RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
SCARF1-202ENST00000348987 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
SCARF1-202ENST00000348987 Q6ZTC4 211 aa12.44□□□□□ -0.42
SCARF1-202ENST00000348987 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
SCARF1-202ENST00000348987 V9GYY9 64 aa12.42□□□□□ -0.42
SCARF1-202ENST00000348987 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
SCARF1-202ENST00000348987 HTN3P15516 51 aa12.41□□□□□ -0.42
SCARF1-202ENST00000348987 STAB1Q9NY15 2570 aa12.41□□□□□ -0.42
SCARF1-202ENST00000348987 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
SCARF1-202ENST00000348987 Q8NAQ8 132 aa12.38□□□□□ -0.43
SCARF1-202ENST00000348987 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
SCARF1-202ENST00000348987 KLK12Q9UKR0 248 aa12.37□□□□□ -0.43
SCARF1-202ENST00000348987 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
SCARF1-202ENST00000348987 SEC61GP60059 68 aa12.36□□□□□ -0.43
SCARF1-202ENST00000348987 ANK2Q01484 3957 aa12.34□□□□□ -0.43
SCARF1-202ENST00000348987 FBN1P35555 2871 aaKnown RBP12.34□□□□□ -0.43
SCARF1-202ENST00000348987 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
SCARF1-202ENST00000348987 FAM30AQ9NZY2 134 aa12.33□□□□□ -0.44
SCARF1-202ENST00000348987 APOC4P55056 127 aa12.33□□□□□ -0.44
SCARF1-202ENST00000348987 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-202ENST00000348987 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
SCARF1-202ENST00000348987 MAST4O15021 2626 aa12.31□□□□□ -0.44
SCARF1-202ENST00000348987 SMIM29Q86T20 159 aa12.3□□□□□ -0.44
SCARF1-202ENST00000348987 TENM3Q9P273 2699 aa12.3□□□□□ -0.44
SCARF1-202ENST00000348987 VPREB1P12018 145 aa12.29□□□□□ -0.44
SCARF1-202ENST00000348987 NOTCH1P46531 2555 aa12.29□□□□□ -0.44
SCARF1-202ENST00000348987 hDV103S1A0JD37 113 aa12.28□□□□□ -0.44
SCARF1-202ENST00000348987 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
SCARF1-202ENST00000348987 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
SCARF1-202ENST00000348987 LELP1Q5T871 98 aa12.27□□□□□ -0.45
SCARF1-202ENST00000348987 DEFB105AQ8NG35 78 aa12.27□□□□□ -0.45
SCARF1-202ENST00000348987 Q6ZRP5 223 aa12.25□□□□□ -0.45
SCARF1-202ENST00000348987 M0R378 163 aa12.25□□□□□ -0.45
SCARF1-202ENST00000348987 PRR34Q9NV39 138 aa12.25□□□□□ -0.45
SCARF1-202ENST00000348987 C1orf64Q8NEQ6 169 aa12.24□□□□□ -0.45
SCARF1-202ENST00000348987 RETNQ9HD89 108 aa12.23□□□□□ -0.45
SCARF1-202ENST00000348987 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
SCARF1-202ENST00000348987 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
SCARF1-202ENST00000348987 PSPHP1O15172 72 aa12.2□□□□□ -0.46
SCARF1-202ENST00000348987 Q1T7F1 81 aa12.2□□□□□ -0.46
SCARF1-202ENST00000348987 KPRPQ5T749 579 aaPredicted RBP12.19□□□□□ -0.46
SCARF1-202ENST00000348987 WFDC10BQ8IUB3 73 aa12.19□□□□□ -0.46
SCARF1-202ENST00000348987 Q8N377 158 aa12.19□□□□□ -0.46
SCARF1-202ENST00000348987 COL6A5A8TX70 2615 aa12.18□□□□□ -0.46
SCARF1-202ENST00000348987 LCE6AA0A183 80 aa12.18□□□□□ -0.46
SCARF1-202ENST00000348987 Q6ZRU5 148 aa12.17□□□□□ -0.46
SCARF1-202ENST00000348987 PMAIP1Q13794 54 aa12.17□□□□□ -0.46
SCARF1-202ENST00000348987 PRR4Q16378 134 aa12.17□□□□□ -0.46
SCARF1-202ENST00000348987 KRTAP10-11P60412 298 aa12.16□□□□□ -0.46
SCARF1-202ENST00000348987 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
SCARF1-202ENST00000348987 A0A1W2PNM2 257 aa12.14□□□□□ -0.47
SCARF1-202ENST00000348987 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
SCARF1-202ENST00000348987 ZCCHC13Q8WW36 166 aaKnown RBP12.14□□□□□ -0.47
SCARF1-202ENST00000348987 TRAV22A0A0B4J277 110 aa12.12□□□□□ -0.47
SCARF1-202ENST00000348987 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-202ENST00000348987 PRB2P02812 416 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-202ENST00000348987 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
SCARF1-202ENST00000348987 KRTAP24-1Q3LI83 254 aa12.11□□□□□ -0.47
SCARF1-202ENST00000348987 NBEAL1Q6ZS30 2694 aa12.1□□□□□ -0.47
SCARF1-202ENST00000348987 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
SCARF1-202ENST00000348987 K7EQZ3 153 aa12.09□□□□□ -0.47
SCARF1-202ENST00000348987 DSCR10P59022 87 aa12.09□□□□□ -0.47
SCARF1-202ENST00000348987 KRTAP26-1Q6PEX3 210 aa12.09□□□□□ -0.47
SCARF1-202ENST00000348987 ST20-AS1Q8NBB2 130 aa12.09□□□□□ -0.47
SCARF1-202ENST00000348987 C1orf137Q5JT78 98 aa12.08□□□□□ -0.48
SCARF1-202ENST00000348987 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
SCARF1-202ENST00000348987 KCNQ1DNQ9H478 68 aa12.06□□□□□ -0.48
SCARF1-202ENST00000348987 SERTAD4-AS1Q5TG53 156 aa12.05□□□□□ -0.48
SCARF1-202ENST00000348987 NKAPP1Q8N9T2 125 aa12.05□□□□□ -0.48
SCARF1-202ENST00000348987 A8MU10 97 aa12.04□□□□□ -0.48
SCARF1-202ENST00000348987 A8MUN3 132 aa12.04□□□□□ -0.48
SCARF1-202ENST00000348987 PSCAO43653 123 aa12.04□□□□□ -0.48
SCARF1-202ENST00000348987 Q8NBF4 154 aa12.04□□□□□ -0.48
SCARF1-202ENST00000348987 C7orf33Q8WU49 177 aa12.04□□□□□ -0.48
SCARF1-202ENST00000348987 CYP4F30PQ9H0H9 118 aa12.03□□□□□ -0.48
SCARF1-202ENST00000348987 A0A1B0GW54 56 aa12.03□□□□□ -0.48
SCARF1-202ENST00000348987 TNP2Q05952 138 aa12.02□□□□□ -0.49
SCARF1-202ENST00000348987 Q9BRP9 147 aa12.02□□□□□ -0.49
SCARF1-202ENST00000348987 RPL37AP8A6NKH3 93 aa12.01□□□□□ -0.49
SCARF1-202ENST00000348987 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
SCARF1-202ENST00000348987 Q6ZRX8 168 aa11.99□□□□□ -0.49
SCARF1-202ENST00000348987 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
SCARF1-202ENST00000348987 MGAM2Q2M2H8 2515 aa11.98□□□□□ -0.49
SCARF1-202ENST00000348987 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
SCARF1-202ENST00000348987 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
SCARF1-202ENST00000348987 DEFB116Q30KQ4 102 aa11.98□□□□□ -0.49
SCARF1-202ENST00000348987 BAHCC1Q9P281 2608 aa11.98□□□□□ -0.49
SCARF1-202ENST00000348987 H3BNG1 76 aa11.97□□□□□ -0.49
SCARF1-202ENST00000348987 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
SCARF1-202ENST00000348987 DEFB131BA0A096LNP1 70 aa11.94□□□□□ -0.5
SCARF1-202ENST00000348987 A0A0G2JQZ4 141 aa11.94□□□□□ -0.5
SCARF1-202ENST00000348987 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
SCARF1-202ENST00000348987 Q5VV11 94 aa11.93□□□□□ -0.5
SCARF1-202ENST00000348987 WFDC13Q8IUB5 93 aa11.93□□□□□ -0.5
SCARF1-202ENST00000348987 NDUFB1O75438 58 aa11.93□□□□□ -0.5
SCARF1-202ENST00000348987 KRTAP4-16G5E9R7 235 aaPredicted RBP11.92□□□□□ -0.5
SCARF1-202ENST00000348987 FAM168BA1KXE4 195 aa11.92□□□□□ -0.5
SCARF1-202ENST00000348987 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
SCARF1-202ENST00000348987 LINC01556Q5JQF7 62 aa11.9□□□□□ -0.5
SCARF1-202ENST00000348987 LINC00208Q96KT6 92 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms