RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 Q6ZQT0 140 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
CDK5RAP1-201ENST00000339269 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP1-201ENST00000339269 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
CDK5RAP1-201ENST00000339269 C4orf26Q17RF5 130 aa8.41□□□□□ -1.06
CDK5RAP1-201ENST00000339269 Q5XG85 94 aa8.41□□□□□ -1.06
CDK5RAP1-201ENST00000339269 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
CDK5RAP1-201ENST00000339269 PLECQ15149 4684 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP1-201ENST00000339269 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
CDK5RAP1-201ENST00000339269 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
CDK5RAP1-201ENST00000339269 C3orf22Q8N5N4 141 aa8.4□□□□□ -1.06
CDK5RAP1-201ENST00000339269 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
CDK5RAP1-201ENST00000339269 DNAH7Q8WXX0 4024 aa8.4□□□□□ -1.06
CDK5RAP1-201ENST00000339269 C9orf153Q5TBE3 101 aa8.4□□□□□ -1.07
CDK5RAP1-201ENST00000339269 LINC00336Q6ZUF6 198 aa8.4□□□□□ -1.07
CDK5RAP1-201ENST00000339269 C7orf33Q8WU49 177 aa8.4□□□□□ -1.07
CDK5RAP1-201ENST00000339269 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.07
CDK5RAP1-201ENST00000339269 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
CDK5RAP1-201ENST00000339269 UQCRQO14949 82 aa8.38□□□□□ -1.07
CDK5RAP1-201ENST00000339269 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
CDK5RAP1-201ENST00000339269 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
CDK5RAP1-201ENST00000339269 RBM3P98179 157 aaKnown RBP8.38□□□□□ -1.07
CDK5RAP1-201ENST00000339269 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
CDK5RAP1-201ENST00000339269 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
CDK5RAP1-201ENST00000339269 LAMTOR3Q9UHA4 124 aa8.36□□□□□ -1.07
CDK5RAP1-201ENST00000339269 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
CDK5RAP1-201ENST00000339269 KRTAP4-16G5E9R7 235 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP1-201ENST00000339269 A0A087WVE0 104 aa8.35□□□□□ -1.07
CDK5RAP1-201ENST00000339269 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
CDK5RAP1-201ENST00000339269 H3BQ85 93 aa8.34□□□□□ -1.07
CDK5RAP1-201ENST00000339269 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
CDK5RAP1-201ENST00000339269 RMI2Q96E14 147 aa8.33□□□□□ -1.08
CDK5RAP1-201ENST00000339269 DPH3Q96FX2 82 aa8.33□□□□□ -1.08
CDK5RAP1-201ENST00000339269 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
CDK5RAP1-201ENST00000339269 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
CDK5RAP1-201ENST00000339269 CRYGAP11844 174 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 SPRR1AP35321 89 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 TMEM258P61165 79 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 APLNQ9ULZ1 77 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP1-201ENST00000339269 Q9BRP9 147 aa8.31□□□□□ -1.08
CDK5RAP1-201ENST00000339269 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
CDK5RAP1-201ENST00000339269 RPL37AP8A6NKH3 93 aa8.3□□□□□ -1.08
CDK5RAP1-201ENST00000339269 ATP5EP2Q5VTU8 51 aa8.3□□□□□ -1.08
CDK5RAP1-201ENST00000339269 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
CDK5RAP1-201ENST00000339269 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
CDK5RAP1-201ENST00000339269 Q8N377 158 aa8.29□□□□□ -1.08
CDK5RAP1-201ENST00000339269 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 PRYO14603 147 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 PDE6GP18545 87 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 Q6ZRX8 168 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 Q6ZVQ6 151 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 UBL5Q9BZL1 73 aa8.28□□□□□ -1.08
CDK5RAP1-201ENST00000339269 FAM236DA0A1B0GTK5 79 aa8.27□□□□□ -1.09
CDK5RAP1-201ENST00000339269 FAM236CP0DP71 79 aa8.27□□□□□ -1.09
CDK5RAP1-201ENST00000339269 ATOX1O00244 68 aa8.26□□□□□ -1.09
CDK5RAP1-201ENST00000339269 OXTP01178 125 aa8.26□□□□□ -1.09
CDK5RAP1-201ENST00000339269 COX7CP15954 63 aa8.26□□□□□ -1.09
CDK5RAP1-201ENST00000339269 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP1-201ENST00000339269 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP1-201ENST00000339269 A0A096LNI7 61 aa8.25□□□□□ -1.09
CDK5RAP1-201ENST00000339269 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
CDK5RAP1-201ENST00000339269 GHRHP01286 108 aa8.24□□□□□ -1.09
CDK5RAP1-201ENST00000339269 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CDK5RAP1-201ENST00000339269 TNP2Q05952 138 aa8.23□□□□□ -1.09
CDK5RAP1-201ENST00000339269 DHRS4-AS1Q9P1J3 65 aa8.23□□□□□ -1.09
CDK5RAP1-201ENST00000339269 IGLV5-48A0A075B6I7 105 aa8.22□□□□□ -1.09
CDK5RAP1-201ENST00000339269 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
CDK5RAP1-201ENST00000339269 NUPR2A6NF83 97 aa8.21□□□□□ -1.09
CDK5RAP1-201ENST00000339269 DEFB105AQ8NG35 78 aa8.21□□□□□ -1.09
CDK5RAP1-201ENST00000339269 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.09
CDK5RAP1-201ENST00000339269 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP1-201ENST00000339269 ETDCA0A1B0GVM5 59 aa8.21□□□□□ -1.1
CDK5RAP1-201ENST00000339269 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
CDK5RAP1-201ENST00000339269 CD164Q04900 197 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 UBE2DNLQ8IWF7 75 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 CXCL6P80162 114 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 HAMPP81172 84 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 SERP2Q8N6R1 65 aa8.19□□□□□ -1.1
CDK5RAP1-201ENST00000339269 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
CDK5RAP1-201ENST00000339269 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP1-201ENST00000339269 DNAH2Q9P225 4427 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 IGKV2-24A0A0C4DH68 120 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 DNAH17Q9UFH2 4485 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
CDK5RAP1-201ENST00000339269 PSCAO43653 123 aa8.16□□□□□ -1.1
CDK5RAP1-201ENST00000339269 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms