RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
UBE3B-202ENST00000342494 C9orf92A6NGG3 77 aa9.88□□□□□ -0.83
UBE3B-202ENST00000342494 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
UBE3B-202ENST00000342494 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
UBE3B-202ENST00000342494 GIG44P09565 113 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-202ENST00000342494 PCSK5Q92824 1860 aa9.87□□□□□ -0.83
UBE3B-202ENST00000342494 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
UBE3B-202ENST00000342494 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
UBE3B-202ENST00000342494 GOLGB1Q14789 3259 aaKnown RBP9.86□□□□□ -0.83
UBE3B-202ENST00000342494 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
UBE3B-202ENST00000342494 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
UBE3B-202ENST00000342494 APLNQ9ULZ1 77 aa9.83□□□□□ -0.84
UBE3B-202ENST00000342494 C8orf17Q9NRJ1 99 aa9.82□□□□□ -0.84
UBE3B-202ENST00000342494 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
UBE3B-202ENST00000342494 ANAPC11Q9NYG5 84 aa9.81□□□□□ -0.84
UBE3B-202ENST00000342494 TLX1NBP0CAT3 122 aa9.8□□□□□ -0.84
UBE3B-202ENST00000342494 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
UBE3B-202ENST00000342494 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
UBE3B-202ENST00000342494 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
UBE3B-202ENST00000342494 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
UBE3B-202ENST00000342494 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
UBE3B-202ENST00000342494 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
UBE3B-202ENST00000342494 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
UBE3B-202ENST00000342494 Q8N377 158 aa9.77□□□□□ -0.85
UBE3B-202ENST00000342494 IGLV5-37A0A075B6J1 123 aa9.76□□□□□ -0.85
UBE3B-202ENST00000342494 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
UBE3B-202ENST00000342494 ATRQ13535 2644 aa9.76□□□□□ -0.85
UBE3B-202ENST00000342494 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
UBE3B-202ENST00000342494 RBM12B-AS1Q9P1G2 102 aa9.75□□□□□ -0.85
UBE3B-202ENST00000342494 MAST4O15021 2626 aa9.75□□□□□ -0.85
UBE3B-202ENST00000342494 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
UBE3B-202ENST00000342494 KRTAP1-1Q07627 177 aa9.75□□□□□ -0.85
UBE3B-202ENST00000342494 COA5Q86WW8 74 aa9.74□□□□□ -0.85
UBE3B-202ENST00000342494 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-202ENST00000342494 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
UBE3B-202ENST00000342494 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
UBE3B-202ENST00000342494 SPRR4Q96PI1 79 aa9.71□□□□□ -0.85
UBE3B-202ENST00000342494 ERC2-IT1O76042 136 aa9.69□□□□□ -0.86
UBE3B-202ENST00000342494 UQCR11O14957 56 aa9.68□□□□□ -0.86
UBE3B-202ENST00000342494 SPINT4Q6UDR6 99 aa9.68□□□□□ -0.86
UBE3B-202ENST00000342494 RPS28P62857 69 aaKnown RBP9.67□□□□□ -0.86
UBE3B-202ENST00000342494 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
UBE3B-202ENST00000342494 TNP2Q05952 138 aa9.65□□□□□ -0.86
UBE3B-202ENST00000342494 LINC01554Q52M75 96 aa9.61□□□□□ -0.87
UBE3B-202ENST00000342494 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
UBE3B-202ENST00000342494 A8MUN3 132 aa9.61□□□□□ -0.87
UBE3B-202ENST00000342494 HELZ2Q9BYK8 2649 aaKnown RBP9.6□□□□□ -0.87
UBE3B-202ENST00000342494 PRRC2CQ9Y520 2896 aaKnown RBP9.58□□□□□ -0.88
UBE3B-202ENST00000342494 CYP4F30PQ9H0H9 118 aa9.58□□□□□ -0.88
UBE3B-202ENST00000342494 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
UBE3B-202ENST00000342494 Q6ZSA8 131 aa9.57□□□□□ -0.88
UBE3B-202ENST00000342494 MIR22HGQ0VDD5 57 aa9.57□□□□□ -0.88
UBE3B-202ENST00000342494 BPTFQ12830 3046 aa9.56□□□□□ -0.88
UBE3B-202ENST00000342494 A0A1W2PNM2 257 aa9.56□□□□□ -0.88
UBE3B-202ENST00000342494 IGLV5-48A0A075B6I7 105 aa9.55□□□□□ -0.88
UBE3B-202ENST00000342494 Q8N1X5 172 aa9.55□□□□□ -0.88
UBE3B-202ENST00000342494 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
UBE3B-202ENST00000342494 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
UBE3B-202ENST00000342494 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
UBE3B-202ENST00000342494 KLKP1Q107X0 134 aa9.5□□□□□ -0.89
UBE3B-202ENST00000342494 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
UBE3B-202ENST00000342494 A0A0D9SG42 100 aa9.49□□□□□ -0.89
UBE3B-202ENST00000342494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-202ENST00000342494 M0R2T5 61 aa9.48□□□□□ -0.89
UBE3B-202ENST00000342494 CD164Q04900 197 aa9.47□□□□□ -0.89
UBE3B-202ENST00000342494 STAB1Q9NY15 2570 aa9.44□□□□□ -0.9
UBE3B-202ENST00000342494 WIPF1O43516 503 aa9.42□□□□□ -0.9
UBE3B-202ENST00000342494 UTRNP46939 3433 aa9.42□□□□□ -0.9
UBE3B-202ENST00000342494 CFAP46Q8IYW2 2715 aa9.41□□□□□ -0.9
UBE3B-202ENST00000342494 FAM229BQ4G0N7 80 aa9.39□□□□□ -0.91
UBE3B-202ENST00000342494 CDC42SE1Q9NRR8 79 aa9.39□□□□□ -0.91
UBE3B-202ENST00000342494 H7BZZ5 65 aa9.37□□□□□ -0.91
UBE3B-202ENST00000342494 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
UBE3B-202ENST00000342494 PLAC8Q9NZF1 115 aa9.35□□□□□ -0.91
UBE3B-202ENST00000342494 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
UBE3B-202ENST00000342494 CR1P17927 2039 aa9.32□□□□□ -0.92
UBE3B-202ENST00000342494 SETXQ7Z333 2677 aaKnown RBP9.31□□□□□ -0.92
UBE3B-202ENST00000342494 CENPEQ02224 2701 aa9.27□□□□□ -0.93
UBE3B-202ENST00000342494 DNAH12Q6ZR08 3092 aa9.25□□□□□ -0.93
UBE3B-202ENST00000342494 ZCCHC13Q8WW36 166 aaKnown RBP9.24□□□□□ -0.93
UBE3B-202ENST00000342494 HRES1P13985 223 aa9.24□□□□□ -0.93
UBE3B-202ENST00000342494 Q5VSD8 79 aa9.24□□□□□ -0.93
UBE3B-202ENST00000342494 CSAG1Q6PB30 78 aa9.23□□□□□ -0.93
UBE3B-202ENST00000342494 CEP350Q5VT06 3117 aa9.23□□□□□ -0.93
UBE3B-202ENST00000342494 TEP1Q99973 2627 aaKnown RBP9.22□□□□□ -0.93
UBE3B-202ENST00000342494 LCE6AA0A183 80 aa9.22□□□□□ -0.93
UBE3B-202ENST00000342494 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
UBE3B-202ENST00000342494 A0A1B0GU33 70 aa9.2□□□□□ -0.94
UBE3B-202ENST00000342494 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
UBE3B-202ENST00000342494 S4R3F8 94 aa9.17□□□□□ -0.94
UBE3B-202ENST00000342494 SPRR1AP35321 89 aa9.17□□□□□ -0.94
UBE3B-202ENST00000342494 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
UBE3B-202ENST00000342494 KRTAP1-5Q9BYS1 174 aa9.16□□□□□ -0.94
UBE3B-202ENST00000342494 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
UBE3B-202ENST00000342494 LUZP6Q538Z0 58 aa9.15□□□□□ -0.94
UBE3B-202ENST00000342494 AKAP13Q12802 2813 aa9.15□□□□□ -0.95
UBE3B-202ENST00000342494 Q1T7F1 81 aa9.14□□□□□ -0.95
UBE3B-202ENST00000342494 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-202ENST00000342494 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
UBE3B-202ENST00000342494 KTN1-AS1Q86SY8 53 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms