RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 A0A0G2JQZ4 141 aa9.47□□□□□ -0.89
PCDH8-201ENST00000338862 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
PCDH8-201ENST00000338862 TMEM254Q8TBM7 123 aa9.47□□□□□ -0.89
PCDH8-201ENST00000338862 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
PCDH8-201ENST00000338862 C16orf95Q9H693 158 aa9.46□□□□□ -0.89
PCDH8-201ENST00000338862 H7BZZ5 65 aa9.46□□□□□ -0.9
PCDH8-201ENST00000338862 IGLV6-57P01721 117 aa9.46□□□□□ -0.9
PCDH8-201ENST00000338862 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
PCDH8-201ENST00000338862 TRBV7-6A0A0J9YX20 115 aa9.44□□□□□ -0.9
PCDH8-201ENST00000338862 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
PCDH8-201ENST00000338862 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
PCDH8-201ENST00000338862 Q8NAQ8 132 aa9.43□□□□□ -0.9
PCDH8-201ENST00000338862 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
PCDH8-201ENST00000338862 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 Q6ZRP5 223 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 A0A0J9YWU9 116 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 LINC00167Q96N53 147 aa9.42□□□□□ -0.9
PCDH8-201ENST00000338862 LOC110117498A0A087WWA1 95 aa9.41□□□□□ -0.9
PCDH8-201ENST00000338862 TENM4Q6N022 2769 aa9.41□□□□□ -0.9
PCDH8-201ENST00000338862 FAM168BA1KXE4 195 aa9.41□□□□□ -0.9
PCDH8-201ENST00000338862 ESRGQ1W209 222 aa9.41□□□□□ -0.9
PCDH8-201ENST00000338862 EGFEM1PQ0D2K5 195 aa9.4□□□□□ -0.9
PCDH8-201ENST00000338862 ELOF1P60002 83 aaKnown RBP9.4□□□□□ -0.9
PCDH8-201ENST00000338862 SMIM29Q86T20 159 aa9.4□□□□□ -0.9
PCDH8-201ENST00000338862 VPREB1P12018 145 aa9.4□□□□□ -0.91
PCDH8-201ENST00000338862 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.91
PCDH8-201ENST00000338862 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
PCDH8-201ENST00000338862 PSCAO43653 123 aa9.39□□□□□ -0.91
PCDH8-201ENST00000338862 CXCL6P80162 114 aa9.39□□□□□ -0.91
PCDH8-201ENST00000338862 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
PCDH8-201ENST00000338862 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
PCDH8-201ENST00000338862 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
PCDH8-201ENST00000338862 LINC00612Q8N6U2 182 aa9.38□□□□□ -0.91
PCDH8-201ENST00000338862 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
PCDH8-201ENST00000338862 Q5XG85 94 aa9.38□□□□□ -0.91
PCDH8-201ENST00000338862 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
PCDH8-201ENST00000338862 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
PCDH8-201ENST00000338862 PRYO14603 147 aa9.37□□□□□ -0.91
PCDH8-201ENST00000338862 SEC61GP60059 68 aa9.37□□□□□ -0.91
PCDH8-201ENST00000338862 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
PCDH8-201ENST00000338862 V9GYY9 64 aa9.36□□□□□ -0.91
PCDH8-201ENST00000338862 PSPHP1O15172 72 aa9.34□□□□□ -0.91
PCDH8-201ENST00000338862 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
PCDH8-201ENST00000338862 TRRAPQ9Y4A5 3859 aa9.33□□□□□ -0.92
PCDH8-201ENST00000338862 H3BQ85 93 aa9.33□□□□□ -0.92
PCDH8-201ENST00000338862 PRR34Q9NV39 138 aa9.33□□□□□ -0.92
PCDH8-201ENST00000338862 PRLHP81277 87 aa9.32□□□□□ -0.92
PCDH8-201ENST00000338862 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
PCDH8-201ENST00000338862 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
PCDH8-201ENST00000338862 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
PCDH8-201ENST00000338862 NDUFC1O43677 76 aa9.3□□□□□ -0.92
PCDH8-201ENST00000338862 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
PCDH8-201ENST00000338862 Q8N377 158 aa9.29□□□□□ -0.92
PCDH8-201ENST00000338862 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
PCDH8-201ENST00000338862 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
PCDH8-201ENST00000338862 FAM229BQ4G0N7 80 aa9.28□□□□□ -0.92
PCDH8-201ENST00000338862 A0A087WSZ3 146 aa9.27□□□□□ -0.93
PCDH8-201ENST00000338862 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
PCDH8-201ENST00000338862 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
PCDH8-201ENST00000338862 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
PCDH8-201ENST00000338862 H0Y9J4 135 aa9.26□□□□□ -0.93
PCDH8-201ENST00000338862 K7EQZ3 153 aa9.26□□□□□ -0.93
PCDH8-201ENST00000338862 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
PCDH8-201ENST00000338862 GVQW2A0A096LPI5 108 aaPredicted RBP9.25□□□□□ -0.93
PCDH8-201ENST00000338862 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
PCDH8-201ENST00000338862 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
PCDH8-201ENST00000338862 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
PCDH8-201ENST00000338862 UBE2AP49459 152 aa9.23□□□□□ -0.93
PCDH8-201ENST00000338862 MP68P56378 58 aa9.22□□□□□ -0.93
PCDH8-201ENST00000338862 A0A1W2PNM2 257 aa9.22□□□□□ -0.93
PCDH8-201ENST00000338862 NDUFS5O43920 106 aa9.22□□□□□ -0.93
PCDH8-201ENST00000338862 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
PCDH8-201ENST00000338862 Q6ZRX8 168 aa9.21□□□□□ -0.94
PCDH8-201ENST00000338862 KRTAP10-11P60412 298 aa9.19□□□□□ -0.94
PCDH8-201ENST00000338862 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
PCDH8-201ENST00000338862 Q9BRP9 147 aa9.18□□□□□ -0.94
PCDH8-201ENST00000338862 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
PCDH8-201ENST00000338862 LINC00476Q8WZB0 136 aa9.18□□□□□ -0.94
PCDH8-201ENST00000338862 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
PCDH8-201ENST00000338862 WIPF1O43516 503 aa9.17□□□□□ -0.94
PCDH8-201ENST00000338862 BCE1O60756 84 aa9.17□□□□□ -0.94
PCDH8-201ENST00000338862 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
PCDH8-201ENST00000338862 Q8NBF4 154 aa9.17□□□□□ -0.94
PCDH8-201ENST00000338862 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
PCDH8-201ENST00000338862 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
PCDH8-201ENST00000338862 OCR1Q9BZK8 76 aa9.16□□□□□ -0.94
PCDH8-201ENST00000338862 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
PCDH8-201ENST00000338862 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
PCDH8-201ENST00000338862 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
PCDH8-201ENST00000338862 HCG22E2RYF7 251 aa9.15□□□□□ -0.95
PCDH8-201ENST00000338862 F8WDY8 70 aa9.15□□□□□ -0.95
PCDH8-201ENST00000338862 LINC00588Q9Y4M8 146 aa9.14□□□□□ -0.95
PCDH8-201ENST00000338862 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
PCDH8-201ENST00000338862 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
PCDH8-201ENST00000338862 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
PCDH8-201ENST00000338862 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
PCDH8-201ENST00000338862 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
PCDH8-201ENST00000338862 IGLV1-50A0A075B6I6 118 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms