RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 HIST1H2BNQ99877 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BMQ99879 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 PCOTHQ58A44 107 aa6.28□□□□□ -1.4
CSMD2-202ENST00000338325 C9orf153Q5TBE3 101 aa6.28□□□□□ -1.4
CSMD2-202ENST00000338325 Q6ZRX8 168 aa6.28□□□□□ -1.4
CSMD2-202ENST00000338325 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
CSMD2-202ENST00000338325 TRGC2P03986 189 aa6.27□□□□□ -1.41
CSMD2-202ENST00000338325 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
CSMD2-202ENST00000338325 DDTP30046 118 aa6.27□□□□□ -1.41
CSMD2-202ENST00000338325 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
CSMD2-202ENST00000338325 MAP1LC3CQ9BXW4 147 aa6.26□□□□□ -1.41
CSMD2-202ENST00000338325 TRAV12-1A0A0B4J245 112 aa6.25□□□□□ -1.41
CSMD2-202ENST00000338325 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
CSMD2-202ENST00000338325 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
CSMD2-202ENST00000338325 TRAPPC1Q9Y5R8 145 aa6.25□□□□□ -1.41
CSMD2-202ENST00000338325 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
CSMD2-202ENST00000338325 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
CSMD2-202ENST00000338325 TSTD3H0UI37 97 aa6.24□□□□□ -1.41
CSMD2-202ENST00000338325 JOSD1Q15040 202 aaPredicted RBP6.24□□□□□ -1.41
CSMD2-202ENST00000338325 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
CSMD2-202ENST00000338325 LIMD2Q9BT23 127 aa6.24□□□□□ -1.41
CSMD2-202ENST00000338325 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
CSMD2-202ENST00000338325 HIST1H2BLQ99880 126 aa6.23□□□□□ -1.41
CSMD2-202ENST00000338325 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
CSMD2-202ENST00000338325 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
CSMD2-202ENST00000338325 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
CSMD2-202ENST00000338325 FABP4P15090 132 aa6.21□□□□□ -1.42
CSMD2-202ENST00000338325 S100A7L2Q5SY68 101 aa6.21□□□□□ -1.42
CSMD2-202ENST00000338325 C14orf144Q96I85 54 aa6.21□□□□□ -1.42
CSMD2-202ENST00000338325 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
CSMD2-202ENST00000338325 ST20-AS1Q8NBB2 130 aa6.2□□□□□ -1.42
CSMD2-202ENST00000338325 M0R2T5 61 aa6.2□□□□□ -1.42
CSMD2-202ENST00000338325 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
CSMD2-202ENST00000338325 MIEN1Q9BRT3 115 aa6.2□□□□□ -1.42
CSMD2-202ENST00000338325 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
CSMD2-202ENST00000338325 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
CSMD2-202ENST00000338325 NDUFC2O95298 119 aa6.19□□□□□ -1.42
CSMD2-202ENST00000338325 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
CSMD2-202ENST00000338325 CHCHD1Q96BP2 118 aaKnown RBP6.19□□□□□ -1.42
CSMD2-202ENST00000338325 LEPROTO15243 131 aa6.18□□□□□ -1.42
CSMD2-202ENST00000338325 SPRR1BP22528 89 aa6.16□□□□□ -1.42
CSMD2-202ENST00000338325 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
CSMD2-202ENST00000338325 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
CSMD2-202ENST00000338325 H0Y8G0 127 aa6.15□□□□□ -1.43
CSMD2-202ENST00000338325 J3QQQ9 107 aa6.15□□□□□ -1.43
CSMD2-202ENST00000338325 HINT1P49773 126 aaPredicted RBP6.15□□□□□ -1.43
CSMD2-202ENST00000338325 CBY1Q9Y3M2 126 aa6.15□□□□□ -1.43
CSMD2-202ENST00000338325 NMUP48645 174 aa6.14□□□□□ -1.43
CSMD2-202ENST00000338325 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
CSMD2-202ENST00000338325 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
CSMD2-202ENST00000338325 NPC2P61916 151 aa6.13□□□□□ -1.43
CSMD2-202ENST00000338325 CD164Q04900 197 aa6.13□□□□□ -1.43
CSMD2-202ENST00000338325 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
CSMD2-202ENST00000338325 A0A1B0GV90 55 aa6.12□□□□□ -1.43
CSMD2-202ENST00000338325 HSBP1O75506 76 aa6.12□□□□□ -1.43
CSMD2-202ENST00000338325 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
CSMD2-202ENST00000338325 PLNP26678 52 aa6.12□□□□□ -1.43
CSMD2-202ENST00000338325 HERVK_113P61574 105 aa6.12□□□□□ -1.43
CSMD2-202ENST00000338325 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
CSMD2-202ENST00000338325 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
CSMD2-202ENST00000338325 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
CSMD2-202ENST00000338325 M0R143 59 aa6.1□□□□□ -1.43
CSMD2-202ENST00000338325 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
CSMD2-202ENST00000338325 Q5XG85 94 aa6.09□□□□□ -1.43
CSMD2-202ENST00000338325 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.44
CSMD2-202ENST00000338325 H7C2G1 150 aa6.09□□□□□ -1.44
CSMD2-202ENST00000338325 DPM2O94777 84 aa6.09□□□□□ -1.44
CSMD2-202ENST00000338325 SCGB1D1O95968 90 aa6.09□□□□□ -1.44
CSMD2-202ENST00000338325 Q1RN00 199 aa6.09□□□□□ -1.44
CSMD2-202ENST00000338325 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
CSMD2-202ENST00000338325 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
CSMD2-202ENST00000338325 LEPROTL1O95214 131 aa6.08□□□□□ -1.44
CSMD2-202ENST00000338325 C1orf195Q5TG92 126 aa6.08□□□□□ -1.44
CSMD2-202ENST00000338325 OR13C6PQ8NH95 151 aa6.08□□□□□ -1.44
CSMD2-202ENST00000338325 TAL2Q16559 108 aa6.07□□□□□ -1.44
CSMD2-202ENST00000338325 SNHG12Q9BXW3 62 aa6.07□□□□□ -1.44
CSMD2-202ENST00000338325 SPANXCQ9NY87 97 aa6.07□□□□□ -1.44
CSMD2-202ENST00000338325 IGKCP01834 107 aa6.06□□□□□ -1.44
CSMD2-202ENST00000338325 LINC00310P59036 64 aa6.06□□□□□ -1.44
CSMD2-202ENST00000338325 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
CSMD2-202ENST00000338325 PMCHL2Q9BQD1 86 aa6.06□□□□□ -1.44
CSMD2-202ENST00000338325 SERF1AO75920 110 aa6.05□□□□□ -1.44
CSMD2-202ENST00000338325 COX7BP24311 80 aa6.05□□□□□ -1.44
CSMD2-202ENST00000338325 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
CSMD2-202ENST00000338325 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 SMIM29Q86T20 159 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 LINC00308Q8TCZ7 52 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 SPANXDQ9BXN6 97 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 HSPB8Q9UJY1 196 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 VAMP8Q9BV40 100 aa6.04□□□□□ -1.44
CSMD2-202ENST00000338325 E9PLD3 99 aa6.03□□□□□ -1.44
CSMD2-202ENST00000338325 C6orf99Q4VX62 202 aa6.03□□□□□ -1.44
CSMD2-202ENST00000338325 LITAFQ99732 161 aa6.03□□□□□ -1.44
CSMD2-202ENST00000338325 C20orf202A1L168 122 aa6.02□□□□□ -1.45
CSMD2-202ENST00000338325 A0A0G2JQZ4 141 aa6.01□□□□□ -1.45
CSMD2-202ENST00000338325 DLEU1O43261 78 aa6.01□□□□□ -1.45
CSMD2-202ENST00000338325 TIMM17BO60830 172 aa6□□□□□ -1.45
CSMD2-202ENST00000338325 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
CSMD2-202ENST00000338325 Q6Q795 121 aa6□□□□□ -1.45
CSMD2-202ENST00000338325 UQCR10Q9UDW1 63 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms