RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 K7EIL1 84 aa9.89□□□□□ -0.83
RET-201ENST00000340058 Q6ZRP5 223 aa9.88□□□□□ -0.83
RET-201ENST00000340058 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
RET-201ENST00000340058 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
RET-201ENST00000340058 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
RET-201ENST00000340058 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
RET-201ENST00000340058 Q9BRP9 147 aa9.87□□□□□ -0.83
RET-201ENST00000340058 TMEM258P61165 79 aa9.86□□□□□ -0.83
RET-201ENST00000340058 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
RET-201ENST00000340058 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
RET-201ENST00000340058 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
RET-201ENST00000340058 FAM236DA0A1B0GTK5 79 aa9.84□□□□□ -0.83
RET-201ENST00000340058 FAM236CP0DP71 79 aa9.84□□□□□ -0.83
RET-201ENST00000340058 PHF5AQ7RTV0 110 aaKnown RBP9.83□□□□□ -0.84
RET-201ENST00000340058 LINC00474Q9P2X8 69 aa9.83□□□□□ -0.84
RET-201ENST00000340058 C1orf134Q5TEV5 83 aa9.83□□□□□ -0.84
RET-201ENST00000340058 TENM4Q6N022 2769 aa9.82□□□□□ -0.84
RET-201ENST00000340058 Q6Q795 121 aa9.82□□□□□ -0.84
RET-201ENST00000340058 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
RET-201ENST00000340058 H3BNG1 76 aa9.82□□□□□ -0.84
RET-201ENST00000340058 MXRA5Q9NR99 2828 aa9.81□□□□□ -0.84
RET-201ENST00000340058 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
RET-201ENST00000340058 CASC10Q5T4H9 136 aa9.8□□□□□ -0.84
RET-201ENST00000340058 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
RET-201ENST00000340058 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
RET-201ENST00000340058 PRYO14603 147 aa9.8□□□□□ -0.84
RET-201ENST00000340058 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
RET-201ENST00000340058 VPREB1P12018 145 aa9.79□□□□□ -0.84
RET-201ENST00000340058 CHKB-CPT1BH3BT56 60 aa9.78□□□□□ -0.84
RET-201ENST00000340058 CELSR1Q9NYQ6 3014 aa9.77□□□□□ -0.85
RET-201ENST00000340058 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
RET-201ENST00000340058 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
RET-201ENST00000340058 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
RET-201ENST00000340058 IGHV6-1A0A0B4J1U7 121 aa9.75□□□□□ -0.85
RET-201ENST00000340058 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
RET-201ENST00000340058 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
RET-201ENST00000340058 ELOF1P60002 83 aaKnown RBP9.75□□□□□ -0.85
RET-201ENST00000340058 C15orf56Q8N910 161 aa9.75□□□□□ -0.85
RET-201ENST00000340058 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
RET-201ENST00000340058 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
RET-201ENST00000340058 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
RET-201ENST00000340058 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
RET-201ENST00000340058 CUBNO60494 3623 aa9.73□□□□□ -0.85
RET-201ENST00000340058 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
RET-201ENST00000340058 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
RET-201ENST00000340058 TRBV7-7A0A0K0K1E9 115 aa9.72□□□□□ -0.85
RET-201ENST00000340058 IGLV6-57P01721 117 aa9.71□□□□□ -0.85
RET-201ENST00000340058 Q6ZRX8 168 aa9.71□□□□□ -0.85
RET-201ENST00000340058 BRK1Q8WUW1 75 aa9.71□□□□□ -0.86
RET-201ENST00000340058 F8WDY8 70 aa9.7□□□□□ -0.86
RET-201ENST00000340058 Q6ZQT0 140 aa9.7□□□□□ -0.86
RET-201ENST00000340058 SMG1Q96Q15 3661 aaKnown RBP9.68□□□□□ -0.86
RET-201ENST00000340058 EPM2AB3EWF7 344 aa9.68□□□□□ -0.86
RET-201ENST00000340058 MOBPQ13875 183 aa9.67□□□□□ -0.86
RET-201ENST00000340058 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
RET-201ENST00000340058 CASC2Q6XLA1 102 aa9.67□□□□□ -0.86
RET-201ENST00000340058 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
RET-201ENST00000340058 SMIM29Q86T20 159 aa9.65□□□□□ -0.86
RET-201ENST00000340058 CSMD1Q96PZ7 3565 aa9.65□□□□□ -0.86
RET-201ENST00000340058 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
RET-201ENST00000340058 TMEM254Q8TBM7 123 aa9.64□□□□□ -0.87
RET-201ENST00000340058 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
RET-201ENST00000340058 RTL8CO15255 209 aa9.63□□□□□ -0.87
RET-201ENST00000340058 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
RET-201ENST00000340058 TM2D3Q9BRN9 247 aa9.62□□□□□ -0.87
RET-201ENST00000340058 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
RET-201ENST00000340058 Q8NBF4 154 aa9.61□□□□□ -0.87
RET-201ENST00000340058 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
RET-201ENST00000340058 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
RET-201ENST00000340058 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
RET-201ENST00000340058 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
RET-201ENST00000340058 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
RET-201ENST00000340058 NDUFC1O43677 76 aa9.58□□□□□ -0.88
RET-201ENST00000340058 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
RET-201ENST00000340058 CXCL6P80162 114 aa9.58□□□□□ -0.88
RET-201ENST00000340058 TRBV7-6A0A0J9YX20 115 aa9.57□□□□□ -0.88
RET-201ENST00000340058 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
RET-201ENST00000340058 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
RET-201ENST00000340058 Q8N377 158 aa9.56□□□□□ -0.88
RET-201ENST00000340058 Q8NDZ9 215 aa9.56□□□□□ -0.88
RET-201ENST00000340058 H0Y9P7 68 aa9.55□□□□□ -0.88
RET-201ENST00000340058 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
RET-201ENST00000340058 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
RET-201ENST00000340058 K7EQZ3 153 aa9.5□□□□□ -0.89
RET-201ENST00000340058 BCE1O60756 84 aa9.49□□□□□ -0.89
RET-201ENST00000340058 PSPHP1O15172 72 aa9.48□□□□□ -0.89
RET-201ENST00000340058 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
RET-201ENST00000340058 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
RET-201ENST00000340058 C9orf163Q8N9P6 203 aa9.47□□□□□ -0.89
RET-201ENST00000340058 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
RET-201ENST00000340058 C1orf64Q8NEQ6 169 aa9.47□□□□□ -0.89
RET-201ENST00000340058 A0A087WTM6 91 aa9.46□□□□□ -0.89
RET-201ENST00000340058 SPINK1P00995 79 aa9.46□□□□□ -0.89
RET-201ENST00000340058 IGFL1Q6UW32 110 aa9.46□□□□□ -0.89
RET-201ENST00000340058 WWC2-AS2Q96NR7 200 aa9.46□□□□□ -0.89
RET-201ENST00000340058 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.9
RET-201ENST00000340058 CRYGAP11844 174 aa9.45□□□□□ -0.9
RET-201ENST00000340058 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
RET-201ENST00000340058 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
RET-201ENST00000340058 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms