RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SCXQ7RTU7 201 aa10.51□□□□□ -0.73
PDGFB-201ENST00000331163 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
PDGFB-201ENST00000331163 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
PDGFB-201ENST00000331163 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
PDGFB-201ENST00000331163 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
PDGFB-201ENST00000331163 C15orf56Q8N910 161 aa10.49□□□□□ -0.73
PDGFB-201ENST00000331163 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
PDGFB-201ENST00000331163 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
PDGFB-201ENST00000331163 C1orf134Q5TEV5 83 aa10.48□□□□□ -0.73
PDGFB-201ENST00000331163 CCKP06307 115 aa10.47□□□□□ -0.73
PDGFB-201ENST00000331163 Q6ZRP5 223 aa10.45□□□□□ -0.74
PDGFB-201ENST00000331163 TRBV10-3A0A0K0K1G6 114 aa10.44□□□□□ -0.74
PDGFB-201ENST00000331163 A0A096LNI7 61 aa10.43□□□□□ -0.74
PDGFB-201ENST00000331163 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
PDGFB-201ENST00000331163 RPS28P62857 69 aaKnown RBP10.43□□□□□ -0.74
PDGFB-201ENST00000331163 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
PDGFB-201ENST00000331163 NDUFC2-KCTD14E9PQ53 114 aa10.42□□□□□ -0.74
PDGFB-201ENST00000331163 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
PDGFB-201ENST00000331163 Q8N814 137 aa10.42□□□□□ -0.74
PDGFB-201ENST00000331163 LRCOL1A6NCL2 159 aa10.41□□□□□ -0.74
PDGFB-201ENST00000331163 JMJD7-PLA2G4BH0Y9G9 81 aa10.41□□□□□ -0.74
PDGFB-201ENST00000331163 TMEM256-PLSCR3K7ERE1 68 aa10.41□□□□□ -0.74
PDGFB-201ENST00000331163 RBM3P98179 157 aaKnown RBP10.39□□□□□ -0.75
PDGFB-201ENST00000331163 ETDCA0A1B0GVM5 59 aa10.39□□□□□ -0.75
PDGFB-201ENST00000331163 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
PDGFB-201ENST00000331163 PRKDCP78527 4128 aaKnown RBP10.37□□□□□ -0.75
PDGFB-201ENST00000331163 Q5XG85 94 aa10.36□□□□□ -0.75
PDGFB-201ENST00000331163 SRRM2Q9UQ35 2752 aaKnown RBP10.36□□□□□ -0.75
PDGFB-201ENST00000331163 HUWE1Q7Z6Z7 4374 aaKnown RBP10.36□□□□□ -0.75
PDGFB-201ENST00000331163 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 F8WEM9 126 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 Q6ZQY7 126 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 C14orf177Q52M58 125 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
PDGFB-201ENST00000331163 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
PDGFB-201ENST00000331163 NDUFC2O95298 119 aa10.34□□□□□ -0.75
PDGFB-201ENST00000331163 Q8NDZ9 215 aa10.34□□□□□ -0.75
PDGFB-201ENST00000331163 TNP2Q05952 138 aa10.34□□□□□ -0.75
PDGFB-201ENST00000331163 COX17Q14061 63 aa10.33□□□□□ -0.76
PDGFB-201ENST00000331163 Q8N9L7 120 aa10.32□□□□□ -0.76
PDGFB-201ENST00000331163 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
PDGFB-201ENST00000331163 GVQW2A0A096LPI5 108 aaPredicted RBP10.31□□□□□ -0.76
PDGFB-201ENST00000331163 PRLHP81277 87 aa10.31□□□□□ -0.76
PDGFB-201ENST00000331163 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
PDGFB-201ENST00000331163 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
PDGFB-201ENST00000331163 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
PDGFB-201ENST00000331163 UBE2AP49459 152 aa10.3□□□□□ -0.76
PDGFB-201ENST00000331163 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
PDGFB-201ENST00000331163 Q6ZVQ6 151 aa10.3□□□□□ -0.76
PDGFB-201ENST00000331163 ZNF73O43830 326 aaPredicted RBP10.29□□□□□ -0.76
PDGFB-201ENST00000331163 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
PDGFB-201ENST00000331163 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
PDGFB-201ENST00000331163 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
PDGFB-201ENST00000331163 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
PDGFB-201ENST00000331163 RTL8CO15255 209 aa10.28□□□□□ -0.76
PDGFB-201ENST00000331163 BRK1Q8WUW1 75 aa10.28□□□□□ -0.76
PDGFB-201ENST00000331163 COX7BP24311 80 aa10.28□□□□□ -0.76
PDGFB-201ENST00000331163 M0R378 163 aa10.27□□□□□ -0.76
PDGFB-201ENST00000331163 A0A087WTM6 91 aa10.27□□□□□ -0.77
PDGFB-201ENST00000331163 H7BZZ5 65 aa10.27□□□□□ -0.77
PDGFB-201ENST00000331163 LINC00167Q96N53 147 aa10.27□□□□□ -0.77
PDGFB-201ENST00000331163 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
PDGFB-201ENST00000331163 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
PDGFB-201ENST00000331163 Q6ZQT0 140 aa10.26□□□□□ -0.77
PDGFB-201ENST00000331163 CMYA5Q8N3K9 4069 aa10.26□□□□□ -0.77
PDGFB-201ENST00000331163 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
PDGFB-201ENST00000331163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
PDGFB-201ENST00000331163 A0A1W2PNN7 141 aa10.23□□□□□ -0.77
PDGFB-201ENST00000331163 SERP1Q9Y6X1 66 aa10.23□□□□□ -0.77
PDGFB-201ENST00000331163 DNAH9Q9NYC9 4486 aa10.22□□□□□ -0.77
PDGFB-201ENST00000331163 VPREB1P12018 145 aa10.21□□□□□ -0.77
PDGFB-201ENST00000331163 LYSTQ99698 3801 aa10.21□□□□□ -0.78
PDGFB-201ENST00000331163 C3orf84H3BNL1 204 aa10.21□□□□□ -0.78
PDGFB-201ENST00000331163 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
PDGFB-201ENST00000331163 SMR3BP02814 79 aaPredicted RBP10.19□□□□□ -0.78
PDGFB-201ENST00000331163 TRBV7-6A0A0J9YX20 115 aa10.19□□□□□ -0.78
PDGFB-201ENST00000331163 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
PDGFB-201ENST00000331163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
PDGFB-201ENST00000331163 PANO1I0J062 215 aa10.17□□□□□ -0.78
PDGFB-201ENST00000331163 NREPQ16612 68 aa10.17□□□□□ -0.78
PDGFB-201ENST00000331163 BPY2O14599 106 aa10.16□□□□□ -0.78
PDGFB-201ENST00000331163 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
PDGFB-201ENST00000331163 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
PDGFB-201ENST00000331163 C16orf90A8MZG2 172 aa10.15□□□□□ -0.79
PDGFB-201ENST00000331163 KRTAP10-2P60368 255 aa10.15□□□□□ -0.79
PDGFB-201ENST00000331163 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.79
PDGFB-201ENST00000331163 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.79
PDGFB-201ENST00000331163 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
PDGFB-201ENST00000331163 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
PDGFB-201ENST00000331163 PRO0628Q9UI54 55 aa10.14□□□□□ -0.79
PDGFB-201ENST00000331163 A0A0G2JQZ4 141 aa10.13□□□□□ -0.79
PDGFB-201ENST00000331163 SEC61GP60059 68 aa10.13□□□□□ -0.79
PDGFB-201ENST00000331163 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
PDGFB-201ENST00000331163 PRR4Q16378 134 aa10.12□□□□□ -0.79
PDGFB-201ENST00000331163 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
PDGFB-201ENST00000331163 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
PDGFB-201ENST00000331163 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
PDGFB-201ENST00000331163 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
PDGFB-201ENST00000331163 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms