RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
LRRK2-202ENST00000343742 FBN1P35555 2871 aaKnown RBP8.3□□□□□ -1.08
LRRK2-202ENST00000343742 FAM240AA0A1B0GVK7 77 aa8.29□□□□□ -1.08
LRRK2-202ENST00000343742 C1orf137Q5JT78 98 aa8.29□□□□□ -1.08
LRRK2-202ENST00000343742 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
LRRK2-202ENST00000343742 VWFP04275 2813 aa8.29□□□□□ -1.08
LRRK2-202ENST00000343742 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
LRRK2-202ENST00000343742 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
LRRK2-202ENST00000343742 IGLV5-52A0A0A0MRZ9 124 aa8.28□□□□□ -1.08
LRRK2-202ENST00000343742 SPINK6Q6UWN8 80 aa8.28□□□□□ -1.08
LRRK2-202ENST00000343742 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
LRRK2-202ENST00000343742 TM2D3Q9BRN9 247 aa8.27□□□□□ -1.09
LRRK2-202ENST00000343742 NDUFB1O75438 58 aa8.27□□□□□ -1.09
LRRK2-202ENST00000343742 C1orf134Q5TEV5 83 aa8.27□□□□□ -1.09
LRRK2-202ENST00000343742 Q8N9L7 120 aa8.27□□□□□ -1.09
LRRK2-202ENST00000343742 VPREB1P12018 145 aa8.26□□□□□ -1.09
LRRK2-202ENST00000343742 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
LRRK2-202ENST00000343742 WFDC13Q8IUB5 93 aa8.26□□□□□ -1.09
LRRK2-202ENST00000343742 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
LRRK2-202ENST00000343742 ST20-AS1Q8NBB2 130 aa8.25□□□□□ -1.09
LRRK2-202ENST00000343742 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
LRRK2-202ENST00000343742 PDZD2O15018 2839 aa8.24□□□□□ -1.09
LRRK2-202ENST00000343742 LINC00474Q9P2X8 69 aa8.24□□□□□ -1.09
LRRK2-202ENST00000343742 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
LRRK2-202ENST00000343742 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
LRRK2-202ENST00000343742 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
LRRK2-202ENST00000343742 Q6JHZ5 121 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 Q6ZVQ6 151 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 Q9BRP9 147 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 A0A087WSZ3 146 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 PRYO14603 147 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 IGLV6-57P01721 117 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
LRRK2-202ENST00000343742 ELOF1P60002 83 aaKnown RBP8.21□□□□□ -1.09
LRRK2-202ENST00000343742 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.09
LRRK2-202ENST00000343742 UQCRQO14949 82 aa8.21□□□□□ -1.1
LRRK2-202ENST00000343742 VPS13CQ709C8 3753 aa8.21□□□□□ -1.1
LRRK2-202ENST00000343742 F8WDY8 70 aa8.2□□□□□ -1.1
LRRK2-202ENST00000343742 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
LRRK2-202ENST00000343742 WIPF1O43516 503 aa8.2□□□□□ -1.1
LRRK2-202ENST00000343742 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
LRRK2-202ENST00000343742 Q6ZRX8 168 aa8.17□□□□□ -1.1
LRRK2-202ENST00000343742 SERP2Q8N6R1 65 aa8.17□□□□□ -1.1
LRRK2-202ENST00000343742 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
LRRK2-202ENST00000343742 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
LRRK2-202ENST00000343742 A0A1W2PNN7 141 aa8.16□□□□□ -1.1
LRRK2-202ENST00000343742 CIRBP-AS1Q8TBR5 109 aa8.16□□□□□ -1.1
LRRK2-202ENST00000343742 MP68P56378 58 aa8.16□□□□□ -1.1
LRRK2-202ENST00000343742 PRR4Q16378 134 aa8.15□□□□□ -1.1
LRRK2-202ENST00000343742 Q6Q795 121 aa8.15□□□□□ -1.1
LRRK2-202ENST00000343742 Q8NDZ9 215 aa8.15□□□□□ -1.1
LRRK2-202ENST00000343742 TENM3Q9P273 2699 aa8.15□□□□□ -1.1
LRRK2-202ENST00000343742 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
LRRK2-202ENST00000343742 COX7CP15954 63 aa8.14□□□□□ -1.11
LRRK2-202ENST00000343742 Q6ZQT0 140 aa8.13□□□□□ -1.11
LRRK2-202ENST00000343742 RTL8CO15255 209 aa8.13□□□□□ -1.11
LRRK2-202ENST00000343742 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
LRRK2-202ENST00000343742 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
LRRK2-202ENST00000343742 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
LRRK2-202ENST00000343742 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
LRRK2-202ENST00000343742 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
LRRK2-202ENST00000343742 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
LRRK2-202ENST00000343742 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
LRRK2-202ENST00000343742 KCNQ1DNQ9H478 68 aa8.09□□□□□ -1.11
LRRK2-202ENST00000343742 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
LRRK2-202ENST00000343742 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
LRRK2-202ENST00000343742 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
LRRK2-202ENST00000343742 MOBPQ13875 183 aa8.05□□□□□ -1.12
LRRK2-202ENST00000343742 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
LRRK2-202ENST00000343742 Q8N377 158 aa8.05□□□□□ -1.12
LRRK2-202ENST00000343742 WWC2-AS2Q96NR7 200 aa8.04□□□□□ -1.12
LRRK2-202ENST00000343742 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
LRRK2-202ENST00000343742 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 J3KT08 172 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 A0A087WTM6 91 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
LRRK2-202ENST00000343742 LOC110117498A0A087WWA1 95 aa8.02□□□□□ -1.13
LRRK2-202ENST00000343742 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
LRRK2-202ENST00000343742 Q8NBF4 154 aa8.01□□□□□ -1.13
LRRK2-202ENST00000343742 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
LRRK2-202ENST00000343742 PKD1L1Q8TDX9 2849 aa8.01□□□□□ -1.13
LRRK2-202ENST00000343742 LINC00208Q96KT6 92 aa8□□□□□ -1.13
LRRK2-202ENST00000343742 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
LRRK2-202ENST00000343742 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
LRRK2-202ENST00000343742 SMIM29Q86T20 159 aa8□□□□□ -1.13
LRRK2-202ENST00000343742 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
LRRK2-202ENST00000343742 CXCL6P80162 114 aa7.98□□□□□ -1.13
LRRK2-202ENST00000343742 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
LRRK2-202ENST00000343742 TRRAPQ9Y4A5 3859 aa7.98□□□□□ -1.13
LRRK2-202ENST00000343742 BCE1O60756 84 aa7.98□□□□□ -1.13
LRRK2-202ENST00000343742 KRTAP26-1Q6PEX3 210 aa7.96□□□□□ -1.13
LRRK2-202ENST00000343742 TMEM258P61165 79 aa7.96□□□□□ -1.14
LRRK2-202ENST00000343742 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
LRRK2-202ENST00000343742 HCG22E2RYF7 251 aa7.94□□□□□ -1.14
LRRK2-202ENST00000343742 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
LRRK2-202ENST00000343742 TMEM254Q8TBM7 123 aa7.94□□□□□ -1.14
LRRK2-202ENST00000343742 TRBV7-4A0A0J9YYF1 115 aa7.94□□□□□ -1.14
LRRK2-202ENST00000343742 CNBPP62633 177 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms