RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 WIPF1O43516 503 aa8.62□□□□□ -1.03
HLCS-201ENST00000336648 J3QL48 77 aa8.62□□□□□ -1.03
HLCS-201ENST00000336648 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
HLCS-201ENST00000336648 Q8N377 158 aa8.6□□□□□ -1.03
HLCS-201ENST00000336648 LINC00612Q8N6U2 182 aa8.6□□□□□ -1.03
HLCS-201ENST00000336648 FN1P02751 2386 aaKnown RBP8.6□□□□□ -1.03
HLCS-201ENST00000336648 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
HLCS-201ENST00000336648 USP9XQ93008 2570 aaPredicted RBP8.6□□□□□ -1.03
HLCS-201ENST00000336648 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
HLCS-201ENST00000336648 COL27A1Q8IZC6 1860 aaPredicted RBP8.58□□□□□ -1.04
HLCS-201ENST00000336648 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
HLCS-201ENST00000336648 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
HLCS-201ENST00000336648 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
HLCS-201ENST00000336648 ZFYVE26Q68DK2 2539 aa8.57□□□□□ -1.04
HLCS-201ENST00000336648 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
HLCS-201ENST00000336648 A0A087WTM6 91 aa8.53□□□□□ -1.04
HLCS-201ENST00000336648 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
HLCS-201ENST00000336648 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
HLCS-201ENST00000336648 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
HLCS-201ENST00000336648 K7EIL1 84 aa8.5□□□□□ -1.05
HLCS-201ENST00000336648 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
HLCS-201ENST00000336648 TLN2Q9Y4G6 2542 aa8.49□□□□□ -1.05
HLCS-201ENST00000336648 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
HLCS-201ENST00000336648 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
HLCS-201ENST00000336648 Q75L30 129 aa8.48□□□□□ -1.05
HLCS-201ENST00000336648 PKD1L2Q7Z442 2459 aa8.47□□□□□ -1.05
HLCS-201ENST00000336648 Q8N1X5 172 aa8.47□□□□□ -1.05
HLCS-201ENST00000336648 KRTAP10-11P60412 298 aa8.46□□□□□ -1.05
HLCS-201ENST00000336648 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.05
HLCS-201ENST00000336648 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
HLCS-201ENST00000336648 F8P00451 2351 aa8.45□□□□□ -1.06
HLCS-201ENST00000336648 A0A1W2PNM2 257 aa8.45□□□□□ -1.06
HLCS-201ENST00000336648 USP9YO00507 2555 aaPredicted RBP8.44□□□□□ -1.06
HLCS-201ENST00000336648 ZNF462Q96JM2 2506 aa8.43□□□□□ -1.06
HLCS-201ENST00000336648 A0A1B0GU33 70 aa8.42□□□□□ -1.06
HLCS-201ENST00000336648 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
HLCS-201ENST00000336648 A0A096LNT2 108 aa8.42□□□□□ -1.06
HLCS-201ENST00000336648 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
HLCS-201ENST00000336648 A0A1W2PNN7 141 aa8.4□□□□□ -1.07
HLCS-201ENST00000336648 A0A0G2JQZ4 141 aa8.39□□□□□ -1.07
HLCS-201ENST00000336648 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
HLCS-201ENST00000336648 SETD2Q9BYW2 2564 aaPredicted RBP8.37□□□□□ -1.07
HLCS-201ENST00000336648 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
HLCS-201ENST00000336648 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
HLCS-201ENST00000336648 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
HLCS-201ENST00000336648 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
HLCS-201ENST00000336648 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
HLCS-201ENST00000336648 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
HLCS-201ENST00000336648 KRTAP10-3P60369 221 aa8.32□□□□□ -1.08
HLCS-201ENST00000336648 ANAPC11Q9NYG5 84 aa8.32□□□□□ -1.08
HLCS-201ENST00000336648 PCSK5Q92824 1860 aa8.3□□□□□ -1.08
HLCS-201ENST00000336648 SPINK7P58062 85 aa8.3□□□□□ -1.08
HLCS-201ENST00000336648 Q5XG85 94 aa8.29□□□□□ -1.08
HLCS-201ENST00000336648 CEP295Q9C0D2 2601 aa8.29□□□□□ -1.08
HLCS-201ENST00000336648 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
HLCS-201ENST00000336648 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
HLCS-201ENST00000336648 MTORP42345 2549 aa8.28□□□□□ -1.08
HLCS-201ENST00000336648 CASC10Q5T4H9 136 aa8.26□□□□□ -1.09
HLCS-201ENST00000336648 HRES1P13985 223 aa8.26□□□□□ -1.09
HLCS-201ENST00000336648 CHD8Q9HCK8 2581 aa8.26□□□□□ -1.09
HLCS-201ENST00000336648 Q6ZSA8 131 aa8.25□□□□□ -1.09
HLCS-201ENST00000336648 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
HLCS-201ENST00000336648 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
HLCS-201ENST00000336648 Q5VV11 94 aa8.2□□□□□ -1.1
HLCS-201ENST00000336648 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
HLCS-201ENST00000336648 ROMO1P60602 79 aa8.16□□□□□ -1.1
HLCS-201ENST00000336648 S4R3F8 94 aa8.16□□□□□ -1.1
HLCS-201ENST00000336648 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
HLCS-201ENST00000336648 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
HLCS-201ENST00000336648 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.11
HLCS-201ENST00000336648 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
HLCS-201ENST00000336648 KRTAP1-1Q07627 177 aa8.12□□□□□ -1.11
HLCS-201ENST00000336648 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
HLCS-201ENST00000336648 SPRR1AP35321 89 aa8.12□□□□□ -1.11
HLCS-201ENST00000336648 SPRR1BP22528 89 aa8.11□□□□□ -1.11
HLCS-201ENST00000336648 SPTBN4Q9H254 2564 aa8.11□□□□□ -1.11
HLCS-201ENST00000336648 TNP2Q05952 138 aa8.11□□□□□ -1.11
HLCS-201ENST00000336648 EP400Q96L91 3159 aa8.1□□□□□ -1.11
HLCS-201ENST00000336648 ACANP16112 2415 aa8.1□□□□□ -1.11
HLCS-201ENST00000336648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
HLCS-201ENST00000336648 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
HLCS-201ENST00000336648 POLQO75417 2590 aa8.08□□□□□ -1.12
HLCS-201ENST00000336648 WDR87Q6ZQQ6 2873 aa8.07□□□□□ -1.12
HLCS-201ENST00000336648 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
HLCS-201ENST00000336648 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
HLCS-201ENST00000336648 M0R2T5 61 aa8.05□□□□□ -1.12
HLCS-201ENST00000336648 R4GN34 69 aa8.04□□□□□ -1.12
HLCS-201ENST00000336648 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
HLCS-201ENST00000336648 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.12
HLCS-201ENST00000336648 Q5W150 140 aa8.02□□□□□ -1.13
HLCS-201ENST00000336648 CYSTM1Q9H1C7 97 aa8□□□□□ -1.13
HLCS-201ENST00000336648 CR1P17927 2039 aa7.99□□□□□ -1.13
HLCS-201ENST00000336648 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.13
HLCS-201ENST00000336648 Q8NDZ9 215 aa7.89□□□□□ -1.15
HLCS-201ENST00000336648 M0QZ58 72 aa7.88□□□□□ -1.15
HLCS-201ENST00000336648 OXTP01178 125 aa7.87□□□□□ -1.15
HLCS-201ENST00000336648 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
HLCS-201ENST00000336648 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
HLCS-201ENST00000336648 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
HLCS-201ENST00000336648 Q6ZR54 194 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms