RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 COPS9Q8WXC6 57 aa8.37□□□□□ -1.07
LIMS1-201ENST00000332345 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
LIMS1-201ENST00000332345 IGLV6-57P01721 117 aa8.36□□□□□ -1.07
LIMS1-201ENST00000332345 PCP2Q8IVA1 136 aa8.36□□□□□ -1.07
LIMS1-201ENST00000332345 SPANXCQ9NY87 97 aa8.36□□□□□ -1.07
LIMS1-201ENST00000332345 CBY1Q9Y3M2 126 aa8.36□□□□□ -1.07
LIMS1-201ENST00000332345 CRYGAP11844 174 aa8.35□□□□□ -1.07
LIMS1-201ENST00000332345 Q6ZVH6 145 aa8.35□□□□□ -1.07
LIMS1-201ENST00000332345 HIGD2AQ9BW72 106 aa8.35□□□□□ -1.07
LIMS1-201ENST00000332345 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
LIMS1-201ENST00000332345 LINC00518Q8N0U6 118 aa8.34□□□□□ -1.07
LIMS1-201ENST00000332345 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
LIMS1-201ENST00000332345 IFITM1P13164 125 aa8.33□□□□□ -1.08
LIMS1-201ENST00000332345 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
LIMS1-201ENST00000332345 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
LIMS1-201ENST00000332345 OR13C6PQ8NH95 151 aa8.32□□□□□ -1.08
LIMS1-201ENST00000332345 ANAPC11Q9NYG5 84 aa8.32□□□□□ -1.08
LIMS1-201ENST00000332345 B5MCH6 92 aa8.31□□□□□ -1.08
LIMS1-201ENST00000332345 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-201ENST00000332345 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
LIMS1-201ENST00000332345 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
LIMS1-201ENST00000332345 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-201ENST00000332345 A0A087X002 238 aa8.3□□□□□ -1.08
LIMS1-201ENST00000332345 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
LIMS1-201ENST00000332345 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
LIMS1-201ENST00000332345 JOSD1Q15040 202 aaPredicted RBP8.29□□□□□ -1.08
LIMS1-201ENST00000332345 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
LIMS1-201ENST00000332345 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
LIMS1-201ENST00000332345 Q6ZRX8 168 aa8.27□□□□□ -1.09
LIMS1-201ENST00000332345 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
LIMS1-201ENST00000332345 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
LIMS1-201ENST00000332345 Q9BRP9 147 aa8.24□□□□□ -1.09
LIMS1-201ENST00000332345 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
LIMS1-201ENST00000332345 A6NDN8 102 aa8.23□□□□□ -1.09
LIMS1-201ENST00000332345 COX8AP10176 69 aa8.23□□□□□ -1.09
LIMS1-201ENST00000332345 DLEU1O43261 78 aa8.22□□□□□ -1.09
LIMS1-201ENST00000332345 ERC2-IT1O76042 136 aa8.22□□□□□ -1.09
LIMS1-201ENST00000332345 GAGE2AQ6NT46 116 aa8.21□□□□□ -1.1
LIMS1-201ENST00000332345 VAMP8Q9BV40 100 aa8.21□□□□□ -1.1
LIMS1-201ENST00000332345 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.1
LIMS1-201ENST00000332345 TSPAN13O95857 204 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 COX7BP24311 80 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 SPATA45Q537H7 98 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 HIST1H4GQ99525 98 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
LIMS1-201ENST00000332345 TRBV7-6A0A0J9YX20 115 aa8.19□□□□□ -1.1
LIMS1-201ENST00000332345 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
LIMS1-201ENST00000332345 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
LIMS1-201ENST00000332345 C14orf144Q96I85 54 aa8.19□□□□□ -1.1
LIMS1-201ENST00000332345 ELOF1P60002 83 aaKnown RBP8.18□□□□□ -1.1
LIMS1-201ENST00000332345 CTAG1AP78358 180 aa8.18□□□□□ -1.1
LIMS1-201ENST00000332345 TMA7Q9Y2S6 64 aaKnown RBP8.18□□□□□ -1.1
LIMS1-201ENST00000332345 A4D1N5 150 aa8.17□□□□□ -1.1
LIMS1-201ENST00000332345 A0A1B0GWB2 263 aa8.16□□□□□ -1.1
LIMS1-201ENST00000332345 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
LIMS1-201ENST00000332345 SLC25A34Q6PIV7 304 aa8.16□□□□□ -1.1
LIMS1-201ENST00000332345 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
LIMS1-201ENST00000332345 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
LIMS1-201ENST00000332345 SMIM11BQ8TCY0 68 aa8.14□□□□□ -1.11
LIMS1-201ENST00000332345 HIGD1BQ9P298 99 aa8.14□□□□□ -1.11
LIMS1-201ENST00000332345 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
LIMS1-201ENST00000332345 VAMP3Q15836 100 aa8.13□□□□□ -1.11
LIMS1-201ENST00000332345 PRR4Q16378 134 aa8.13□□□□□ -1.11
LIMS1-201ENST00000332345 PYY3Q5JQD4 70 aa8.12□□□□□ -1.11
LIMS1-201ENST00000332345 Q8NBF4 154 aa8.12□□□□□ -1.11
LIMS1-201ENST00000332345 MOBPQ13875 183 aa8.11□□□□□ -1.11
LIMS1-201ENST00000332345 TAL2Q16559 108 aa8.11□□□□□ -1.11
LIMS1-201ENST00000332345 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
LIMS1-201ENST00000332345 SPRR1BP22528 89 aa8.1□□□□□ -1.11
LIMS1-201ENST00000332345 SLC25A20O43772 301 aa8.09□□□□□ -1.11
LIMS1-201ENST00000332345 DEFB105AQ8NG35 78 aa8.09□□□□□ -1.11
LIMS1-201ENST00000332345 C12orf57Q99622 126 aa8.09□□□□□ -1.11
LIMS1-201ENST00000332345 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
LIMS1-201ENST00000332345 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
LIMS1-201ENST00000332345 SPINK1P00995 79 aa8.08□□□□□ -1.12
LIMS1-201ENST00000332345 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
LIMS1-201ENST00000332345 C2orf91Q6ZV80 131 aa8.08□□□□□ -1.12
LIMS1-201ENST00000332345 LRP2P98164 4655 aa8.08□□□□□ -1.12
LIMS1-201ENST00000332345 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
LIMS1-201ENST00000332345 CFC1P0CG37 223 aa8.07□□□□□ -1.12
LIMS1-201ENST00000332345 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
LIMS1-201ENST00000332345 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
LIMS1-201ENST00000332345 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
LIMS1-201ENST00000332345 CEND1Q8N111 149 aa8.05□□□□□ -1.12
LIMS1-201ENST00000332345 LINC00575Q6W349 94 aa8.04□□□□□ -1.12
LIMS1-201ENST00000332345 LPAP08519 4548 aa8.03□□□□□ -1.12
LIMS1-201ENST00000332345 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
LIMS1-201ENST00000332345 hADV29S1A0JD25 119 aa8.03□□□□□ -1.12
LIMS1-201ENST00000332345 H7C2G1 150 aa8.03□□□□□ -1.12
LIMS1-201ENST00000332345 RETNLBQ9BQ08 111 aa8.03□□□□□ -1.12
LIMS1-201ENST00000332345 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
LIMS1-201ENST00000332345 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
LIMS1-201ENST00000332345 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
LIMS1-201ENST00000332345 Q1RN00 199 aa8.01□□□□□ -1.13
LIMS1-201ENST00000332345 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
LIMS1-201ENST00000332345 SNCGO76070 127 aa8□□□□□ -1.13
LIMS1-201ENST00000332345 PRO1854Q9UHT4 67 aa8□□□□□ -1.13
LIMS1-201ENST00000332345 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms