RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 NCR3O14931 201 aa7.29□□□□□ -1.24
SNCA-202ENST00000345009 DLEU1O43261 78 aa7.29□□□□□ -1.24
SNCA-202ENST00000345009 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
SNCA-202ENST00000345009 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
SNCA-202ENST00000345009 PPDPFQ9H3Y8 114 aa7.29□□□□□ -1.24
SNCA-202ENST00000345009 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 BCE1O60756 84 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 PYY3Q5JQD4 70 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 REG3GQ6UW15 175 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 KRTAP11-1Q8IUC1 163 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 DIRC1Q969H9 104 aa7.28□□□□□ -1.24
SNCA-202ENST00000345009 DDTP30046 118 aa7.27□□□□□ -1.25
SNCA-202ENST00000345009 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
SNCA-202ENST00000345009 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
SNCA-202ENST00000345009 SOSTDC1Q6X4U4 206 aa7.27□□□□□ -1.25
SNCA-202ENST00000345009 Q8NDZ9 215 aa7.27□□□□□ -1.25
SNCA-202ENST00000345009 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
SNCA-202ENST00000345009 UBE2AP49459 152 aa7.26□□□□□ -1.25
SNCA-202ENST00000345009 C14orf144Q96I85 54 aa7.26□□□□□ -1.25
SNCA-202ENST00000345009 TMEM126AQ9H061 195 aa7.26□□□□□ -1.25
SNCA-202ENST00000345009 TRBV10-3A0A0K0K1G6 114 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 PRYO14603 147 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 ZNF861PO60384 105 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 MUSTN1Q8IVN3 82 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 OR13C6PQ8NH95 151 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 KCNQ1DNQ9H478 68 aa7.25□□□□□ -1.25
SNCA-202ENST00000345009 HNRNPA3P51991 378 aaKnown RBP7.24□□□□□ -1.25
SNCA-202ENST00000345009 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
SNCA-202ENST00000345009 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
SNCA-202ENST00000345009 HIST1H4GQ99525 98 aa7.24□□□□□ -1.25
SNCA-202ENST00000345009 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SNCA-202ENST00000345009 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
SNCA-202ENST00000345009 OXTP01178 125 aa7.23□□□□□ -1.25
SNCA-202ENST00000345009 IGLV6-57P01721 117 aa7.23□□□□□ -1.25
SNCA-202ENST00000345009 HINT1P49773 126 aaPredicted RBP7.23□□□□□ -1.25
SNCA-202ENST00000345009 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
SNCA-202ENST00000345009 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
SNCA-202ENST00000345009 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
SNCA-202ENST00000345009 TRAV23DV6A0A075B6W5 121 aa7.21□□□□□ -1.26
SNCA-202ENST00000345009 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.26
SNCA-202ENST00000345009 H0Y9J4 135 aa7.21□□□□□ -1.26
SNCA-202ENST00000345009 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
SNCA-202ENST00000345009 A6NDN8 102 aa7.2□□□□□ -1.26
SNCA-202ENST00000345009 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
SNCA-202ENST00000345009 ZNF73O43830 326 aaPredicted RBP7.19□□□□□ -1.26
SNCA-202ENST00000345009 SPRR1AP35321 89 aa7.19□□□□□ -1.26
SNCA-202ENST00000345009 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
SNCA-202ENST00000345009 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
SNCA-202ENST00000345009 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
SNCA-202ENST00000345009 PRLHP81277 87 aa7.18□□□□□ -1.26
SNCA-202ENST00000345009 TAL2Q16559 108 aa7.18□□□□□ -1.26
SNCA-202ENST00000345009 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
SNCA-202ENST00000345009 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
SNCA-202ENST00000345009 A4D1N5 150 aa7.17□□□□□ -1.26
SNCA-202ENST00000345009 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
SNCA-202ENST00000345009 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
SNCA-202ENST00000345009 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
SNCA-202ENST00000345009 B5MCH6 92 aa7.15□□□□□ -1.26
SNCA-202ENST00000345009 KRTAP4-16G5E9R7 235 aaPredicted RBP7.15□□□□□ -1.26
SNCA-202ENST00000345009 C2orf91Q6ZV80 131 aa7.15□□□□□ -1.26
SNCA-202ENST00000345009 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
SNCA-202ENST00000345009 VAMP3Q15836 100 aa7.14□□□□□ -1.27
SNCA-202ENST00000345009 Q6ZRX8 168 aa7.14□□□□□ -1.27
SNCA-202ENST00000345009 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
SNCA-202ENST00000345009 CEND1Q8N111 149 aa7.13□□□□□ -1.27
SNCA-202ENST00000345009 RAB37Q96AX2 223 aa7.13□□□□□ -1.27
SNCA-202ENST00000345009 COX7BP24311 80 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
SNCA-202ENST00000345009 HSD52Q0P140 79 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 DHRS4-AS1Q9P1J3 65 aa7.12□□□□□ -1.27
SNCA-202ENST00000345009 C12orf57Q99622 126 aa7.11□□□□□ -1.27
SNCA-202ENST00000345009 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
SNCA-202ENST00000345009 A0A1B0GWB2 263 aa7.1□□□□□ -1.27
SNCA-202ENST00000345009 CRYGAP11844 174 aa7.1□□□□□ -1.27
SNCA-202ENST00000345009 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
SNCA-202ENST00000345009 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
SNCA-202ENST00000345009 CFC1BP0CG36 223 aa7.09□□□□□ -1.27
SNCA-202ENST00000345009 CFC1P0CG37 223 aa7.09□□□□□ -1.27
SNCA-202ENST00000345009 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
SNCA-202ENST00000345009 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
SNCA-202ENST00000345009 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
SNCA-202ENST00000345009 SLC25A20O43772 301 aa7.08□□□□□ -1.28
SNCA-202ENST00000345009 KRTAP1-4P0C5Y4 121 aa7.08□□□□□ -1.28
SNCA-202ENST00000345009 ELOF1P60002 83 aaKnown RBP7.08□□□□□ -1.28
SNCA-202ENST00000345009 Q9BRP9 147 aa7.08□□□□□ -1.28
SNCA-202ENST00000345009 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
SNCA-202ENST00000345009 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
SNCA-202ENST00000345009 SNCGO76070 127 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 SPRR4Q96PI1 79 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 PRO1854Q9UHT4 67 aa7.07□□□□□ -1.28
SNCA-202ENST00000345009 H7C2G1 150 aa7.06□□□□□ -1.28
SNCA-202ENST00000345009 Q1RN00 199 aa7.06□□□□□ -1.28
SNCA-202ENST00000345009 FAT3Q8TDW7 4589 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms