RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
ITGA4-202ENST00000339307 S100A12P80511 92 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 PCP2Q8IVA1 136 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 DAND5Q8N907 189 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 SMCR5Q8TEV8 140 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 LITAFQ99732 161 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 MIEN1Q9BRT3 115 aa11.15□□□□□ -0.62
ITGA4-202ENST00000339307 Q6ZVH6 145 aa11.14□□□□□ -0.63
ITGA4-202ENST00000339307 VAMP8Q9BV40 100 aa11.14□□□□□ -0.63
ITGA4-202ENST00000339307 PYY3Q5JQD4 70 aa11.13□□□□□ -0.63
ITGA4-202ENST00000339307 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
ITGA4-202ENST00000339307 Q8NBF4 154 aa11.13□□□□□ -0.63
ITGA4-202ENST00000339307 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
ITGA4-202ENST00000339307 KCNQ1DNQ9H478 68 aa11.13□□□□□ -0.63
ITGA4-202ENST00000339307 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
ITGA4-202ENST00000339307 LINC00337Q8N6G1 96 aa11.12□□□□□ -0.63
ITGA4-202ENST00000339307 DLEU1O43261 78 aa11.11□□□□□ -0.63
ITGA4-202ENST00000339307 NDUFC2O95298 119 aa11.11□□□□□ -0.63
ITGA4-202ENST00000339307 COX8AP10176 69 aa11.11□□□□□ -0.63
ITGA4-202ENST00000339307 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
ITGA4-202ENST00000339307 SPANXCQ9NY87 97 aa11.11□□□□□ -0.63
ITGA4-202ENST00000339307 IFITM1P13164 125 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 SPRR1AP35321 89 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
ITGA4-202ENST00000339307 TRBV10-2A0A0K0K1G8 114 aa11.08□□□□□ -0.64
ITGA4-202ENST00000339307 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
ITGA4-202ENST00000339307 IGLV9-49A0A0B4J1Y8 123 aa11.06□□□□□ -0.64
ITGA4-202ENST00000339307 DDTP30046 118 aa11.06□□□□□ -0.64
ITGA4-202ENST00000339307 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
ITGA4-202ENST00000339307 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
ITGA4-202ENST00000339307 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
ITGA4-202ENST00000339307 B5MCH6 92 aa11.04□□□□□ -0.64
ITGA4-202ENST00000339307 SPINK1P00995 79 aa11.03□□□□□ -0.64
ITGA4-202ENST00000339307 MOBPQ13875 183 aa11.03□□□□□ -0.64
ITGA4-202ENST00000339307 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
ITGA4-202ENST00000339307 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
ITGA4-202ENST00000339307 LINC00518Q8N0U6 118 aa11.02□□□□□ -0.64
ITGA4-202ENST00000339307 C14orf144Q96I85 54 aa11.02□□□□□ -0.64
ITGA4-202ENST00000339307 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.65
ITGA4-202ENST00000339307 EIF4EBP3O60516 100 aaPredicted RBP11.01□□□□□ -0.65
ITGA4-202ENST00000339307 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
ITGA4-202ENST00000339307 NPC2P61916 151 aa11.01□□□□□ -0.65
ITGA4-202ENST00000339307 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
ITGA4-202ENST00000339307 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
ITGA4-202ENST00000339307 CBY1Q9Y3M2 126 aa11.01□□□□□ -0.65
ITGA4-202ENST00000339307 LCE2AQ5TA79 106 aaPredicted RBP11□□□□□ -0.65
ITGA4-202ENST00000339307 MUSTN1Q8IVN3 82 aa10.99□□□□□ -0.65
ITGA4-202ENST00000339307 KRTAP9-2Q9BYQ4 174 aa10.99□□□□□ -0.65
ITGA4-202ENST00000339307 SMIM6P0DI80 62 aa10.98□□□□□ -0.65
ITGA4-202ENST00000339307 Q9BRP9 147 aa10.98□□□□□ -0.65
ITGA4-202ENST00000339307 KRTAP13-3Q3SY46 172 aa10.97□□□□□ -0.65
ITGA4-202ENST00000339307 Q6ZRX8 168 aa10.97□□□□□ -0.65
ITGA4-202ENST00000339307 MUC17Q685J3 4493 aa10.97□□□□□ -0.65
ITGA4-202ENST00000339307 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
ITGA4-202ENST00000339307 C9orf153Q5TBE3 101 aa10.96□□□□□ -0.65
ITGA4-202ENST00000339307 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.65
ITGA4-202ENST00000339307 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
ITGA4-202ENST00000339307 HIST1H4GQ99525 98 aa10.95□□□□□ -0.66
ITGA4-202ENST00000339307 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
ITGA4-202ENST00000339307 TAL2Q16559 108 aa10.93□□□□□ -0.66
ITGA4-202ENST00000339307 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
ITGA4-202ENST00000339307 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
ITGA4-202ENST00000339307 TRAV13-2A0A0B4J235 113 aa10.91□□□□□ -0.66
ITGA4-202ENST00000339307 ZNF73O43830 326 aaPredicted RBP10.91□□□□□ -0.66
ITGA4-202ENST00000339307 HINT1P49773 126 aaPredicted RBP10.91□□□□□ -0.66
ITGA4-202ENST00000339307 Q8N377 158 aa10.91□□□□□ -0.66
ITGA4-202ENST00000339307 SLC25A20O43772 301 aa10.9□□□□□ -0.66
ITGA4-202ENST00000339307 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
ITGA4-202ENST00000339307 ASB16-AS1Q495Z4 193 aa10.89□□□□□ -0.67
ITGA4-202ENST00000339307 ST20-AS1Q8NBB2 130 aa10.89□□□□□ -0.67
ITGA4-202ENST00000339307 A4D1N5 150 aa10.88□□□□□ -0.67
ITGA4-202ENST00000339307 SEC61BP60468 96 aaKnown RBP10.88□□□□□ -0.67
ITGA4-202ENST00000339307 RPS29P62273 56 aaKnown RBP10.88□□□□□ -0.67
ITGA4-202ENST00000339307 A6NDN8 102 aa10.85□□□□□ -0.67
ITGA4-202ENST00000339307 CEND1Q8N111 149 aa10.84□□□□□ -0.67
ITGA4-202ENST00000339307 TMEM238LA0A1B0GVL6 79 aa10.84□□□□□ -0.67
ITGA4-202ENST00000339307 A6NJY4 79 aa10.84□□□□□ -0.67
ITGA4-202ENST00000339307 HSD52Q0P140 79 aa10.84□□□□□ -0.67
ITGA4-202ENST00000339307 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
ITGA4-202ENST00000339307 HRCT1Q6UXD1 115 aa10.82□□□□□ -0.68
ITGA4-202ENST00000339307 TRBV7-6A0A0J9YX20 115 aa10.81□□□□□ -0.68
ITGA4-202ENST00000339307 C12orf57Q99622 126 aa10.81□□□□□ -0.68
ITGA4-202ENST00000339307 KRTAP4-1Q9BYQ7 146 aa10.8□□□□□ -0.68
ITGA4-202ENST00000339307 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
ITGA4-202ENST00000339307 TSTD3H0UI37 97 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 CFC1BP0CG36 223 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 CFC1P0CG37 223 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 C6orf99Q4VX62 202 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 PRO1933Q9H354 126 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 DHRS4-AS1Q9P1J3 65 aa10.77□□□□□ -0.68
ITGA4-202ENST00000339307 RAB37Q96AX2 223 aa10.76□□□□□ -0.69
ITGA4-202ENST00000339307 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
ITGA4-202ENST00000339307 XP32Q5T750 250 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 LAMTOR3Q9UHA4 124 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 FXYD2P54710 66 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms