RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
CDK5RAP3-201ENST00000338399 C6orf99Q4VX62 202 aa9.34□□□□□ -0.91
CDK5RAP3-201ENST00000338399 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CDK5RAP3-201ENST00000338399 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
CDK5RAP3-201ENST00000338399 TRBV20-1A0A075B6N2 111 aa9.32□□□□□ -0.92
CDK5RAP3-201ENST00000338399 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
CDK5RAP3-201ENST00000338399 PKD1P98161 4303 aa9.32□□□□□ -0.92
CDK5RAP3-201ENST00000338399 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
CDK5RAP3-201ENST00000338399 ZNF73O43830 326 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 ATXN8Q156A1 80 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 H0YGX0 51 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 MTURNQ8N3F0 131 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
CDK5RAP3-201ENST00000338399 A0A087WYN8 130 aa9.29□□□□□ -0.92
CDK5RAP3-201ENST00000338399 LST1O00453 97 aa9.29□□□□□ -0.92
CDK5RAP3-201ENST00000338399 CDIP1Q9H305 208 aa9.28□□□□□ -0.92
CDK5RAP3-201ENST00000338399 PRYO14603 147 aa9.26□□□□□ -0.93
CDK5RAP3-201ENST00000338399 EPM2AB3EWF7 344 aa9.25□□□□□ -0.93
CDK5RAP3-201ENST00000338399 KRTAP10-1P60331 282 aa9.25□□□□□ -0.93
CDK5RAP3-201ENST00000338399 UBE2BP63146 152 aa9.25□□□□□ -0.93
CDK5RAP3-201ENST00000338399 COX7BP24311 80 aa9.25□□□□□ -0.93
CDK5RAP3-201ENST00000338399 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
CDK5RAP3-201ENST00000338399 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CDK5RAP3-201ENST00000338399 PPDPFLQ8WWR9 84 aa9.24□□□□□ -0.93
CDK5RAP3-201ENST00000338399 PLAC8Q9NZF1 115 aa9.24□□□□□ -0.93
CDK5RAP3-201ENST00000338399 TRBV7-6A0A0J9YX20 115 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 C9JAW5 83 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 REG3GQ6UW15 175 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 TRACP01848 142 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 SPRR1AP35321 89 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
CDK5RAP3-201ENST00000338399 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
CDK5RAP3-201ENST00000338399 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.93
CDK5RAP3-201ENST00000338399 ETDCA0A1B0GVM5 59 aa9.21□□□□□ -0.94
CDK5RAP3-201ENST00000338399 DNAL4O96015 105 aa9.2□□□□□ -0.94
CDK5RAP3-201ENST00000338399 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
CDK5RAP3-201ENST00000338399 A0A1B0GX51 115 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 hADV29S1A0JD25 119 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 B5MCH6 92 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 XGP55808 180 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 Q6ZSA8 131 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 SLC25A20O43772 301 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
CDK5RAP3-201ENST00000338399 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
CDK5RAP3-201ENST00000338399 SNCGO76070 127 aa9.18□□□□□ -0.94
CDK5RAP3-201ENST00000338399 Q6ZRX8 168 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 SVIPQ8NHG7 77 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 RYR3Q15413 4870 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 HAMPP81172 84 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 SCXQ7RTU7 201 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 FAM19A1Q7Z5A9 133 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 ANKRD29Q8N6D5 301 aa9.17□□□□□ -0.94
CDK5RAP3-201ENST00000338399 Q9BRP9 147 aa9.15□□□□□ -0.94
CDK5RAP3-201ENST00000338399 BAALC-AS2P0C853 105 aa9.15□□□□□ -0.95
CDK5RAP3-201ENST00000338399 LINC01600Q96MT4 127 aa9.15□□□□□ -0.95
CDK5RAP3-201ENST00000338399 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
CDK5RAP3-201ENST00000338399 PRLHP81277 87 aa9.14□□□□□ -0.95
CDK5RAP3-201ENST00000338399 H3BT86 120 aa9.13□□□□□ -0.95
CDK5RAP3-201ENST00000338399 Q6ZQY7 126 aa9.13□□□□□ -0.95
CDK5RAP3-201ENST00000338399 ORMDL1Q9P0S3 153 aa9.13□□□□□ -0.95
CDK5RAP3-201ENST00000338399 DHRS4-AS1Q9P1J3 65 aa9.13□□□□□ -0.95
CDK5RAP3-201ENST00000338399 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
CDK5RAP3-201ENST00000338399 BCE1O60756 84 aa9.12□□□□□ -0.95
CDK5RAP3-201ENST00000338399 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
CDK5RAP3-201ENST00000338399 UBE2AP49459 152 aa9.11□□□□□ -0.95
CDK5RAP3-201ENST00000338399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-201ENST00000338399 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
CDK5RAP3-201ENST00000338399 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-201ENST00000338399 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
CDK5RAP3-201ENST00000338399 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
CDK5RAP3-201ENST00000338399 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
CDK5RAP3-201ENST00000338399 H0Y9J4 135 aa9.08□□□□□ -0.96
CDK5RAP3-201ENST00000338399 TMEM256-PLSCR3K7ERE1 68 aa9.07□□□□□ -0.96
CDK5RAP3-201ENST00000338399 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
CDK5RAP3-201ENST00000338399 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
CDK5RAP3-201ENST00000338399 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
CDK5RAP3-201ENST00000338399 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
CDK5RAP3-201ENST00000338399 Q6Q795 121 aa9.04□□□□□ -0.96
CDK5RAP3-201ENST00000338399 TEX49A0A1B0GTD5 131 aa9.03□□□□□ -0.96
CDK5RAP3-201ENST00000338399 GHRHP01286 108 aa9.03□□□□□ -0.96
CDK5RAP3-201ENST00000338399 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-201ENST00000338399 H3BQ85 93 aa9.02□□□□□ -0.96
CDK5RAP3-201ENST00000338399 Q8N377 158 aa9.02□□□□□ -0.96
CDK5RAP3-201ENST00000338399 ZNF861PO60384 105 aa9.01□□□□□ -0.97
CDK5RAP3-201ENST00000338399 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
CDK5RAP3-201ENST00000338399 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
CDK5RAP3-201ENST00000338399 NDUFV3P56181 108 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-201ENST00000338399 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
CDK5RAP3-201ENST00000338399 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-201ENST00000338399 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
CDK5RAP3-201ENST00000338399 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-201ENST00000338399 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms