -0.78
PTPN11-201ENST00000351677 LINC00336Q6ZUF6 198 aa10.16□□□□□ -0.78
PTPN11-201ENST00000351677 CR1P17927 2039 aa10.15□□□□□ -0.78
PTPN11-201ENST00000351677 UQCR11O14957 56 aa10.14□□□□□ -0.79
PTPN11-201ENST00000351677 CDH23Q9H251 3354 aa10.13□□□□□ -0.79
PTPN11-201ENST00000351677 MAST4O15021 2626 aa10.13□□□□□ -0.79
PTPN11-201ENST00000351677 Q8NDZ9 215 aa10.11□□□□□ -0.79
PTPN11-201ENST00000351677 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
PTPN11-201ENST00000351677 MIR22HGQ0VDD5 57 aa10.08□□□□□ -0.8
PTPN11-201ENST00000351677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
PTPN11-201ENST00000351677 J3QL48 77 aa10.06□□□□□ -0.8
PTPN11-201ENST00000351677 ZNF292O60281 2723 aa10.06□□□□□ -0.8
PTPN11-201ENST00000351677 TNP2Q05952 138 aa10.06□□□□□ -0.8
PTPN11-201ENST00000351677 AKAP13Q12802 2813 aa10.05□□□□□ -0.8
PTPN11-201ENST00000351677 VPS13AQ96RL7 3174 aa10.05□□□□□ -0.8
PTPN11-201ENST00000351677 CHD6Q8TD26 2715 aa10.04□□□□□ -0.8
PTPN11-201ENST00000351677 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
PTPN11-201ENST00000351677 Q8N1X5 172 aa10.03□□□□□ -0.8
PTPN11-201ENST00000351677 WIPF1O43516 503 aa10.01□□□□□ -0.81
PTPN11-201ENST00000351677 CELSR3Q9NYQ7 3312 aa9.99□□□□□ -0.81
PTPN11-201ENST00000351677 SPINT4Q6UDR6 99 aa9.99□□□□□ -0.81
PTPN11-201ENST00000351677 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
PTPN11-201ENST00000351677 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
PTPN11-201ENST00000351677 FRYQ5TBA9 3013 aa9.93□□□□□ -0.82
PTPN11-201ENST00000351677 DSPP15924 2871 aaKnown RBP9.92□□□□□ -0.82
PTPN11-201ENST00000351677 MAP1AP78559 2803 aaPredicted RBP9.92□□□□□ -0.82
PTPN11-201ENST00000351677 SPRR1AP35321 89 aa9.91□□□□□ -0.82
PTPN11-201ENST00000351677 TEX15Q9BXT5 2789 aa9.9□□□□□ -0.82
PTPN11-201ENST00000351677 CYSTM1Q9H1C7 97 aa9.9□□□□□ -0.82
PTPN11-201ENST00000351677 CD164Q04900 197 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms