RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
TMEM39B-201ENST00000336294 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
TMEM39B-201ENST00000336294 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
TMEM39B-201ENST00000336294 APLNQ9ULZ1 77 aa10.84□□□□□ -0.67
TMEM39B-201ENST00000336294 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
TMEM39B-201ENST00000336294 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
TMEM39B-201ENST00000336294 CRYGAP11844 174 aa10.82□□□□□ -0.68
TMEM39B-201ENST00000336294 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
TMEM39B-201ENST00000336294 DNAH1Q9P2D7 4330 aa10.82□□□□□ -0.68
TMEM39B-201ENST00000336294 IGLV5-37A0A075B6J1 123 aa10.81□□□□□ -0.68
TMEM39B-201ENST00000336294 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
TMEM39B-201ENST00000336294 DSCR8Q96T75 97 aa10.8□□□□□ -0.68
TMEM39B-201ENST00000336294 SERP2Q8N6R1 65 aa10.79□□□□□ -0.68
TMEM39B-201ENST00000336294 KRTAP1-5Q9BYS1 174 aa10.79□□□□□ -0.68
TMEM39B-201ENST00000336294 FAM168BA1KXE4 195 aa10.77□□□□□ -0.69
TMEM39B-201ENST00000336294 PSCAO43653 123 aa10.77□□□□□ -0.69
TMEM39B-201ENST00000336294 DNAH9Q9NYC9 4486 aa10.76□□□□□ -0.69
TMEM39B-201ENST00000336294 PRYO14603 147 aa10.76□□□□□ -0.69
TMEM39B-201ENST00000336294 A0A087WVE0 104 aa10.75□□□□□ -0.69
TMEM39B-201ENST00000336294 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 BCE1O60756 84 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 COL7A1Q02388 2944 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 TRBV7-4A0A0J9YYF1 115 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 SVIPQ8NHG7 77 aa10.74□□□□□ -0.69
TMEM39B-201ENST00000336294 RPL37AP8A6NKH3 93 aa10.73□□□□□ -0.69
TMEM39B-201ENST00000336294 CNBPP62633 177 aaKnown RBP10.72□□□□□ -0.69
TMEM39B-201ENST00000336294 FAM19A5Q7Z5A7 132 aaPredicted RBP10.72□□□□□ -0.69
TMEM39B-201ENST00000336294 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
TMEM39B-201ENST00000336294 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
TMEM39B-201ENST00000336294 CXCL6P80162 114 aa10.71□□□□□ -0.69
TMEM39B-201ENST00000336294 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
TMEM39B-201ENST00000336294 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
TMEM39B-201ENST00000336294 SPRR1AP35321 89 aa10.7□□□□□ -0.7
TMEM39B-201ENST00000336294 Q6ZVQ6 151 aa10.7□□□□□ -0.7
TMEM39B-201ENST00000336294 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
TMEM39B-201ENST00000336294 Q6ZRX8 168 aa10.7□□□□□ -0.7
TMEM39B-201ENST00000336294 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
TMEM39B-201ENST00000336294 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 DYNC2H1Q8NCM8 4307 aaKnown RBP10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 MEGF8Q7Z7M0 2845 aa10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 C16orf90A8MZG2 172 aa10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 SMIM20Q8N5G0 67 aa10.68□□□□□ -0.7
TMEM39B-201ENST00000336294 STAB2Q8WWQ8 2551 aa10.67□□□□□ -0.7
TMEM39B-201ENST00000336294 M0R2N4 97 aa10.66□□□□□ -0.7
TMEM39B-201ENST00000336294 TMEM258P61165 79 aa10.66□□□□□ -0.7
TMEM39B-201ENST00000336294 A0A096LNI7 61 aa10.65□□□□□ -0.7
TMEM39B-201ENST00000336294 NBDYA0A0U1RRE5 68 aa10.65□□□□□ -0.7
TMEM39B-201ENST00000336294 Q9BRP9 147 aa10.64□□□□□ -0.71
TMEM39B-201ENST00000336294 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
TMEM39B-201ENST00000336294 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.63□□□□□ -0.71
TMEM39B-201ENST00000336294 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
TMEM39B-201ENST00000336294 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
TMEM39B-201ENST00000336294 Q8N377 158 aa10.63□□□□□ -0.71
TMEM39B-201ENST00000336294 HAMPP81172 84 aa10.62□□□□□ -0.71
TMEM39B-201ENST00000336294 TRAV7A0A075B6U4 112 aa10.6□□□□□ -0.71
TMEM39B-201ENST00000336294 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-201ENST00000336294 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
TMEM39B-201ENST00000336294 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
TMEM39B-201ENST00000336294 J3KT08 172 aa10.59□□□□□ -0.71
TMEM39B-201ENST00000336294 A0A1W2PNN7 141 aa10.58□□□□□ -0.72
TMEM39B-201ENST00000336294 UBE2BP63146 152 aa10.58□□□□□ -0.72
TMEM39B-201ENST00000336294 IGLV5-48A0A075B6I7 105 aa10.58□□□□□ -0.72
TMEM39B-201ENST00000336294 A0A1B0GW54 56 aa10.58□□□□□ -0.72
TMEM39B-201ENST00000336294 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
TMEM39B-201ENST00000336294 Q6ZRN7 208 aaPredicted RBP10.56□□□□□ -0.72
TMEM39B-201ENST00000336294 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
TMEM39B-201ENST00000336294 ST20-AS1Q8NBB2 130 aa10.56□□□□□ -0.72
TMEM39B-201ENST00000336294 CYSTM1Q9H1C7 97 aa10.56□□□□□ -0.72
TMEM39B-201ENST00000336294 LYSTQ99698 3801 aa10.55□□□□□ -0.72
TMEM39B-201ENST00000336294 ERC2-IT1O76042 136 aa10.54□□□□□ -0.72
TMEM39B-201ENST00000336294 DNAH10Q8IVF4 4471 aa10.54□□□□□ -0.72
TMEM39B-201ENST00000336294 CHTF8P0CG12 524 aa10.52□□□□□ -0.73
TMEM39B-201ENST00000336294 TGP01266 2768 aa10.52□□□□□ -0.73
TMEM39B-201ENST00000336294 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
TMEM39B-201ENST00000336294 TNP2Q05952 138 aa10.51□□□□□ -0.73
TMEM39B-201ENST00000336294 CSMD3Q7Z407 3707 aa10.5□□□□□ -0.73
TMEM39B-201ENST00000336294 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
TMEM39B-201ENST00000336294 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
TMEM39B-201ENST00000336294 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 PRLHP81277 87 aa10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 KLKP1Q107X0 134 aa10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 NREPQ16612 68 aa10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 C20orf197Q8N268 126 aa10.48□□□□□ -0.73
TMEM39B-201ENST00000336294 DPH3Q96FX2 82 aa10.47□□□□□ -0.73
TMEM39B-201ENST00000336294 DNAH7Q8WXX0 4024 aa10.45□□□□□ -0.74
TMEM39B-201ENST00000336294 C3orf84H3BNL1 204 aa10.45□□□□□ -0.74
TMEM39B-201ENST00000336294 SCXQ7RTU7 201 aa10.45□□□□□ -0.74
TMEM39B-201ENST00000336294 HIGD2AQ9BW72 106 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 A0A1W2PNM2 257 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 F8WEM9 126 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 H0Y9J4 135 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 IGKV4-1P06312 121 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
TMEM39B-201ENST00000336294 A0A087WTM6 91 aa10.43□□□□□ -0.74
TMEM39B-201ENST00000336294 BPY2O14599 106 aa10.43□□□□□ -0.74
TMEM39B-201ENST00000336294 KRTAP11-1Q8IUC1 163 aa10.43□□□□□ -0.74
TMEM39B-201ENST00000336294 Q8NBF4 154 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms