RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
SHOX-201ENST00000334060 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
SHOX-201ENST00000334060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
SHOX-201ENST00000334060 FAM236AA0A1B0GUQ0 79 aa10.57□□□□□ -0.72
SHOX-201ENST00000334060 FAM236BA0A1B0GV22 79 aa10.57□□□□□ -0.72
SHOX-201ENST00000334060 OR13C6PQ8NH95 151 aa10.57□□□□□ -0.72
SHOX-201ENST00000334060 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 ATOX1O00244 68 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 TRACP01848 142 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 CRYGAP11844 174 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 XAGE1AQ9HD64 81 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 COX7CP15954 63 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 RPL18AQ02543 176 aaKnown RBP10.56□□□□□ -0.72
SHOX-201ENST00000334060 Q8NDZ9 215 aa10.56□□□□□ -0.72
SHOX-201ENST00000334060 NPC2P61916 151 aa10.55□□□□□ -0.72
SHOX-201ENST00000334060 FAM168BA1KXE4 195 aa10.54□□□□□ -0.72
SHOX-201ENST00000334060 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
SHOX-201ENST00000334060 C16orf90A8MZG2 172 aa10.52□□□□□ -0.72
SHOX-201ENST00000334060 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.72
SHOX-201ENST00000334060 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.72
SHOX-201ENST00000334060 LINC00158P58513 81 aa10.51□□□□□ -0.73
SHOX-201ENST00000334060 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
SHOX-201ENST00000334060 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
SHOX-201ENST00000334060 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
SHOX-201ENST00000334060 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
SHOX-201ENST00000334060 HIST1H4AP62805 103 aaKnown RBP10.49□□□□□ -0.73
SHOX-201ENST00000334060 TMEM258P61165 79 aa10.48□□□□□ -0.73
SHOX-201ENST00000334060 CLEC2BQ92478 149 aa10.48□□□□□ -0.73
SHOX-201ENST00000334060 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
SHOX-201ENST00000334060 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
SHOX-201ENST00000334060 LOC107984640A0A0U1RRK4 108 aa10.47□□□□□ -0.73
SHOX-201ENST00000334060 SERTAD4-AS1Q5TG53 156 aa10.47□□□□□ -0.73
SHOX-201ENST00000334060 TLX1NBP0CAT3 122 aa10.46□□□□□ -0.73
SHOX-201ENST00000334060 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
SHOX-201ENST00000334060 FAT1Q14517 4588 aa10.46□□□□□ -0.73
SHOX-201ENST00000334060 F8WDY8 70 aa10.45□□□□□ -0.74
SHOX-201ENST00000334060 SPACA4Q8TDM5 124 aa10.45□□□□□ -0.74
SHOX-201ENST00000334060 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
SHOX-201ENST00000334060 RYR1P21817 5038 aa10.44□□□□□ -0.74
SHOX-201ENST00000334060 HSPG2P98160 4391 aa10.44□□□□□ -0.74
SHOX-201ENST00000334060 BAALC-AS2P0C853 105 aa10.43□□□□□ -0.74
SHOX-201ENST00000334060 Q6ZSA8 131 aa10.43□□□□□ -0.74
SHOX-201ENST00000334060 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
SHOX-201ENST00000334060 A0A087WYN8 130 aa10.43□□□□□ -0.74
SHOX-201ENST00000334060 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
SHOX-201ENST00000334060 BIRC6Q9NR09 4857 aa10.43□□□□□ -0.74
SHOX-201ENST00000334060 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
SHOX-201ENST00000334060 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
SHOX-201ENST00000334060 Q6JHZ5 121 aa10.41□□□□□ -0.74
SHOX-201ENST00000334060 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
SHOX-201ENST00000334060 COX17Q14061 63 aa10.41□□□□□ -0.74
SHOX-201ENST00000334060 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
SHOX-201ENST00000334060 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
SHOX-201ENST00000334060 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
SHOX-201ENST00000334060 DPH3Q96FX2 82 aa10.39□□□□□ -0.75
SHOX-201ENST00000334060 S100A7L2Q5SY68 101 aa10.39□□□□□ -0.75
SHOX-201ENST00000334060 PHF5AQ7RTV0 110 aaKnown RBP10.38□□□□□ -0.75
SHOX-201ENST00000334060 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
SHOX-201ENST00000334060 H0YGX0 51 aa10.37□□□□□ -0.75
SHOX-201ENST00000334060 NCR3O14931 201 aa10.37□□□□□ -0.75
SHOX-201ENST00000334060 VPREB1P12018 145 aa10.37□□□□□ -0.75
SHOX-201ENST00000334060 DNAL4O96015 105 aa10.36□□□□□ -0.75
SHOX-201ENST00000334060 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
SHOX-201ENST00000334060 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
SHOX-201ENST00000334060 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
SHOX-201ENST00000334060 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
SHOX-201ENST00000334060 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
SHOX-201ENST00000334060 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
SHOX-201ENST00000334060 BCE1O60756 84 aa10.33□□□□□ -0.76
SHOX-201ENST00000334060 NDUFC2O95298 119 aa10.33□□□□□ -0.76
SHOX-201ENST00000334060 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
SHOX-201ENST00000334060 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
SHOX-201ENST00000334060 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
SHOX-201ENST00000334060 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
SHOX-201ENST00000334060 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
SHOX-201ENST00000334060 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
SHOX-201ENST00000334060 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
SHOX-201ENST00000334060 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
SHOX-201ENST00000334060 LINC00474Q9P2X8 69 aa10.28□□□□□ -0.76
SHOX-201ENST00000334060 TRBV10-3A0A0K0K1G6 114 aa10.28□□□□□ -0.76
SHOX-201ENST00000334060 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
SHOX-201ENST00000334060 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
SHOX-201ENST00000334060 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
SHOX-201ENST00000334060 NKAPP1Q8N9T2 125 aa10.25□□□□□ -0.77
SHOX-201ENST00000334060 SRRM2Q9UQ35 2752 aaKnown RBP10.25□□□□□ -0.77
SHOX-201ENST00000334060 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
SHOX-201ENST00000334060 PKIGQ9Y2B9 76 aa10.23□□□□□ -0.77
SHOX-201ENST00000334060 HERC2O95714 4834 aa10.22□□□□□ -0.77
SHOX-201ENST00000334060 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.77
SHOX-201ENST00000334060 IGLV1-50A0A075B6I6 118 aa10.21□□□□□ -0.78
SHOX-201ENST00000334060 M0R378 163 aa10.21□□□□□ -0.78
SHOX-201ENST00000334060 UBE2BP63146 152 aa10.21□□□□□ -0.78
SHOX-201ENST00000334060 CDK2AP2O75956 126 aa10.2□□□□□ -0.78
SHOX-201ENST00000334060 CCKP06307 115 aa10.2□□□□□ -0.78
SHOX-201ENST00000334060 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
SHOX-201ENST00000334060 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
SHOX-201ENST00000334060 IGLV6-57P01721 117 aa10.19□□□□□ -0.78
SHOX-201ENST00000334060 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
SHOX-201ENST00000334060 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
SHOX-201ENST00000334060 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms