RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SETD2Q9BYW2 2564 aaPredicted RBP6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 SLURP1P55000 103 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 FBXL19-AS1Q494R0 122 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 MAP6D1Q9H9H5 199 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 F8P00451 2351 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 B4DSR2 109 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 DSCR10P59022 87 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC10AQ9H1F0 79 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 FLNBO75369 2602 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 H3BUA1 57 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 COA5Q86WW8 74 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 A0A1W2PPR1 153 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 Q8NAQ8 132 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 NOTCH2Q04721 2471 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 CCDC168Q8NDH2 2452 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 COX17Q14061 63 aa6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 NDUFB1O75438 58 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 MP68P56378 58 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 DSCR9P59020 149 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 IGHV4-30-2A0A087WSY4 118 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 SPAG11BQ08648 103 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 C11orf71Q6IPW1 123 aa6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 J3QKU1 62 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 H0Y9P7 68 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 ANGP03950 147 aaKnown RBP6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 PCOTHQ58A44 107 aa6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 Q9BRP9 147 aa6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 DEFB114Q30KQ6 69 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 Q8N377 158 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 BAHCC1Q9P281 2608 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 GYPEP15421 78 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 CASC2Q6XLA1 102 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 H3BQ85 93 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 DEFB112Q30KQ8 113 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 KCNQ1DNQ9H478 68 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 PDZD2O15018 2839 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 C7orf33Q8WU49 177 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 KRTAP10-9P60411 292 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 REG3AQ06141 175 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 ITPR3Q14573 2671 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 IGHV4-61A0A0C4DH41 118 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 FLNAP21333 2647 aaKnown RBP6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 ACANP16112 2415 aa6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 VPREB1P12018 145 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 Q8NBF4 154 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV5-48A0A075B6I7 105 aa6.18□□□□□ -1.42
PTCHD4-201ENST00000339488 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
PTCHD4-201ENST00000339488 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
PTCHD4-201ENST00000339488 CCL19Q99731 98 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 MTORP42345 2549 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 RPL37AP8A6NKH3 93 aa6.15□□□□□ -1.42
PTCHD4-201ENST00000339488 Q6ZR54 194 aa6.15□□□□□ -1.42
PTCHD4-201ENST00000339488 CSNK1G2-AS1Q8NCQ2 148 aa6.14□□□□□ -1.43
PTCHD4-201ENST00000339488 MAST4O15021 2626 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 DEFB4AO15263 64 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 A0A087WSZ3 146 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 TNP2Q05952 138 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms