RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
CAPN3-203ENST00000349748 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
CAPN3-203ENST00000349748 NIPBLQ6KC79 2804 aaeCLIP7.14□□□□□ -1.27
CAPN3-203ENST00000349748 IGHV4-28A0A0C4DH34 117 aa7.13□□□□□ -1.27
CAPN3-203ENST00000349748 A6NED7 52 aa7.13□□□□□ -1.27
CAPN3-203ENST00000349748 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-203ENST00000349748 NOP10Q9NPE3 64 aaKnown RBP7.12□□□□□ -1.27
CAPN3-203ENST00000349748 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
CAPN3-203ENST00000349748 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
CAPN3-203ENST00000349748 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
CAPN3-203ENST00000349748 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
CAPN3-203ENST00000349748 FN1P02751 2386 aaKnown RBP7.1□□□□□ -1.27
CAPN3-203ENST00000349748 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
CAPN3-203ENST00000349748 DEFB136Q30KP8 78 aa7.1□□□□□ -1.27
CAPN3-203ENST00000349748 NF1P21359 2839 aa7.09□□□□□ -1.27
CAPN3-203ENST00000349748 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
CAPN3-203ENST00000349748 IGLV10-54A0A075B6I4 117 aa7.09□□□□□ -1.27
CAPN3-203ENST00000349748 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
CAPN3-203ENST00000349748 COX17Q14061 63 aa7.08□□□□□ -1.28
CAPN3-203ENST00000349748 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
CAPN3-203ENST00000349748 B9D2Q9BPU9 175 aa7.08□□□□□ -1.28
CAPN3-203ENST00000349748 SLURP1P55000 103 aa7.08□□□□□ -1.28
CAPN3-203ENST00000349748 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
CAPN3-203ENST00000349748 INAFM1C9JVW0 142 aa7.07□□□□□ -1.28
CAPN3-203ENST00000349748 H3BQ85 93 aa7.07□□□□□ -1.28
CAPN3-203ENST00000349748 IGHV4-30-4P0DP06 118 aa7.07□□□□□ -1.28
CAPN3-203ENST00000349748 UNQ6190/PRO20217Q6UXQ8 127 aa7.06□□□□□ -1.28
CAPN3-203ENST00000349748 FSHBP01225 129 aa7.06□□□□□ -1.28
CAPN3-203ENST00000349748 Q6YL49 198 aa7.05□□□□□ -1.28
CAPN3-203ENST00000349748 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
CAPN3-203ENST00000349748 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-203ENST00000349748 MOBPQ13875 183 aa7.05□□□□□ -1.28
CAPN3-203ENST00000349748 DEFB116Q30KQ4 102 aa7.05□□□□□ -1.28
CAPN3-203ENST00000349748 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
CAPN3-203ENST00000349748 NBEAL2Q6ZNJ1 2754 aa7.04□□□□□ -1.28
CAPN3-203ENST00000349748 Q75L30 129 aa7.04□□□□□ -1.28
CAPN3-203ENST00000349748 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
CAPN3-203ENST00000349748 A0A096LPF7 62 aa7.03□□□□□ -1.28
CAPN3-203ENST00000349748 DNAJC9-AS1A6NH13 148 aa7.03□□□□□ -1.28
CAPN3-203ENST00000349748 K7EQZ3 153 aa7.03□□□□□ -1.28
CAPN3-203ENST00000349748 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
CAPN3-203ENST00000349748 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
CAPN3-203ENST00000349748 ZNF702PQ9H963 129 aa7.02□□□□□ -1.28
CAPN3-203ENST00000349748 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
CAPN3-203ENST00000349748 CCL24O00175 119 aa7.02□□□□□ -1.29
CAPN3-203ENST00000349748 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
CAPN3-203ENST00000349748 MDFIQ99750 246 aa7.02□□□□□ -1.29
CAPN3-203ENST00000349748 NDUFB1O75438 58 aa7.01□□□□□ -1.29
CAPN3-203ENST00000349748 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-203ENST00000349748 DSCR10P59022 87 aa7□□□□□ -1.29
CAPN3-203ENST00000349748 NKAPP1Q8N9T2 125 aa7□□□□□ -1.29
CAPN3-203ENST00000349748 ATRQ13535 2644 aa7□□□□□ -1.29
CAPN3-203ENST00000349748 ODF3L2Q3SX64 289 aa6.99□□□□□ -1.29
CAPN3-203ENST00000349748 ANK3Q12955 4377 aaKnown RBP6.98□□□□□ -1.29
CAPN3-203ENST00000349748 J3QL48 77 aa6.98□□□□□ -1.29
CAPN3-203ENST00000349748 LINC00313P59037 77 aa6.98□□□□□ -1.29
CAPN3-203ENST00000349748 KPRPQ5T749 579 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-203ENST00000349748 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
CAPN3-203ENST00000349748 SPAG11BQ08648 103 aa6.97□□□□□ -1.29
CAPN3-203ENST00000349748 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
CAPN3-203ENST00000349748 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
CAPN3-203ENST00000349748 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.29
CAPN3-203ENST00000349748 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.29
CAPN3-203ENST00000349748 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
CAPN3-203ENST00000349748 MP68P56378 58 aa6.96□□□□□ -1.3
CAPN3-203ENST00000349748 GYPEP15421 78 aa6.95□□□□□ -1.3
CAPN3-203ENST00000349748 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
CAPN3-203ENST00000349748 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
CAPN3-203ENST00000349748 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
CAPN3-203ENST00000349748 DEFB130BP0DP73 79 aa6.94□□□□□ -1.3
CAPN3-203ENST00000349748 DEFB130AP0DP74 79 aa6.94□□□□□ -1.3
CAPN3-203ENST00000349748 SPINK7P58062 85 aa6.94□□□□□ -1.3
CAPN3-203ENST00000349748 Q9BRP9 147 aa6.94□□□□□ -1.3
CAPN3-203ENST00000349748 COA5Q86WW8 74 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 Q8N377 158 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 REG3AQ06141 175 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-203ENST00000349748 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
CAPN3-203ENST00000349748 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-203ENST00000349748 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
CAPN3-203ENST00000349748 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
CAPN3-203ENST00000349748 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
CAPN3-203ENST00000349748 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
CAPN3-203ENST00000349748 IGLV5-48A0A075B6I7 105 aa6.9□□□□□ -1.3
CAPN3-203ENST00000349748 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
CAPN3-203ENST00000349748 C4orf3Q8WVX3 66 aa6.9□□□□□ -1.3
CAPN3-203ENST00000349748 COL6A5A8TX70 2615 aa6.9□□□□□ -1.31
CAPN3-203ENST00000349748 VPREB1P12018 145 aa6.9□□□□□ -1.31
CAPN3-203ENST00000349748 C1orf137Q5JT78 98 aa6.9□□□□□ -1.31
CAPN3-203ENST00000349748 H0Y9P7 68 aa6.89□□□□□ -1.31
CAPN3-203ENST00000349748 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
CAPN3-203ENST00000349748 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
CAPN3-203ENST00000349748 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
CAPN3-203ENST00000349748 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
CAPN3-203ENST00000349748 Q8NBF4 154 aa6.87□□□□□ -1.31
CAPN3-203ENST00000349748 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
CAPN3-203ENST00000349748 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
CAPN3-203ENST00000349748 Q8NAQ8 132 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms