RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 FUSP35637 526 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLSTN3-202ENST00000331148 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
CLSTN3-202ENST00000331148 APOC4P55056 127 aa12.03□□□□□ -0.48
CLSTN3-202ENST00000331148 ESRGQ1W209 222 aa12.02□□□□□ -0.49
CLSTN3-202ENST00000331148 LYRM9A8MSI8 78 aa12.02□□□□□ -0.49
CLSTN3-202ENST00000331148 Q6ZTC4 211 aa12.01□□□□□ -0.49
CLSTN3-202ENST00000331148 VPREB1P12018 145 aa12□□□□□ -0.49
CLSTN3-202ENST00000331148 CELA1Q9UNI1 258 aa12□□□□□ -0.49
CLSTN3-202ENST00000331148 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 HIGD2AQ9BW72 106 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 STAB1Q9NY15 2570 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 DEFB4AO15263 64 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 KLK12Q9UKR0 248 aa11.99□□□□□ -0.49
CLSTN3-202ENST00000331148 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
CLSTN3-202ENST00000331148 F8WDY8 70 aa11.97□□□□□ -0.49
CLSTN3-202ENST00000331148 KRTAP10-11P60412 298 aa11.97□□□□□ -0.49
CLSTN3-202ENST00000331148 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
CLSTN3-202ENST00000331148 EGFEM1PQ0D2K5 195 aa11.97□□□□□ -0.49
CLSTN3-202ENST00000331148 M0R378 163 aa11.96□□□□□ -0.49
CLSTN3-202ENST00000331148 LELP1Q5T871 98 aa11.96□□□□□ -0.49
CLSTN3-202ENST00000331148 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
CLSTN3-202ENST00000331148 DAD1P61803 113 aa11.95□□□□□ -0.5
CLSTN3-202ENST00000331148 HIGD2BQ4VC39 106 aa11.94□□□□□ -0.5
CLSTN3-202ENST00000331148 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
CLSTN3-202ENST00000331148 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
CLSTN3-202ENST00000331148 SMIM29Q86T20 159 aa11.9□□□□□ -0.5
CLSTN3-202ENST00000331148 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
CLSTN3-202ENST00000331148 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
CLSTN3-202ENST00000331148 V9GYY9 64 aa11.88□□□□□ -0.51
CLSTN3-202ENST00000331148 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
CLSTN3-202ENST00000331148 hDV103S1A0JD37 113 aa11.88□□□□□ -0.51
CLSTN3-202ENST00000331148 HTN3P15516 51 aa11.88□□□□□ -0.51
CLSTN3-202ENST00000331148 LCE6AA0A183 80 aa11.87□□□□□ -0.51
CLSTN3-202ENST00000331148 Q8NAQ8 132 aa11.87□□□□□ -0.51
CLSTN3-202ENST00000331148 Q6ZRU5 148 aa11.86□□□□□ -0.51
CLSTN3-202ENST00000331148 DEFB105AQ8NG35 78 aa11.85□□□□□ -0.51
CLSTN3-202ENST00000331148 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
CLSTN3-202ENST00000331148 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
CLSTN3-202ENST00000331148 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-202ENST00000331148 Q8N377 158 aa11.84□□□□□ -0.51
CLSTN3-202ENST00000331148 SPART-AS1P0CW21 52 aa11.81□□□□□ -0.52
CLSTN3-202ENST00000331148 C1orf64Q8NEQ6 169 aa11.8□□□□□ -0.52
CLSTN3-202ENST00000331148 Q1T7F1 81 aa11.8□□□□□ -0.52
CLSTN3-202ENST00000331148 Q6ZRP5 223 aa11.8□□□□□ -0.52
CLSTN3-202ENST00000331148 ZCCHC13Q8WW36 166 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-202ENST00000331148 MDFIQ99750 246 aa11.8□□□□□ -0.52
CLSTN3-202ENST00000331148 A0A1W2PNM2 257 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 LRCOL1A6NCL2 159 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 A0A1B0GW54 56 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 PRR15Q8IV56 129 aa11.79□□□□□ -0.52
CLSTN3-202ENST00000331148 SEC61GP60059 68 aa11.78□□□□□ -0.52
CLSTN3-202ENST00000331148 KCNQ1DNQ9H478 68 aa11.78□□□□□ -0.52
CLSTN3-202ENST00000331148 RETNQ9HD89 108 aa11.77□□□□□ -0.52
CLSTN3-202ENST00000331148 ETDCA0A1B0GVM5 59 aa11.75□□□□□ -0.53
CLSTN3-202ENST00000331148 WFDC10BQ8IUB3 73 aa11.75□□□□□ -0.53
CLSTN3-202ENST00000331148 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
CLSTN3-202ENST00000331148 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
CLSTN3-202ENST00000331148 PRB2P02812 416 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 DSCR10P59022 87 aa11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 TNP2Q05952 138 aa11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 Q8NBF4 154 aa11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 ANK2Q01484 3957 aa11.73□□□□□ -0.53
CLSTN3-202ENST00000331148 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-202ENST00000331148 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
CLSTN3-202ENST00000331148 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
CLSTN3-202ENST00000331148 DHRS4-AS1Q9P1J3 65 aa11.71□□□□□ -0.53
CLSTN3-202ENST00000331148 K7EQZ3 153 aa11.71□□□□□ -0.54
CLSTN3-202ENST00000331148 K7EIL1 84 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 Q6ZRX8 168 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 CYP4F30PQ9H0H9 118 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 NOTCH1P46531 2555 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 PSPHP1O15172 72 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 Q9BRP9 147 aa11.69□□□□□ -0.54
CLSTN3-202ENST00000331148 TRAV22A0A0B4J277 110 aa11.67□□□□□ -0.54
CLSTN3-202ENST00000331148 ST20-AS1Q8NBB2 130 aa11.67□□□□□ -0.54
CLSTN3-202ENST00000331148 SYCNQ0VAF6 134 aa11.66□□□□□ -0.54
CLSTN3-202ENST00000331148 PRR4Q16378 134 aa11.66□□□□□ -0.54
CLSTN3-202ENST00000331148 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.55
CLSTN3-202ENST00000331148 PMAIP1Q13794 54 aa11.65□□□□□ -0.55
CLSTN3-202ENST00000331148 HCG22E2RYF7 251 aa11.64□□□□□ -0.55
CLSTN3-202ENST00000331148 NBEAL1Q6ZS30 2694 aa11.64□□□□□ -0.55
CLSTN3-202ENST00000331148 RPL37AP8A6NKH3 93 aa11.63□□□□□ -0.55
CLSTN3-202ENST00000331148 PSCAO43653 123 aa11.62□□□□□ -0.55
CLSTN3-202ENST00000331148 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
CLSTN3-202ENST00000331148 SPRR1AP35321 89 aa11.6□□□□□ -0.55
CLSTN3-202ENST00000331148 MGAM2Q2M2H8 2515 aa11.6□□□□□ -0.55
CLSTN3-202ENST00000331148 IGKV2D-24A0A075B6R9 120 aa11.6□□□□□ -0.55
CLSTN3-202ENST00000331148 H3BNG1 76 aa11.6□□□□□ -0.55
CLSTN3-202ENST00000331148 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
CLSTN3-202ENST00000331148 NDUFB1O75438 58 aa11.59□□□□□ -0.55
CLSTN3-202ENST00000331148 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.55
CLSTN3-202ENST00000331148 TENM3Q9P273 2699 aa11.57□□□□□ -0.56
CLSTN3-202ENST00000331148 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
CLSTN3-202ENST00000331148 A8MUN3 132 aa11.57□□□□□ -0.56
CLSTN3-202ENST00000331148 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms