RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 NIPBLQ6KC79 2804 aaeCLIP5.21□□□□□ -1.57
UBE2D3-204ENST00000349311 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 BPY2O14599 106 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 COX17Q14061 63 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 Q8IZM0 81 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 MUC7Q8TAX7 377 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 FN1P02751 2386 aaKnown RBP5.21□□□□□ -1.58
UBE2D3-204ENST00000349311 SORL1Q92673 2214 aa5.2□□□□□ -1.58
UBE2D3-204ENST00000349311 TRGV1A0A0A0MS02 117 aa5.2□□□□□ -1.58
UBE2D3-204ENST00000349311 CD164Q04900 197 aa5.2□□□□□ -1.58
UBE2D3-204ENST00000349311 Q1T7F1 81 aa5.2□□□□□ -1.58
UBE2D3-204ENST00000349311 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
UBE2D3-204ENST00000349311 C4orf3Q8WVX3 66 aa5.19□□□□□ -1.58
UBE2D3-204ENST00000349311 DAD1P61803 113 aa5.18□□□□□ -1.58
UBE2D3-204ENST00000349311 C6orf99Q4VX62 202 aa5.18□□□□□ -1.58
UBE2D3-204ENST00000349311 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
UBE2D3-204ENST00000349311 LYRM9A8MSI8 78 aa5.17□□□□□ -1.58
UBE2D3-204ENST00000349311 C10orf99Q6UWK7 81 aa5.17□□□□□ -1.58
UBE2D3-204ENST00000349311 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
UBE2D3-204ENST00000349311 DNHD1Q96M86 4753 aa5.17□□□□□ -1.58
UBE2D3-204ENST00000349311 IGKV3OR2-268A0A0C4DH90 116 aa5.16□□□□□ -1.58
UBE2D3-204ENST00000349311 LINC00959A0A1B0GUT2 108 aa5.16□□□□□ -1.58
UBE2D3-204ENST00000349311 DEFB114Q30KQ6 69 aa5.16□□□□□ -1.58
UBE2D3-204ENST00000349311 LINC01006Q8NI28 216 aa5.16□□□□□ -1.58
UBE2D3-204ENST00000349311 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
UBE2D3-204ENST00000349311 CUBNO60494 3623 aa5.15□□□□□ -1.58
UBE2D3-204ENST00000349311 CCL24O00175 119 aa5.15□□□□□ -1.59
UBE2D3-204ENST00000349311 PRM2P04554 102 aa5.15□□□□□ -1.59
UBE2D3-204ENST00000349311 COX7BP24311 80 aa5.15□□□□□ -1.59
UBE2D3-204ENST00000349311 SMR3AQ99954 134 aa5.15□□□□□ -1.59
UBE2D3-204ENST00000349311 TRBV6-8A0A0A6YYG3 113 aa5.14□□□□□ -1.59
UBE2D3-204ENST00000349311 M0R2N4 97 aa5.14□□□□□ -1.59
UBE2D3-204ENST00000349311 IGKV4-1P06312 121 aa5.14□□□□□ -1.59
UBE2D3-204ENST00000349311 IGLV4-60A0A075B6I1 120 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 UBE2BP63146 152 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 Q6ZQY7 126 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 SCXQ7RTU7 201 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 MRPL55Q7Z7F7 128 aaKnown RBP5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 STHQ8IWL8 128 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 C16orf74Q96GX8 76 aa5.13□□□□□ -1.59
UBE2D3-204ENST00000349311 ATRQ13535 2644 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 TRGV4A0A0C4DH28 118 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 LCE6AA0A183 80 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 CMC4P56277 68 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 DIRC1Q969H9 104 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 CYP4F30PQ9H0H9 118 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 JMJD1CQ15652 2540 aa5.12□□□□□ -1.59
UBE2D3-204ENST00000349311 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 A0A1B0GW54 56 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 HIGD2AQ9BW72 106 aa5.11□□□□□ -1.59
UBE2D3-204ENST00000349311 TENM1Q9UKZ4 2725 aa5.1□□□□□ -1.59
UBE2D3-204ENST00000349311 DEFB136Q30KP8 78 aa5.1□□□□□ -1.59
UBE2D3-204ENST00000349311 LOC100131303A0A0U1RQF7 123 aa5.09□□□□□ -1.59
UBE2D3-204ENST00000349311 UBE2AP49459 152 aa5.09□□□□□ -1.59
UBE2D3-204ENST00000349311 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
UBE2D3-204ENST00000349311 Q6ZRP5 223 aa5.09□□□□□ -1.59
UBE2D3-204ENST00000349311 NOP10Q9NPE3 64 aaKnown RBP5.09□□□□□ -1.59
UBE2D3-204ENST00000349311 NDUFS5O43920 106 aa5.08□□□□□ -1.6
UBE2D3-204ENST00000349311 NDUFB1O75438 58 aa5.08□□□□□ -1.6
UBE2D3-204ENST00000349311 VPREB1P12018 145 aa5.08□□□□□ -1.6
UBE2D3-204ENST00000349311 C1orf64Q8NEQ6 169 aa5.08□□□□□ -1.6
UBE2D3-204ENST00000349311 RETNQ9HD89 108 aa5.08□□□□□ -1.6
UBE2D3-204ENST00000349311 TRAV22A0A0B4J277 110 aa5.07□□□□□ -1.6
UBE2D3-204ENST00000349311 HIGD2BQ4VC39 106 aa5.07□□□□□ -1.6
UBE2D3-204ENST00000349311 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
UBE2D3-204ENST00000349311 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-204ENST00000349311 VWFP04275 2813 aa5.07□□□□□ -1.6
UBE2D3-204ENST00000349311 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
UBE2D3-204ENST00000349311 IGLV1-51P01701 117 aa5.06□□□□□ -1.6
UBE2D3-204ENST00000349311 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-204ENST00000349311 KRTAP10-3P60369 221 aa5.06□□□□□ -1.6
UBE2D3-204ENST00000349311 NOTCH3Q9UM47 2321 aa5.06□□□□□ -1.6
UBE2D3-204ENST00000349311 A0A087X002 238 aa5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 A0A0J9YWU9 116 aa5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 PSCAO43653 123 aa5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 CHCHD10Q8WYQ3 142 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 CELA1Q9UNI1 258 aa5.05□□□□□ -1.6
UBE2D3-204ENST00000349311 GVQW2A0A096LPI5 108 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 PSPHP1O15172 72 aa5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 SPAG11BQ08648 103 aa5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 KRTAP21-3Q3LHN1 58 aa5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 Q8NDZ9 215 aa5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
UBE2D3-204ENST00000349311 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 STAB1Q9NY15 2570 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 SYCNQ0VAF6 134 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 LINC00269Q8N2A0 174 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 Q8N9L7 120 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 LINC00588Q9Y4M8 146 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 ANK2Q01484 3957 aa5.03□□□□□ -1.6
UBE2D3-204ENST00000349311 M0R378 163 aa5.02□□□□□ -1.61
UBE2D3-204ENST00000349311 C9orf116Q5BN46 136 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms