RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TRBV7-4A0A0J9YYF1 115 aa13.92□□□□□ -0.18
CCDC38-201ENST00000344280 RPS28P62857 69 aaKnown RBP13.92□□□□□ -0.18
CCDC38-201ENST00000344280 FAM168BA1KXE4 195 aa13.91□□□□□ -0.18
CCDC38-201ENST00000344280 NKAPP1Q8N9T2 125 aa13.91□□□□□ -0.18
CCDC38-201ENST00000344280 J3KT08 172 aa13.9□□□□□ -0.18
CCDC38-201ENST00000344280 CRYGAP11844 174 aa13.89□□□□□ -0.19
CCDC38-201ENST00000344280 Q6ZVQ6 151 aa13.89□□□□□ -0.19
CCDC38-201ENST00000344280 C5orf47Q569G3 176 aa13.89□□□□□ -0.19
CCDC38-201ENST00000344280 KCNQ1DNQ9H478 68 aa13.89□□□□□ -0.19
CCDC38-201ENST00000344280 CYSTM1Q9H1C7 97 aa13.88□□□□□ -0.19
CCDC38-201ENST00000344280 LINC01547P58512 204 aaPredicted RBP13.88□□□□□ -0.19
CCDC38-201ENST00000344280 UPK3BQ9BT76 320 aa13.88□□□□□ -0.19
CCDC38-201ENST00000344280 PDE6GP18545 87 aa13.87□□□□□ -0.19
CCDC38-201ENST00000344280 STAB2Q8WWQ8 2551 aa13.87□□□□□ -0.19
CCDC38-201ENST00000344280 TLX1NBP0CAT3 122 aa13.87□□□□□ -0.19
CCDC38-201ENST00000344280 RPL37AP8A6NKH3 93 aa13.86□□□□□ -0.19
CCDC38-201ENST00000344280 HAMPP81172 84 aa13.86□□□□□ -0.19
CCDC38-201ENST00000344280 KRTAP7-1Q8IUC3 87 aa13.85□□□□□ -0.19
CCDC38-201ENST00000344280 SERP2Q8N6R1 65 aa13.85□□□□□ -0.19
CCDC38-201ENST00000344280 DNAH10Q8IVF4 4471 aa13.85□□□□□ -0.19
CCDC38-201ENST00000344280 COL7A1Q02388 2944 aa13.84□□□□□ -0.19
CCDC38-201ENST00000344280 GHRHP01286 108 aa13.83□□□□□ -0.2
CCDC38-201ENST00000344280 DEFB105AQ8NG35 78 aa13.81□□□□□ -0.2
CCDC38-201ENST00000344280 PLA2G2DQ9UNK4 145 aa13.8□□□□□ -0.2
CCDC38-201ENST00000344280 SCXQ7RTU7 201 aa13.78□□□□□ -0.2
CCDC38-201ENST00000344280 FAM19A5Q7Z5A7 132 aaPredicted RBP13.78□□□□□ -0.2
CCDC38-201ENST00000344280 Q8N377 158 aa13.78□□□□□ -0.2
CCDC38-201ENST00000344280 IGLV1-50A0A075B6I6 118 aa13.78□□□□□ -0.2
CCDC38-201ENST00000344280 LOC107984640A0A0U1RRK4 108 aa13.78□□□□□ -0.2
CCDC38-201ENST00000344280 KRTAP4-16G5E9R7 235 aaPredicted RBP13.78□□□□□ -0.2
CCDC38-201ENST00000344280 Q9BRP9 147 aa13.78□□□□□ -0.2
CCDC38-201ENST00000344280 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
CCDC38-201ENST00000344280 Q6ZRX8 168 aa13.76□□□□□ -0.21
CCDC38-201ENST00000344280 RMI2Q96E14 147 aa13.76□□□□□ -0.21
CCDC38-201ENST00000344280 DNAH9Q9NYC9 4486 aa13.75□□□□□ -0.21
CCDC38-201ENST00000344280 IGLV5-37A0A075B6J1 123 aa13.75□□□□□ -0.21
CCDC38-201ENST00000344280 TMEM258P61165 79 aa13.74□□□□□ -0.21
CCDC38-201ENST00000344280 CXCL6P80162 114 aa13.74□□□□□ -0.21
CCDC38-201ENST00000344280 SPRR1AP35321 89 aa13.73□□□□□ -0.21
CCDC38-201ENST00000344280 ST20-AS1Q8NBB2 130 aa13.71□□□□□ -0.21
CCDC38-201ENST00000344280 PRYO14603 147 aa13.71□□□□□ -0.21
CCDC38-201ENST00000344280 MRPL55Q7Z7F7 128 aaKnown RBP13.71□□□□□ -0.21
CCDC38-201ENST00000344280 DNAH7Q8WXX0 4024 aa13.7□□□□□ -0.22
CCDC38-201ENST00000344280 TENM2Q9NT68 2774 aa13.69□□□□□ -0.22
CCDC38-201ENST00000344280 CSMD3Q7Z407 3707 aa13.69□□□□□ -0.22
CCDC38-201ENST00000344280 ETDCA0A1B0GVM5 59 aa13.69□□□□□ -0.22
CCDC38-201ENST00000344280 DHRS4-AS1Q9P1J3 65 aa13.69□□□□□ -0.22
CCDC38-201ENST00000344280 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
CCDC38-201ENST00000344280 ERC2-IT1O76042 136 aa13.67□□□□□ -0.22
CCDC38-201ENST00000344280 IGLV5-48A0A075B6I7 105 aa13.66□□□□□ -0.22
CCDC38-201ENST00000344280 DPH3Q96FX2 82 aa13.66□□□□□ -0.22
CCDC38-201ENST00000344280 Q8N9L7 120 aa13.65□□□□□ -0.22
CCDC38-201ENST00000344280 A0A096LNI7 61 aa13.62□□□□□ -0.23
CCDC38-201ENST00000344280 IGKV2-24A0A0C4DH68 120 aa13.61□□□□□ -0.23
CCDC38-201ENST00000344280 TNP2Q05952 138 aa13.61□□□□□ -0.23
CCDC38-201ENST00000344280 C20orf197Q8N268 126 aa13.61□□□□□ -0.23
CCDC38-201ENST00000344280 UBE2BP63146 152 aa13.6□□□□□ -0.23
CCDC38-201ENST00000344280 NREPQ16612 68 aa13.6□□□□□ -0.23
CCDC38-201ENST00000344280 REG3GQ6UW15 175 aa13.59□□□□□ -0.23
CCDC38-201ENST00000344280 A0A1W2PNM2 257 aa13.59□□□□□ -0.23
CCDC38-201ENST00000344280 A0A1W2PNN7 141 aa13.59□□□□□ -0.23
CCDC38-201ENST00000344280 APLNQ9ULZ1 77 aa13.58□□□□□ -0.24
CCDC38-201ENST00000344280 TRAV7A0A075B6U4 112 aa13.57□□□□□ -0.24
CCDC38-201ENST00000344280 PSCAO43653 123 aa13.57□□□□□ -0.24
CCDC38-201ENST00000344280 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
CCDC38-201ENST00000344280 UBE2DNLQ8IWF7 75 aa13.57□□□□□ -0.24
CCDC38-201ENST00000344280 PLECQ15149 4684 aaKnown RBP13.57□□□□□ -0.24
CCDC38-201ENST00000344280 C1orf137Q5JT78 98 aa13.56□□□□□ -0.24
CCDC38-201ENST00000344280 BCE1O60756 84 aa13.56□□□□□ -0.24
CCDC38-201ENST00000344280 C16orf90A8MZG2 172 aa13.55□□□□□ -0.24
CCDC38-201ENST00000344280 BPY2O14599 106 aa13.55□□□□□ -0.24
CCDC38-201ENST00000344280 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
CCDC38-201ENST00000344280 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
CCDC38-201ENST00000344280 CNBPP62633 177 aaKnown RBP13.55□□□□□ -0.24
CCDC38-201ENST00000344280 MDFIQ99750 246 aa13.53□□□□□ -0.24
CCDC38-201ENST00000344280 PRLHP81277 87 aa13.52□□□□□ -0.24
CCDC38-201ENST00000344280 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC38-201ENST00000344280 SMIM29Q86T20 159 aa13.51□□□□□ -0.25
CCDC38-201ENST00000344280 CHTF8P0CG12 524 aa13.51□□□□□ -0.25
CCDC38-201ENST00000344280 A0A0G2JQZ4 141 aa13.5□□□□□ -0.25
CCDC38-201ENST00000344280 Q8NBF4 154 aa13.49□□□□□ -0.25
CCDC38-201ENST00000344280 SRRM2Q9UQ35 2752 aaKnown RBP13.49□□□□□ -0.25
CCDC38-201ENST00000344280 KRTAP11-1Q8IUC1 163 aa13.48□□□□□ -0.25
CCDC38-201ENST00000344280 SNURFQ9Y675 71 aa13.48□□□□□ -0.25
CCDC38-201ENST00000344280 OXTP01178 125 aa13.47□□□□□ -0.25
CCDC38-201ENST00000344280 Q5XG85 94 aa13.46□□□□□ -0.25
CCDC38-201ENST00000344280 SPRR4Q96PI1 79 aa13.44□□□□□ -0.26
CCDC38-201ENST00000344280 PHF5AQ7RTV0 110 aaKnown RBP13.44□□□□□ -0.26
CCDC38-201ENST00000344280 LINC00476Q8WZB0 136 aa13.44□□□□□ -0.26
CCDC38-201ENST00000344280 B9D2Q9BPU9 175 aa13.44□□□□□ -0.26
CCDC38-201ENST00000344280 H7BZZ5 65 aa13.43□□□□□ -0.26
CCDC38-201ENST00000344280 KLKP1Q107X0 134 aa13.43□□□□□ -0.26
CCDC38-201ENST00000344280 HIGD2AQ9BW72 106 aa13.43□□□□□ -0.26
CCDC38-201ENST00000344280 A0A1B0GW54 56 aa13.41□□□□□ -0.26
CCDC38-201ENST00000344280 STARD9Q9P2P6 4700 aa13.41□□□□□ -0.26
CCDC38-201ENST00000344280 C4orf26Q17RF5 130 aa13.4□□□□□ -0.26
CCDC38-201ENST00000344280 LRCOL1A6NCL2 159 aa13.39□□□□□ -0.27
CCDC38-201ENST00000344280 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
CCDC38-201ENST00000344280 C14orf177Q52M58 125 aa13.38□□□□□ -0.27
CCDC38-201ENST00000344280 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms