RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 A0A096LNT2 108 aa15.02□□□□□ -0.01
NPAS3-201ENST00000346562 SPRR4Q96PI1 79 aa15.02□□□□□ -0.01
NPAS3-201ENST00000346562 GIG44P09565 113 aaPredicted RBP15□□□□□ -0.01
NPAS3-201ENST00000346562 CNBPP62633 177 aaKnown RBP15□□□□□ -0.01
NPAS3-201ENST00000346562 ANAPC11Q9NYG5 84 aa15□□□□□ -0.01
NPAS3-201ENST00000346562 ZNF575Q86XF7 245 aa14.99□□□□□ -0.01
NPAS3-201ENST00000346562 JMJD1CQ15652 2540 aa14.99□□□□□ -0.01
NPAS3-201ENST00000346562 A0A1W2PNN7 141 aa14.97□□□□□ -0.01
NPAS3-201ENST00000346562 A0A0G2JQZ4 141 aa14.95□□□□□ -0.02
NPAS3-201ENST00000346562 ABCA12Q86UK0 2595 aa14.94□□□□□ -0.02
NPAS3-201ENST00000346562 TLN1Q9Y490 2541 aaKnown RBP14.94□□□□□ -0.02
NPAS3-201ENST00000346562 KLKP1Q107X0 134 aa14.94□□□□□ -0.02
NPAS3-201ENST00000346562 PCSK5Q92824 1860 aa14.93□□□□□ -0.02
NPAS3-201ENST00000346562 LINC01554Q52M75 96 aa14.91□□□□□ -0.02
NPAS3-201ENST00000346562 EIF4EBP3O60516 100 aaPredicted RBP14.9□□□□□ -0.02
NPAS3-201ENST00000346562 FAM104AQ969W3 186 aa14.89□□□□□ -0.03
NPAS3-201ENST00000346562 CDC42SE1Q9NRR8 79 aa14.89□□□□□ -0.03
NPAS3-201ENST00000346562 IGLV5-48A0A075B6I7 105 aa14.86□□□□□ -0.03
NPAS3-201ENST00000346562 CASC10Q5T4H9 136 aa14.85□□□□□ -0.03
NPAS3-201ENST00000346562 A0A0D9SG42 100 aa14.83□□□□□ -0.04
NPAS3-201ENST00000346562 Q8N1X5 172 aa14.82□□□□□ -0.04
NPAS3-201ENST00000346562 FN1P02751 2386 aaKnown RBP14.81□□□□□ -0.04
NPAS3-201ENST00000346562 SPANXA2-OT1Q8N9U9 137 aa14.8□□□□□ -0.04
NPAS3-201ENST00000346562 Q6ZSA8 131 aa14.8□□□□□ -0.04
NPAS3-201ENST00000346562 A0A1W2PNM2 257 aa14.77□□□□□ -0.04
NPAS3-201ENST00000346562 CD164Q04900 197 aa14.77□□□□□ -0.05
NPAS3-201ENST00000346562 ZFYVE26Q68DK2 2539 aa14.74□□□□□ -0.05
NPAS3-201ENST00000346562 H7BZZ5 65 aa14.72□□□□□ -0.05
NPAS3-201ENST00000346562 KRTAP1-3Q8IUG1 177 aa14.69□□□□□ -0.06
NPAS3-201ENST00000346562 IGLV7-46A0A075B6I9 117 aa14.67□□□□□ -0.06
NPAS3-201ENST00000346562 USP9XQ93008 2570 aaPredicted RBP14.67□□□□□ -0.06
NPAS3-201ENST00000346562 ZNF462Q96JM2 2506 aa14.67□□□□□ -0.06
NPAS3-201ENST00000346562 EP400Q96L91 3159 aa14.66□□□□□ -0.06
NPAS3-201ENST00000346562 TNP2Q05952 138 aa14.65□□□□□ -0.06
NPAS3-201ENST00000346562 KTN1-AS1Q86SY8 53 aa14.64□□□□□ -0.07
NPAS3-201ENST00000346562 KRTAP1-1Q07627 177 aa14.62□□□□□ -0.07
NPAS3-201ENST00000346562 PRR26Q8N8Z3 221 aa14.61□□□□□ -0.07
NPAS3-201ENST00000346562 LCA10Q71F78 164 aa14.61□□□□□ -0.07
NPAS3-201ENST00000346562 M0R2T5 61 aa14.59□□□□□ -0.07
NPAS3-201ENST00000346562 TLN2Q9Y4G6 2542 aa14.58□□□□□ -0.08
NPAS3-201ENST00000346562 CAMK2N1Q7Z7J9 78 aa14.57□□□□□ -0.08
NPAS3-201ENST00000346562 LUZP6Q538Z0 58 aa14.57□□□□□ -0.08
NPAS3-201ENST00000346562 LINC00483Q53H64 154 aa14.54□□□□□ -0.08
NPAS3-201ENST00000346562 FAM229BQ4G0N7 80 aa14.54□□□□□ -0.08
NPAS3-201ENST00000346562 ANKRD11Q6UB99 2663 aaPredicted RBP14.54□□□□□ -0.08
NPAS3-201ENST00000346562 ANKRD17O75179 2603 aaKnown RBP14.5□□□□□ -0.09
NPAS3-201ENST00000346562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.49□□□□□ -0.09
NPAS3-201ENST00000346562 Q1T7F1 81 aa14.47□□□□□ -0.09
NPAS3-201ENST00000346562 A0A1B0GU33 70 aa14.44□□□□□ -0.1
NPAS3-201ENST00000346562 OCR1Q9BZK8 76 aa14.4□□□□□ -0.1
NPAS3-201ENST00000346562 HRES1P13985 223 aa14.4□□□□□ -0.1
NPAS3-201ENST00000346562 CEP295Q9C0D2 2601 aa14.39□□□□□ -0.11
NPAS3-201ENST00000346562 PKD1L2Q7Z442 2459 aa14.39□□□□□ -0.11
NPAS3-201ENST00000346562 PLAC8Q9NZF1 115 aa14.39□□□□□ -0.11
NPAS3-201ENST00000346562 ZCCHC13Q8WW36 166 aaKnown RBP14.38□□□□□ -0.11
NPAS3-201ENST00000346562 S4R3F8 94 aa14.38□□□□□ -0.11
NPAS3-201ENST00000346562 F8P00451 2351 aa14.36□□□□□ -0.11
NPAS3-201ENST00000346562 USP9YO00507 2555 aaPredicted RBP14.36□□□□□ -0.11
NPAS3-201ENST00000346562 CSAG1Q6PB30 78 aa14.35□□□□□ -0.11
NPAS3-201ENST00000346562 SETD2Q9BYW2 2564 aaPredicted RBP14.34□□□□□ -0.11
NPAS3-201ENST00000346562 WIPF1O43516 503 aa14.28□□□□□ -0.12
NPAS3-201ENST00000346562 DMAC1Q96GE9 116 aa14.26□□□□□ -0.13
NPAS3-201ENST00000346562 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
NPAS3-201ENST00000346562 MTORP42345 2549 aa14.25□□□□□ -0.13
NPAS3-201ENST00000346562 WDR87Q6ZQQ6 2873 aa14.24□□□□□ -0.13
NPAS3-201ENST00000346562 MMP24-AS1A0A0U1RRL7 71 aa14.24□□□□□ -0.13
NPAS3-201ENST00000346562 SRCAPQ6ZRS2 3230 aa14.23□□□□□ -0.13
NPAS3-201ENST00000346562 Q75L30 129 aa14.22□□□□□ -0.13
NPAS3-201ENST00000346562 SEC61BP60468 96 aaKnown RBP14.2□□□□□ -0.14
NPAS3-201ENST00000346562 POLQO75417 2590 aa14.15□□□□□ -0.14
NPAS3-201ENST00000346562 SPRR1AP35321 89 aa14.14□□□□□ -0.15
NPAS3-201ENST00000346562 SPTBN4Q9H254 2564 aa14.13□□□□□ -0.15
NPAS3-201ENST00000346562 LINC01558Q9Y6Z2 57 aa14.13□□□□□ -0.15
NPAS3-201ENST00000346562 Q8N9P0 234 aaPredicted RBP14.12□□□□□ -0.15
NPAS3-201ENST00000346562 ACANP16112 2415 aa14.11□□□□□ -0.15
NPAS3-201ENST00000346562 Q5W150 140 aa14.1□□□□□ -0.15
NPAS3-201ENST00000346562 Q5VSD8 79 aa14.1□□□□□ -0.15
NPAS3-201ENST00000346562 GOLGB1Q14789 3259 aaKnown RBP14.09□□□□□ -0.15
NPAS3-201ENST00000346562 R4GN34 69 aa14.09□□□□□ -0.15
NPAS3-201ENST00000346562 SPRR1BP22528 89 aa14.08□□□□□ -0.16
NPAS3-201ENST00000346562 SPINK7P58062 85 aa14.06□□□□□ -0.16
NPAS3-201ENST00000346562 FASNP49327 2511 aaKnown RBP14.06□□□□□ -0.16
NPAS3-201ENST00000346562 LINC00472Q9H8W2 130 aa13.99□□□□□ -0.17
NPAS3-201ENST00000346562 LCE6AA0A183 80 aa13.96□□□□□ -0.17
NPAS3-201ENST00000346562 Q8NDZ9 215 aa13.94□□□□□ -0.18
NPAS3-201ENST00000346562 CR1P17927 2039 aa13.94□□□□□ -0.18
NPAS3-201ENST00000346562 KRTAP10-1P60331 282 aa13.86□□□□□ -0.19
NPAS3-201ENST00000346562 KRTAP1-5Q9BYS1 174 aa13.85□□□□□ -0.19
NPAS3-201ENST00000346562 FP248Q71RG6 208 aaPredicted RBP13.84□□□□□ -0.19
NPAS3-201ENST00000346562 A0A0A0MQY5 61 aa13.84□□□□□ -0.19
NPAS3-201ENST00000346562 OXTP01178 125 aa13.81□□□□□ -0.2
NPAS3-201ENST00000346562 M0QZ58 72 aa13.81□□□□□ -0.2
NPAS3-201ENST00000346562 KRTAP26-1Q6PEX3 210 aa13.81□□□□□ -0.2
NPAS3-201ENST00000346562 RPL37P61927 97 aaKnown RBP13.79□□□□□ -0.2
NPAS3-201ENST00000346562 KRTAP10-2P60368 255 aa13.77□□□□□ -0.2
NPAS3-201ENST00000346562 Q5VV11 94 aa13.76□□□□□ -0.21
NPAS3-201ENST00000346562 PLAC4Q8WY50 150 aa13.76□□□□□ -0.21
NPAS3-201ENST00000346562 ROMO1P60602 79 aa13.75□□□□□ -0.21
NPAS3-201ENST00000346562 PRAC1Q96KF2 57 aa13.74□□□□□ -0.21
NPAS3-201ENST00000346562 H1FX-AS1Q4G0G2 97 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms