RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 C19orf73Q9NVV2 129 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
HMG20A-201ENST00000336216 Q6ZVQ6 151 aa4.42□□□□□ -1.7
HMG20A-201ENST00000336216 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
HMG20A-201ENST00000336216 BPY2O14599 106 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 LINC01547P58512 204 aaPredicted RBP4.41□□□□□ -1.7
HMG20A-201ENST00000336216 Q8NAQ8 132 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 C22orf24Q9Y442 160 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 H0Y9J4 135 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 M0R378 163 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 LINC01600Q96MT4 127 aa4.41□□□□□ -1.7
HMG20A-201ENST00000336216 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
HMG20A-201ENST00000336216 TRAV7A0A075B6U4 112 aa4.4□□□□□ -1.7
HMG20A-201ENST00000336216 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.7
HMG20A-201ENST00000336216 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.71
HMG20A-201ENST00000336216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
HMG20A-201ENST00000336216 TENM1Q9UKZ4 2725 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 COX17Q14061 63 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 EGFEM1PQ0D2K5 195 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 C1orf195Q5TG92 126 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 LINC00575Q6W349 94 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 TM2D3Q9BRN9 247 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
HMG20A-201ENST00000336216 VWFP04275 2813 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 PRLHP81277 87 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 LINC00474Q9P2X8 69 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 OXTP01178 125 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 OTOGQ6ZRI0 2925 aa4.38□□□□□ -1.71
HMG20A-201ENST00000336216 FAM30AQ9NZY2 134 aa4.37□□□□□ -1.71
HMG20A-201ENST00000336216 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
HMG20A-201ENST00000336216 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
HMG20A-201ENST00000336216 SMIM26A0A096LP01 95 aa4.37□□□□□ -1.71
HMG20A-201ENST00000336216 LINC00336Q6ZUF6 198 aa4.37□□□□□ -1.71
HMG20A-201ENST00000336216 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
HMG20A-201ENST00000336216 PDE6GP18545 87 aa4.36□□□□□ -1.71
HMG20A-201ENST00000336216 Q6ZQT0 140 aa4.36□□□□□ -1.71
HMG20A-201ENST00000336216 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
HMG20A-201ENST00000336216 TMEM254Q8TBM7 123 aa4.36□□□□□ -1.71
HMG20A-201ENST00000336216 B9D2Q9BPU9 175 aa4.35□□□□□ -1.71
HMG20A-201ENST00000336216 SEC61GP60059 68 aa4.35□□□□□ -1.71
HMG20A-201ENST00000336216 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
HMG20A-201ENST00000336216 LINC00588Q9Y4M8 146 aa4.34□□□□□ -1.71
HMG20A-201ENST00000336216 H7BZZ5 65 aa4.34□□□□□ -1.71
HMG20A-201ENST00000336216 CHTF8P0CG12 524 aa4.34□□□□□ -1.71
HMG20A-201ENST00000336216 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
HMG20A-201ENST00000336216 FAM168BA1KXE4 195 aa4.33□□□□□ -1.72
HMG20A-201ENST00000336216 NDUFB1O75438 58 aa4.33□□□□□ -1.72
HMG20A-201ENST00000336216 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
HMG20A-201ENST00000336216 C1orf137Q5JT78 98 aa4.33□□□□□ -1.72
HMG20A-201ENST00000336216 Q6ZRP5 223 aa4.33□□□□□ -1.72
HMG20A-201ENST00000336216 PSPHP1O15172 72 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 LINC01556Q5JQF7 62 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 Q8NDZ9 215 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 OBSCN-AS1Q96MR7 158 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 MDFIQ99750 246 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 KIAA0087Q14695 138 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 Q5XG85 94 aa4.32□□□□□ -1.72
HMG20A-201ENST00000336216 A0A087WSZ3 146 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 K7EIL1 84 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 PRYO14603 147 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 NDUFC1O43677 76 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 CASC10Q5T4H9 136 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 ST20-AS1Q8NBB2 130 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
HMG20A-201ENST00000336216 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 A0A1W2PNN7 141 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 TENM3Q9P273 2699 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 MP68P56378 58 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 IGKV4-1P06312 121 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 CXCL6P80162 114 aa4.3□□□□□ -1.72
HMG20A-201ENST00000336216 H3BQ85 93 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 DNAH10OSP0CZ25 163 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 C4orf48Q5BLP8 95 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 VPREB1P12018 145 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
HMG20A-201ENST00000336216 PHF5AQ7RTV0 110 aaKnown RBP4.29□□□□□ -1.72
HMG20A-201ENST00000336216 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 DMBT1Q9UGM3 2413 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-201ENST00000336216 NUPR2A6NF83 97 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 CIRBP-AS1Q8TBR5 109 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 Q9BRP9 147 aa4.28□□□□□ -1.72
HMG20A-201ENST00000336216 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
HMG20A-201ENST00000336216 IGLV6-57P01721 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms