RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 A0A0D9SG42 100 aa11.93□□□□□ -0.5
SYNM-202ENST00000336292 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
SYNM-202ENST00000336292 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
SYNM-202ENST00000336292 LAMA2P24043 3122 aaKnown RBP11.92□□□□□ -0.5
SYNM-202ENST00000336292 ZNF861PO60384 105 aa11.89□□□□□ -0.51
SYNM-202ENST00000336292 EPG5Q9HCE0 2579 aa11.88□□□□□ -0.51
SYNM-202ENST00000336292 TNP2Q05952 138 aa11.87□□□□□ -0.51
SYNM-202ENST00000336292 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
SYNM-202ENST00000336292 C19orf73Q9NVV2 129 aa11.87□□□□□ -0.51
SYNM-202ENST00000336292 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
SYNM-202ENST00000336292 LINC00336Q6ZUF6 198 aa11.86□□□□□ -0.51
SYNM-202ENST00000336292 PSORS1C2Q9UIG4 136 aa11.86□□□□□ -0.51
SYNM-202ENST00000336292 TRBV7-4A0A0J9YYF1 115 aa11.86□□□□□ -0.51
SYNM-202ENST00000336292 Q6ZQT0 140 aa11.86□□□□□ -0.51
SYNM-202ENST00000336292 IGLV1-50A0A075B6I6 118 aa11.85□□□□□ -0.51
SYNM-202ENST00000336292 VPREB1P12018 145 aa11.84□□□□□ -0.51
SYNM-202ENST00000336292 MRPL34Q9BQ48 92 aaKnown RBP11.84□□□□□ -0.51
SYNM-202ENST00000336292 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
SYNM-202ENST00000336292 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
SYNM-202ENST00000336292 MGAM2Q2M2H8 2515 aa11.82□□□□□ -0.52
SYNM-202ENST00000336292 IGLV7-43P04211 117 aa11.81□□□□□ -0.52
SYNM-202ENST00000336292 CR1P17927 2039 aa11.81□□□□□ -0.52
SYNM-202ENST00000336292 C9orf129Q5T035 196 aaKnown RBP11.81□□□□□ -0.52
SYNM-202ENST00000336292 Q8N1X5 172 aa11.8□□□□□ -0.52
SYNM-202ENST00000336292 CDH23Q9H251 3354 aa11.8□□□□□ -0.52
SYNM-202ENST00000336292 A8MWP4 228 aa11.8□□□□□ -0.52
SYNM-202ENST00000336292 IGFL1Q6UW32 110 aa11.8□□□□□ -0.52
SYNM-202ENST00000336292 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
SYNM-202ENST00000336292 Q6ZSA8 131 aa11.77□□□□□ -0.53
SYNM-202ENST00000336292 DNAH14Q0VDD8 3507 aa11.75□□□□□ -0.53
SYNM-202ENST00000336292 C8orf87E5RJ46 101 aa11.75□□□□□ -0.53
SYNM-202ENST00000336292 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
SYNM-202ENST00000336292 PRR26Q8N8Z3 221 aa11.72□□□□□ -0.53
SYNM-202ENST00000336292 KRTAP1-3Q8IUG1 177 aa11.72□□□□□ -0.53
SYNM-202ENST00000336292 RANBP2P49792 3224 aaKnown RBP11.7□□□□□ -0.54
SYNM-202ENST00000336292 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
SYNM-202ENST00000336292 TRIOO75962 3097 aa11.69□□□□□ -0.54
SYNM-202ENST00000336292 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
SYNM-202ENST00000336292 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
SYNM-202ENST00000336292 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
SYNM-202ENST00000336292 A0A096LNT2 108 aa11.68□□□□□ -0.54
SYNM-202ENST00000336292 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
SYNM-202ENST00000336292 C8orf17Q9NRJ1 99 aa11.67□□□□□ -0.54
SYNM-202ENST00000336292 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
SYNM-202ENST00000336292 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SYNM-202ENST00000336292 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
SYNM-202ENST00000336292 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
SYNM-202ENST00000336292 A0A1B0GVX0 72 aa11.64□□□□□ -0.55
SYNM-202ENST00000336292 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
SYNM-202ENST00000336292 ERC2-IT1O76042 136 aa11.64□□□□□ -0.55
SYNM-202ENST00000336292 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
SYNM-202ENST00000336292 COA5Q86WW8 74 aa11.63□□□□□ -0.55
SYNM-202ENST00000336292 KCNQ1DNQ9H478 68 aa11.63□□□□□ -0.55
SYNM-202ENST00000336292 Q8N377 158 aa11.63□□□□□ -0.55
SYNM-202ENST00000336292 LOC110117498A0A087WWA1 95 aa11.62□□□□□ -0.55
SYNM-202ENST00000336292 CRIPTQ9P021 101 aa11.62□□□□□ -0.55
SYNM-202ENST00000336292 CHD7Q9P2D1 2997 aa11.62□□□□□ -0.55
SYNM-202ENST00000336292 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
SYNM-202ENST00000336292 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
SYNM-202ENST00000336292 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
SYNM-202ENST00000336292 KRTAP1-1Q07627 177 aa11.6□□□□□ -0.55
SYNM-202ENST00000336292 FREM2Q5SZK8 3169 aa11.6□□□□□ -0.55
SYNM-202ENST00000336292 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
SYNM-202ENST00000336292 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SYNM-202ENST00000336292 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
SYNM-202ENST00000336292 ATRQ13535 2644 aa11.56□□□□□ -0.56
SYNM-202ENST00000336292 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.55□□□□□ -0.56
SYNM-202ENST00000336292 SPRR4Q96PI1 79 aa11.55□□□□□ -0.56
SYNM-202ENST00000336292 PRR34Q9NV39 138 aa11.53□□□□□ -0.56
SYNM-202ENST00000336292 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
SYNM-202ENST00000336292 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
SYNM-202ENST00000336292 CAMK2N1Q7Z7J9 78 aa11.5□□□□□ -0.57
SYNM-202ENST00000336292 MAST4O15021 2626 aa11.5□□□□□ -0.57
SYNM-202ENST00000336292 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
SYNM-202ENST00000336292 REV3LO60673 3130 aa11.48□□□□□ -0.57
SYNM-202ENST00000336292 MIR22HGQ0VDD5 57 aa11.47□□□□□ -0.57
SYNM-202ENST00000336292 LITAFQ99732 161 aa11.47□□□□□ -0.57
SYNM-202ENST00000336292 H3BPC8 53 aa11.47□□□□□ -0.57
SYNM-202ENST00000336292 Q5VSD8 79 aa11.47□□□□□ -0.57
SYNM-202ENST00000336292 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
SYNM-202ENST00000336292 A8MUN3 132 aa11.46□□□□□ -0.57
SYNM-202ENST00000336292 VPS13AQ96RL7 3174 aa11.45□□□□□ -0.58
SYNM-202ENST00000336292 UQCR11O14957 56 aa11.44□□□□□ -0.58
SYNM-202ENST00000336292 FLG2Q5D862 2391 aaPredicted RBP11.44□□□□□ -0.58
SYNM-202ENST00000336292 A0A1B0GW54 56 aa11.43□□□□□ -0.58
SYNM-202ENST00000336292 COL6A3P12111 3177 aa11.41□□□□□ -0.58
SYNM-202ENST00000336292 AKAP13Q12802 2813 aa11.41□□□□□ -0.58
SYNM-202ENST00000336292 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
SYNM-202ENST00000336292 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
SYNM-202ENST00000336292 SPEGQ15772 3267 aa11.35□□□□□ -0.59
SYNM-202ENST00000336292 HTTP42858 3142 aa11.34□□□□□ -0.59
SYNM-202ENST00000336292 TEX15Q9BXT5 2789 aa11.33□□□□□ -0.59
SYNM-202ENST00000336292 FAM104AQ969W3 186 aa11.33□□□□□ -0.6
SYNM-202ENST00000336292 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
SYNM-202ENST00000336292 VCANP13611 3396 aa11.3□□□□□ -0.6
SYNM-202ENST00000336292 CRYBG3Q68DQ2 2970 aa11.26□□□□□ -0.61
SYNM-202ENST00000336292 CDC42SE1Q9NRR8 79 aa11.25□□□□□ -0.61
SYNM-202ENST00000336292 S4R3F8 94 aa11.25□□□□□ -0.61
SYNM-202ENST00000336292 CENPEQ02224 2701 aa11.25□□□□□ -0.61
SYNM-202ENST00000336292 CFAP47Q6ZTR5 3102 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms