RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SETD2Q9BYW2 2564 aaPredicted RBP6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 SLURP1P55000 103 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 FBXL19-AS1Q494R0 122 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
PTCHD4-201ENST00000339488 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 MAP6D1Q9H9H5 199 aa6.36□□□□□ -1.39
PTCHD4-201ENST00000339488 F8P00451 2351 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 B4DSR2 109 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 DSCR10P59022 87 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
PTCHD4-201ENST00000339488 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC10AQ9H1F0 79 aa6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 FLNBO75369 2602 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-201ENST00000339488 H3BUA1 57 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 COA5Q86WW8 74 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
PTCHD4-201ENST00000339488 A0A1W2PPR1 153 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 Q8NAQ8 132 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 NOTCH2Q04721 2471 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 CCDC168Q8NDH2 2452 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
PTCHD4-201ENST00000339488 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 COX17Q14061 63 aa6.31□□□□□ -1.4
PTCHD4-201ENST00000339488 NDUFB1O75438 58 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 MP68P56378 58 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 DSCR9P59020 149 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 IGHV4-30-2A0A087WSY4 118 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 SPAG11BQ08648 103 aa6.3□□□□□ -1.4
PTCHD4-201ENST00000339488 C11orf71Q6IPW1 123 aa6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
PTCHD4-201ENST00000339488 J3QKU1 62 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 H0Y9P7 68 aa6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 ANGP03950 147 aaKnown RBP6.28□□□□□ -1.4
PTCHD4-201ENST00000339488 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 PCOTHQ58A44 107 aa6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 Q9BRP9 147 aa6.27□□□□□ -1.41
PTCHD4-201ENST00000339488 DEFB114Q30KQ6 69 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 Q8N377 158 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 BAHCC1Q9P281 2608 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 GYPEP15421 78 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 CASC2Q6XLA1 102 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
PTCHD4-201ENST00000339488 H3BQ85 93 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 DEFB112Q30KQ8 113 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 KCNQ1DNQ9H478 68 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
PTCHD4-201ENST00000339488 PDZD2O15018 2839 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 C7orf33Q8WU49 177 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 KRTAP10-9P60411 292 aa6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
PTCHD4-201ENST00000339488 REG3AQ06141 175 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
PTCHD4-201ENST00000339488 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 ITPR3Q14573 2671 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 IGHV4-61A0A0C4DH41 118 aa6.22□□□□□ -1.41
PTCHD4-201ENST00000339488 FLNAP21333 2647 aaKnown RBP6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 ACANP16112 2415 aa6.21□□□□□ -1.42
PTCHD4-201ENST00000339488 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 VPREB1P12018 145 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 Q8NBF4 154 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
PTCHD4-201ENST00000339488 IGLV5-48A0A075B6I7 105 aa6.18□□□□□ -1.42
PTCHD4-201ENST00000339488 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
PTCHD4-201ENST00000339488 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
PTCHD4-201ENST00000339488 CCL19Q99731 98 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 MTORP42345 2549 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
PTCHD4-201ENST00000339488 RPL37AP8A6NKH3 93 aa6.15□□□□□ -1.42
PTCHD4-201ENST00000339488 Q6ZR54 194 aa6.15□□□□□ -1.42
PTCHD4-201ENST00000339488 CSNK1G2-AS1Q8NCQ2 148 aa6.14□□□□□ -1.43
PTCHD4-201ENST00000339488 MAST4O15021 2626 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 DEFB4AO15263 64 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 A0A087WSZ3 146 aa6.13□□□□□ -1.43
PTCHD4-201ENST00000339488 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 TNP2Q05952 138 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms