RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 NPC2P61916 151 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
CKLF-202ENST00000345436 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 MOBPQ13875 183 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 Q9BRP9 147 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
CKLF-202ENST00000345436 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
CKLF-202ENST00000345436 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
CKLF-202ENST00000345436 SLC25A34Q6PIV7 304 aa10.13□□□□□ -0.79
CKLF-202ENST00000345436 LINC00518Q8N0U6 118 aa10.13□□□□□ -0.79
CKLF-202ENST00000345436 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
CKLF-202ENST00000345436 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
CKLF-202ENST00000345436 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
CKLF-202ENST00000345436 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
CKLF-202ENST00000345436 SLC25A20O43772 301 aa10.11□□□□□ -0.79
CKLF-202ENST00000345436 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
CKLF-202ENST00000345436 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
CKLF-202ENST00000345436 C20orf202A1L168 122 aa10.1□□□□□ -0.79
CKLF-202ENST00000345436 AKR1D1P51857 326 aa10.1□□□□□ -0.79
CKLF-202ENST00000345436 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
CKLF-202ENST00000345436 MUC2Q02817 5179 aa10.08□□□□□ -0.8
CKLF-202ENST00000345436 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
CKLF-202ENST00000345436 KRTDAPP60985 99 aa10.07□□□□□ -0.8
CKLF-202ENST00000345436 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
CKLF-202ENST00000345436 LITAFQ99732 161 aa10.07□□□□□ -0.8
CKLF-202ENST00000345436 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
CKLF-202ENST00000345436 KRTAP13-3Q3SY46 172 aa10.04□□□□□ -0.8
CKLF-202ENST00000345436 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
CKLF-202ENST00000345436 Q8N377 158 aa10.04□□□□□ -0.8
CKLF-202ENST00000345436 LAMTOR3Q9UHA4 124 aa10.04□□□□□ -0.8
CKLF-202ENST00000345436 COX7BP24311 80 aa10.03□□□□□ -0.8
CKLF-202ENST00000345436 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
CKLF-202ENST00000345436 IFITM1P13164 125 aa10.02□□□□□ -0.81
CKLF-202ENST00000345436 SEC61BP60468 96 aaKnown RBP10.02□□□□□ -0.81
CKLF-202ENST00000345436 Q6ZVH6 145 aa10.02□□□□□ -0.81
CKLF-202ENST00000345436 SPRR1BP22528 89 aa10□□□□□ -0.81
CKLF-202ENST00000345436 TAL2Q16559 108 aa10□□□□□ -0.81
CKLF-202ENST00000345436 C6orf99Q4VX62 202 aa10□□□□□ -0.81
CKLF-202ENST00000345436 LIMD2Q9BT23 127 aa10□□□□□ -0.81
CKLF-202ENST00000345436 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
CKLF-202ENST00000345436 ELOF1P60002 83 aaKnown RBP9.99□□□□□ -0.81
CKLF-202ENST00000345436 SNRPEP62304 92 aaKnown RBP9.98□□□□□ -0.81
CKLF-202ENST00000345436 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
CKLF-202ENST00000345436 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
CKLF-202ENST00000345436 A6NDN8 102 aa9.96□□□□□ -0.82
CKLF-202ENST00000345436 TEX49A0A1B0GTD5 131 aa9.95□□□□□ -0.82
CKLF-202ENST00000345436 A0A1B0GWB2 263 aa9.95□□□□□ -0.82
CKLF-202ENST00000345436 A4D1N5 150 aa9.95□□□□□ -0.82
CKLF-202ENST00000345436 DEFB105AQ8NG35 78 aa9.94□□□□□ -0.82
CKLF-202ENST00000345436 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
CKLF-202ENST00000345436 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
CKLF-202ENST00000345436 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
CKLF-202ENST00000345436 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
CKLF-202ENST00000345436 CD164Q04900 197 aa9.91□□□□□ -0.82
CKLF-202ENST00000345436 MUSTN1Q8IVN3 82 aa9.91□□□□□ -0.82
CKLF-202ENST00000345436 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
CKLF-202ENST00000345436 HSBP1L1C9JCN9 74 aa9.9□□□□□ -0.82
CKLF-202ENST00000345436 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
CKLF-202ENST00000345436 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.82
CKLF-202ENST00000345436 H7C2G1 150 aa9.89□□□□□ -0.83
CKLF-202ENST00000345436 S100A2P29034 98 aa9.89□□□□□ -0.83
CKLF-202ENST00000345436 VAMP3Q15836 100 aa9.89□□□□□ -0.83
CKLF-202ENST00000345436 Q1RN00 199 aa9.89□□□□□ -0.83
CKLF-202ENST00000345436 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
CKLF-202ENST00000345436 XP32Q5T750 250 aa9.87□□□□□ -0.83
CKLF-202ENST00000345436 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
CKLF-202ENST00000345436 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
CKLF-202ENST00000345436 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
CKLF-202ENST00000345436 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
CKLF-202ENST00000345436 IGLV5-48A0A075B6I7 105 aa9.83□□□□□ -0.84
CKLF-202ENST00000345436 S100A6P06703 90 aa9.82□□□□□ -0.84
CKLF-202ENST00000345436 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
CKLF-202ENST00000345436 F8WEM9 126 aa9.81□□□□□ -0.84
CKLF-202ENST00000345436 Q5XG85 94 aa9.8□□□□□ -0.84
CKLF-202ENST00000345436 S100A1P23297 94 aa9.79□□□□□ -0.84
CKLF-202ENST00000345436 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
CKLF-202ENST00000345436 TCL1BO95988 128 aa9.78□□□□□ -0.84
CKLF-202ENST00000345436 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
CKLF-202ENST00000345436 HIST1H2BLQ99880 126 aa9.78□□□□□ -0.84
CKLF-202ENST00000345436 KRTAP9-2Q9BYQ4 174 aa9.75□□□□□ -0.85
CKLF-202ENST00000345436 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
CKLF-202ENST00000345436 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
CKLF-202ENST00000345436 LINC00575Q6W349 94 aa9.73□□□□□ -0.85
CKLF-202ENST00000345436 SNCGO76070 127 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 Q6JHZ5 121 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 HIST1H4GQ99525 98 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 KRTAP4-1Q9BYQ7 146 aa9.71□□□□□ -0.86
CKLF-202ENST00000345436 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
CKLF-202ENST00000345436 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms