RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 EPM2AB3EWF7 344 aa10.46□□□□□ -0.74
SLIT3-201ENST00000332966 IGLV5-48A0A075B6I7 105 aa10.45□□□□□ -0.74
SLIT3-201ENST00000332966 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
SLIT3-201ENST00000332966 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
SLIT3-201ENST00000332966 OXTP01178 125 aa10.43□□□□□ -0.74
SLIT3-201ENST00000332966 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
SLIT3-201ENST00000332966 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
SLIT3-201ENST00000332966 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
SLIT3-201ENST00000332966 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
SLIT3-201ENST00000332966 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
SLIT3-201ENST00000332966 F8P00451 2351 aa10.41□□□□□ -0.74
SLIT3-201ENST00000332966 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
SLIT3-201ENST00000332966 C8orf87E5RJ46 101 aa10.39□□□□□ -0.75
SLIT3-201ENST00000332966 TLX1NBP0CAT3 122 aa10.39□□□□□ -0.75
SLIT3-201ENST00000332966 BRCA2P51587 3418 aa10.39□□□□□ -0.75
SLIT3-201ENST00000332966 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
SLIT3-201ENST00000332966 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
SLIT3-201ENST00000332966 SPINK1P00995 79 aa10.36□□□□□ -0.75
SLIT3-201ENST00000332966 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
SLIT3-201ENST00000332966 C7orf65Q6ZTY9 151 aa10.35□□□□□ -0.75
SLIT3-201ENST00000332966 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
SLIT3-201ENST00000332966 LAMA3Q16787 3333 aa10.34□□□□□ -0.75
SLIT3-201ENST00000332966 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
SLIT3-201ENST00000332966 A0A0G2JQZ4 141 aa10.32□□□□□ -0.76
SLIT3-201ENST00000332966 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
SLIT3-201ENST00000332966 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
SLIT3-201ENST00000332966 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
SLIT3-201ENST00000332966 DSCR10P59022 87 aa10.31□□□□□ -0.76
SLIT3-201ENST00000332966 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
SLIT3-201ENST00000332966 Q8NDZ9 215 aa10.3□□□□□ -0.76
SLIT3-201ENST00000332966 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
SLIT3-201ENST00000332966 UNC80Q8N2C7 3258 aa10.3□□□□□ -0.76
SLIT3-201ENST00000332966 C8orf17Q9NRJ1 99 aa10.3□□□□□ -0.76
SLIT3-201ENST00000332966 CDC42SE1Q9NRR8 79 aa10.29□□□□□ -0.76
SLIT3-201ENST00000332966 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
SLIT3-201ENST00000332966 LCA10Q71F78 164 aa10.27□□□□□ -0.77
SLIT3-201ENST00000332966 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
SLIT3-201ENST00000332966 UQCR11O14957 56 aa10.24□□□□□ -0.77
SLIT3-201ENST00000332966 TRIOO75962 3097 aa10.23□□□□□ -0.77
SLIT3-201ENST00000332966 A0A1B0GVX0 72 aa10.23□□□□□ -0.77
SLIT3-201ENST00000332966 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
SLIT3-201ENST00000332966 LINC00313P59037 77 aa10.23□□□□□ -0.77
SLIT3-201ENST00000332966 MGAQ8IWI9 3026 aa10.19□□□□□ -0.78
SLIT3-201ENST00000332966 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
SLIT3-201ENST00000332966 LY6G6CO95867 125 aa10.18□□□□□ -0.78
SLIT3-201ENST00000332966 NBEAQ8NFP9 2946 aa10.17□□□□□ -0.78
SLIT3-201ENST00000332966 Q75L30 129 aa10.17□□□□□ -0.78
SLIT3-201ENST00000332966 CR1P17927 2039 aa10.17□□□□□ -0.78
SLIT3-201ENST00000332966 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
SLIT3-201ENST00000332966 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
SLIT3-201ENST00000332966 MDFIQ99750 246 aa10.16□□□□□ -0.78
SLIT3-201ENST00000332966 IGLV7-46A0A075B6I9 117 aa10.15□□□□□ -0.78
SLIT3-201ENST00000332966 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.78
SLIT3-201ENST00000332966 C1orf134Q5TEV5 83 aa10.14□□□□□ -0.79
SLIT3-201ENST00000332966 DSPP15924 2871 aaKnown RBP10.14□□□□□ -0.79
SLIT3-201ENST00000332966 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
SLIT3-201ENST00000332966 NBDYA0A0U1RRE5 68 aa10.13□□□□□ -0.79
SLIT3-201ENST00000332966 RBM12B-AS1Q9P1G2 102 aa10.12□□□□□ -0.79
SLIT3-201ENST00000332966 CASC10Q5T4H9 136 aa10.11□□□□□ -0.79
SLIT3-201ENST00000332966 SPACA4Q8TDM5 124 aa10.11□□□□□ -0.79
SLIT3-201ENST00000332966 FRYQ5TBA9 3013 aa10.11□□□□□ -0.79
SLIT3-201ENST00000332966 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
SLIT3-201ENST00000332966 Q5VV11 94 aa10.1□□□□□ -0.79
SLIT3-201ENST00000332966 KRTAP1-3Q8IUG1 177 aa10.09□□□□□ -0.79
SLIT3-201ENST00000332966 SPRR1AP35321 89 aa10.08□□□□□ -0.8
SLIT3-201ENST00000332966 FLNAP21333 2647 aaKnown RBP10.08□□□□□ -0.8
SLIT3-201ENST00000332966 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
SLIT3-201ENST00000332966 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
SLIT3-201ENST00000332966 RTL8CO15255 209 aa10.07□□□□□ -0.8
SLIT3-201ENST00000332966 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
SLIT3-201ENST00000332966 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
SLIT3-201ENST00000332966 LINC01558Q9Y6Z2 57 aa10.06□□□□□ -0.8
SLIT3-201ENST00000332966 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
SLIT3-201ENST00000332966 DNAH14Q0VDD8 3507 aa10.05□□□□□ -0.8
SLIT3-201ENST00000332966 CDH23Q9H251 3354 aa10.04□□□□□ -0.8
SLIT3-201ENST00000332966 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
SLIT3-201ENST00000332966 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
SLIT3-201ENST00000332966 CENPEQ02224 2701 aa10.03□□□□□ -0.8
SLIT3-201ENST00000332966 LAMA1P25391 3075 aa10.03□□□□□ -0.8
SLIT3-201ENST00000332966 KRTAP24-1Q3LI83 254 aa10.02□□□□□ -0.81
SLIT3-201ENST00000332966 ZNF861PO60384 105 aa10.01□□□□□ -0.81
SLIT3-201ENST00000332966 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
SLIT3-201ENST00000332966 KRTAP1-1Q07627 177 aa10□□□□□ -0.81
SLIT3-201ENST00000332966 ZNF292O60281 2723 aa9.99□□□□□ -0.81
SLIT3-201ENST00000332966 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
SLIT3-201ENST00000332966 USP24Q9UPU5 2620 aa9.98□□□□□ -0.81
SLIT3-201ENST00000332966 ITPR3Q14573 2671 aa9.97□□□□□ -0.81
SLIT3-201ENST00000332966 VCANP13611 3396 aa9.96□□□□□ -0.82
SLIT3-201ENST00000332966 TNP2Q05952 138 aa9.96□□□□□ -0.82
SLIT3-201ENST00000332966 Q96NJ1 140 aa9.96□□□□□ -0.82
SLIT3-201ENST00000332966 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
SLIT3-201ENST00000332966 ZCCHC13Q8WW36 166 aaKnown RBP9.94□□□□□ -0.82
SLIT3-201ENST00000332966 CHD6Q8TD26 2715 aa9.94□□□□□ -0.82
SLIT3-201ENST00000332966 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
SLIT3-201ENST00000332966 LINC00472Q9H8W2 130 aa9.93□□□□□ -0.82
SLIT3-201ENST00000332966 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
SLIT3-201ENST00000332966 ATRQ13535 2644 aa9.92□□□□□ -0.82
SLIT3-201ENST00000332966 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
SLIT3-201ENST00000332966 FREM2Q5SZK8 3169 aa9.91□□□□□ -0.82
SLIT3-201ENST00000332966 GCN1Q92616 2671 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms