RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LINC00476Q8WZB0 136 aa9.77□□□□□ -0.85
NUP50-201ENST00000347635 USP24Q9UPU5 2620 aa9.76□□□□□ -0.85
NUP50-201ENST00000347635 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
NUP50-201ENST00000347635 SPEGQ15772 3267 aa9.75□□□□□ -0.85
NUP50-201ENST00000347635 WIPF1O43516 503 aa9.75□□□□□ -0.85
NUP50-201ENST00000347635 C15orf56Q8N910 161 aa9.75□□□□□ -0.85
NUP50-201ENST00000347635 DSPP15924 2871 aaKnown RBP9.75□□□□□ -0.85
NUP50-201ENST00000347635 FLNAP21333 2647 aaKnown RBP9.74□□□□□ -0.85
NUP50-201ENST00000347635 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
NUP50-201ENST00000347635 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
NUP50-201ENST00000347635 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
NUP50-201ENST00000347635 PCOTHQ58A44 107 aa9.72□□□□□ -0.85
NUP50-201ENST00000347635 IGLV1-50A0A075B6I6 118 aa9.71□□□□□ -0.85
NUP50-201ENST00000347635 ITPR3Q14573 2671 aa9.71□□□□□ -0.85
NUP50-201ENST00000347635 NBEAQ8NFP9 2946 aa9.7□□□□□ -0.86
NUP50-201ENST00000347635 AKAP13Q12802 2813 aa9.7□□□□□ -0.86
NUP50-201ENST00000347635 PMAIP1Q13794 54 aa9.69□□□□□ -0.86
NUP50-201ENST00000347635 K7EQZ3 153 aa9.69□□□□□ -0.86
NUP50-201ENST00000347635 Q8N377 158 aa9.69□□□□□ -0.86
NUP50-201ENST00000347635 C16orf90A8MZG2 172 aa9.68□□□□□ -0.86
NUP50-201ENST00000347635 FRYLO94915 3013 aa9.68□□□□□ -0.86
NUP50-201ENST00000347635 CR1P17927 2039 aa9.67□□□□□ -0.86
NUP50-201ENST00000347635 CFAP46Q8IYW2 2715 aa9.67□□□□□ -0.86
NUP50-201ENST00000347635 FRYQ5TBA9 3013 aa9.66□□□□□ -0.86
NUP50-201ENST00000347635 USP34Q70CQ2 3546 aa9.66□□□□□ -0.86
NUP50-201ENST00000347635 RTL8CO15255 209 aa9.65□□□□□ -0.86
NUP50-201ENST00000347635 H3BPC8 53 aa9.65□□□□□ -0.87
NUP50-201ENST00000347635 LIMD2Q9BT23 127 aa9.65□□□□□ -0.87
NUP50-201ENST00000347635 SEC61GP60059 68 aa9.64□□□□□ -0.87
NUP50-201ENST00000347635 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
NUP50-201ENST00000347635 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
NUP50-201ENST00000347635 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
NUP50-201ENST00000347635 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
NUP50-201ENST00000347635 FREM2Q5SZK8 3169 aa9.62□□□□□ -0.87
NUP50-201ENST00000347635 TLX1NBP0CAT3 122 aa9.61□□□□□ -0.87
NUP50-201ENST00000347635 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
NUP50-201ENST00000347635 EYSQ5T1H1 3165 aa9.61□□□□□ -0.87
NUP50-201ENST00000347635 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
NUP50-201ENST00000347635 Q8NDZ9 215 aa9.6□□□□□ -0.87
NUP50-201ENST00000347635 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
NUP50-201ENST00000347635 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
NUP50-201ENST00000347635 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
NUP50-201ENST00000347635 COL6A3P12111 3177 aa9.6□□□□□ -0.87
NUP50-201ENST00000347635 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
NUP50-201ENST00000347635 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
NUP50-201ENST00000347635 APLNQ9ULZ1 77 aa9.57□□□□□ -0.88
NUP50-201ENST00000347635 A0A1W2PNM2 257 aa9.56□□□□□ -0.88
NUP50-201ENST00000347635 A8MWP4 228 aa9.56□□□□□ -0.88
NUP50-201ENST00000347635 IGLV5-48A0A075B6I7 105 aa9.56□□□□□ -0.88
NUP50-201ENST00000347635 CHTF8P0CG12 524 aa9.53□□□□□ -0.88
NUP50-201ENST00000347635 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
NUP50-201ENST00000347635 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
NUP50-201ENST00000347635 OCR1Q9BZK8 76 aa9.52□□□□□ -0.88
NUP50-201ENST00000347635 MOBPQ13875 183 aa9.51□□□□□ -0.89
NUP50-201ENST00000347635 A0A0G2JQZ4 141 aa9.51□□□□□ -0.89
NUP50-201ENST00000347635 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
NUP50-201ENST00000347635 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
NUP50-201ENST00000347635 Q5XG85 94 aa9.49□□□□□ -0.89
NUP50-201ENST00000347635 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
NUP50-201ENST00000347635 RETNLBQ9BQ08 111 aa9.49□□□□□ -0.89
NUP50-201ENST00000347635 BOD1L1Q8NFC6 3051 aa9.48□□□□□ -0.89
NUP50-201ENST00000347635 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
NUP50-201ENST00000347635 ATRQ13535 2644 aa9.48□□□□□ -0.89
NUP50-201ENST00000347635 A0A087WTM6 91 aa9.48□□□□□ -0.89
NUP50-201ENST00000347635 A8MUN3 132 aa9.47□□□□□ -0.89
NUP50-201ENST00000347635 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
NUP50-201ENST00000347635 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.89
NUP50-201ENST00000347635 CENPEQ02224 2701 aa9.46□□□□□ -0.89
NUP50-201ENST00000347635 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
NUP50-201ENST00000347635 UNC79Q9P2D8 2635 aa9.44□□□□□ -0.9
NUP50-201ENST00000347635 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
NUP50-201ENST00000347635 ADGRG4Q8IZF6 3080 aa9.43□□□□□ -0.9
NUP50-201ENST00000347635 COA5Q86WW8 74 aa9.43□□□□□ -0.9
NUP50-201ENST00000347635 MGAM2Q2M2H8 2515 aa9.43□□□□□ -0.9
NUP50-201ENST00000347635 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
NUP50-201ENST00000347635 DSCR10P59022 87 aa9.41□□□□□ -0.9
NUP50-201ENST00000347635 TNRC18O15417 2968 aaPredicted RBP9.41□□□□□ -0.9
NUP50-201ENST00000347635 MAST4O15021 2626 aa9.4□□□□□ -0.9
NUP50-201ENST00000347635 ACYP2P14621 99 aa9.4□□□□□ -0.9
NUP50-201ENST00000347635 KALRNO60229 2985 aa9.4□□□□□ -0.91
NUP50-201ENST00000347635 OXTP01178 125 aa9.39□□□□□ -0.91
NUP50-201ENST00000347635 LRBAP50851 2863 aa9.39□□□□□ -0.91
NUP50-201ENST00000347635 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
NUP50-201ENST00000347635 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
NUP50-201ENST00000347635 C8orf17Q9NRJ1 99 aa9.36□□□□□ -0.91
NUP50-201ENST00000347635 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
NUP50-201ENST00000347635 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
NUP50-201ENST00000347635 SPANXA2-OT1Q8N9U9 137 aa9.35□□□□□ -0.91
NUP50-201ENST00000347635 TYMSOSQ8TAI1 123 aa9.34□□□□□ -0.91
NUP50-201ENST00000347635 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
NUP50-201ENST00000347635 A0A1B0GU69 56 aa9.33□□□□□ -0.92
NUP50-201ENST00000347635 Q1T7F1 81 aa9.33□□□□□ -0.92
NUP50-201ENST00000347635 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
NUP50-201ENST00000347635 K7ERS5 55 aa9.32□□□□□ -0.92
NUP50-201ENST00000347635 SPRR1AP35321 89 aa9.32□□□□□ -0.92
NUP50-201ENST00000347635 ZNF861PO60384 105 aa9.31□□□□□ -0.92
NUP50-201ENST00000347635 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
NUP50-201ENST00000347635 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
NUP50-201ENST00000347635 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
NUP50-201ENST00000347635 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms