RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
CDHR4-201ENST00000343366 KRTAP11-1Q8IUC1 163 aa11.5□□□□□ -0.57
CDHR4-201ENST00000343366 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
CDHR4-201ENST00000343366 C2orf91Q6ZV80 131 aa11.49□□□□□ -0.57
CDHR4-201ENST00000343366 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
CDHR4-201ENST00000343366 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
CDHR4-201ENST00000343366 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
CDHR4-201ENST00000343366 A6NJY4 79 aa11.46□□□□□ -0.57
CDHR4-201ENST00000343366 MT1HL1P0DM35 61 aa11.46□□□□□ -0.57
CDHR4-201ENST00000343366 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
CDHR4-201ENST00000343366 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
CDHR4-201ENST00000343366 A4D1N5 150 aa11.45□□□□□ -0.58
CDHR4-201ENST00000343366 ZNF861PO60384 105 aa11.45□□□□□ -0.58
CDHR4-201ENST00000343366 SPRR1AP35321 89 aa11.45□□□□□ -0.58
CDHR4-201ENST00000343366 HINT1P49773 126 aaPredicted RBP11.45□□□□□ -0.58
CDHR4-201ENST00000343366 H0Y9J4 135 aa11.44□□□□□ -0.58
CDHR4-201ENST00000343366 UBE2AP49459 152 aa11.44□□□□□ -0.58
CDHR4-201ENST00000343366 CEND1Q8N111 149 aa11.44□□□□□ -0.58
CDHR4-201ENST00000343366 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
CDHR4-201ENST00000343366 C12orf57Q99622 126 aa11.44□□□□□ -0.58
CDHR4-201ENST00000343366 A6NDN8 102 aa11.43□□□□□ -0.58
CDHR4-201ENST00000343366 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
CDHR4-201ENST00000343366 HSD52Q0P140 79 aa11.43□□□□□ -0.58
CDHR4-201ENST00000343366 ETDCA0A1B0GVM5 59 aa11.42□□□□□ -0.58
CDHR4-201ENST00000343366 TSTD3H0UI37 97 aa11.42□□□□□ -0.58
CDHR4-201ENST00000343366 FAM19A1Q7Z5A9 133 aa11.42□□□□□ -0.58
CDHR4-201ENST00000343366 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
CDHR4-201ENST00000343366 KRTAP4-16G5E9R7 235 aaPredicted RBP11.39□□□□□ -0.59
CDHR4-201ENST00000343366 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
CDHR4-201ENST00000343366 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
CDHR4-201ENST00000343366 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
CDHR4-201ENST00000343366 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
CDHR4-201ENST00000343366 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
CDHR4-201ENST00000343366 Q6ZRX8 168 aa11.35□□□□□ -0.59
CDHR4-201ENST00000343366 B5MCH6 92 aa11.34□□□□□ -0.59
CDHR4-201ENST00000343366 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
CDHR4-201ENST00000343366 CFC1P0CG37 223 aa11.34□□□□□ -0.59
CDHR4-201ENST00000343366 PRLHP81277 87 aa11.34□□□□□ -0.59
CDHR4-201ENST00000343366 VAMP3Q15836 100 aa11.33□□□□□ -0.6
CDHR4-201ENST00000343366 A0A1B0GWB2 263 aa11.32□□□□□ -0.6
CDHR4-201ENST00000343366 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
CDHR4-201ENST00000343366 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
CDHR4-201ENST00000343366 M0R143 59 aa11.31□□□□□ -0.6
CDHR4-201ENST00000343366 FXYD2P54710 66 aa11.31□□□□□ -0.6
CDHR4-201ENST00000343366 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
CDHR4-201ENST00000343366 COX7BP24311 80 aa11.3□□□□□ -0.6
CDHR4-201ENST00000343366 ELOF1P60002 83 aaKnown RBP11.3□□□□□ -0.6
CDHR4-201ENST00000343366 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
CDHR4-201ENST00000343366 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
CDHR4-201ENST00000343366 DHRS4-AS1Q9P1J3 65 aa11.3□□□□□ -0.6
CDHR4-201ENST00000343366 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
CDHR4-201ENST00000343366 BVES-AS1Q5T3Y7 98 aa11.29□□□□□ -0.6
CDHR4-201ENST00000343366 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
CDHR4-201ENST00000343366 CTAG1AP78358 180 aa11.26□□□□□ -0.61
CDHR4-201ENST00000343366 SMCR5Q8TEV8 140 aa11.25□□□□□ -0.61
CDHR4-201ENST00000343366 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CDHR4-201ENST00000343366 Q1RN00 199 aa11.24□□□□□ -0.61
CDHR4-201ENST00000343366 Q9BRP9 147 aa11.24□□□□□ -0.61
CDHR4-201ENST00000343366 SLC25A20O43772 301 aa11.23□□□□□ -0.61
CDHR4-201ENST00000343366 SNCGO76070 127 aa11.23□□□□□ -0.61
CDHR4-201ENST00000343366 H0YGX0 51 aa11.21□□□□□ -0.61
CDHR4-201ENST00000343366 H7C2G1 150 aa11.21□□□□□ -0.61
CDHR4-201ENST00000343366 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.61
CDHR4-201ENST00000343366 KRTAP1-4P0C5Y4 121 aa11.2□□□□□ -0.62
CDHR4-201ENST00000343366 SPRR4Q96PI1 79 aa11.19□□□□□ -0.62
CDHR4-201ENST00000343366 COX6CP09669 75 aa11.18□□□□□ -0.62
CDHR4-201ENST00000343366 CRYGAP11844 174 aa11.17□□□□□ -0.62
CDHR4-201ENST00000343366 LINC00575Q6W349 94 aa11.16□□□□□ -0.62
CDHR4-201ENST00000343366 ERC2-IT1O76042 136 aa11.15□□□□□ -0.62
CDHR4-201ENST00000343366 LINC00483Q53H64 154 aa11.15□□□□□ -0.62
CDHR4-201ENST00000343366 A0A1B0GX51 115 aa11.14□□□□□ -0.63
CDHR4-201ENST00000343366 hADV29S1A0JD25 119 aa11.14□□□□□ -0.63
CDHR4-201ENST00000343366 K7ERJ3 54 aa11.13□□□□□ -0.63
CDHR4-201ENST00000343366 PSMB2P49721 201 aa11.13□□□□□ -0.63
CDHR4-201ENST00000343366 GAGE2AQ6NT46 116 aa11.12□□□□□ -0.63
CDHR4-201ENST00000343366 LPAP08519 4548 aa11.11□□□□□ -0.63
CDHR4-201ENST00000343366 TSPAN13O95857 204 aa11.11□□□□□ -0.63
CDHR4-201ENST00000343366 GHRHP01286 108 aa11.11□□□□□ -0.63
CDHR4-201ENST00000343366 TRIAP1O43715 76 aa11.1□□□□□ -0.63
CDHR4-201ENST00000343366 SPRR1BP22528 89 aa11.1□□□□□ -0.63
CDHR4-201ENST00000343366 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
CDHR4-201ENST00000343366 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
CDHR4-201ENST00000343366 OCIAD2Q56VL3 154 aa11.09□□□□□ -0.63
CDHR4-201ENST00000343366 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
CDHR4-201ENST00000343366 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
CDHR4-201ENST00000343366 PPDPFLQ8WWR9 84 aa11.08□□□□□ -0.64
CDHR4-201ENST00000343366 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
CDHR4-201ENST00000343366 BATFQ16520 125 aa11.07□□□□□ -0.64
CDHR4-201ENST00000343366 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
CDHR4-201ENST00000343366 A0A087X002 238 aa11.06□□□□□ -0.64
CDHR4-201ENST00000343366 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
CDHR4-201ENST00000343366 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
CDHR4-201ENST00000343366 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
CDHR4-201ENST00000343366 SCGB1C2P0DMR2 95 aa11.05□□□□□ -0.64
CDHR4-201ENST00000343366 H3BQ85 93 aa11.04□□□□□ -0.64
CDHR4-201ENST00000343366 LYRM7Q5U5X0 104 aa11.04□□□□□ -0.64
CDHR4-201ENST00000343366 Q6ZQY7 126 aa11.04□□□□□ -0.64
CDHR4-201ENST00000343366 DNAL4O96015 105 aa11.02□□□□□ -0.65
CDHR4-201ENST00000343366 SSBP3-AS1Q7Z2R9 100 aa11.02□□□□□ -0.65
CDHR4-201ENST00000343366 DEFB105AQ8NG35 78 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms