RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KRTDAPP60985 99 aa8.44□□□□□ -1.06
CTHRC1-201ENST00000330295 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CTHRC1-201ENST00000330295 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
CTHRC1-201ENST00000330295 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
CTHRC1-201ENST00000330295 C3orf79P0CE67 100 aa8.42□□□□□ -1.06
CTHRC1-201ENST00000330295 FAM19A1Q7Z5A9 133 aa8.41□□□□□ -1.06
CTHRC1-201ENST00000330295 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
CTHRC1-201ENST00000330295 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
CTHRC1-201ENST00000330295 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
CTHRC1-201ENST00000330295 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
CTHRC1-201ENST00000330295 S100A2P29034 98 aa8.39□□□□□ -1.07
CTHRC1-201ENST00000330295 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 NCR3O14931 201 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 S100A6P06703 90 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 CTAG1AP78358 180 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 DAND5Q8N907 189 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 Q8NDZ9 215 aa8.38□□□□□ -1.07
CTHRC1-201ENST00000330295 PRYO14603 147 aa8.37□□□□□ -1.07
CTHRC1-201ENST00000330295 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 ZNF815PA8K554 130 aa8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 ANAPC11Q9NYG5 84 aa8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 CBY1Q9Y3M2 126 aa8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 FCGBPQ9Y6R7 5405 aaPredicted RBP8.36□□□□□ -1.07
CTHRC1-201ENST00000330295 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 TIMM17BO60830 172 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 NDUFC2O95298 119 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 PRLHP81277 87 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
CTHRC1-201ENST00000330295 DDTP30046 118 aa8.34□□□□□ -1.07
CTHRC1-201ENST00000330295 SNRPEP62304 92 aaKnown RBP8.34□□□□□ -1.07
CTHRC1-201ENST00000330295 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
CTHRC1-201ENST00000330295 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
CTHRC1-201ENST00000330295 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
CTHRC1-201ENST00000330295 USH2AO75445 5202 aa8.34□□□□□ -1.08
CTHRC1-201ENST00000330295 TRBV10-3A0A0K0K1G6 114 aa8.33□□□□□ -1.08
CTHRC1-201ENST00000330295 SCGB1D4Q6XE38 83 aa8.33□□□□□ -1.08
CTHRC1-201ENST00000330295 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
CTHRC1-201ENST00000330295 M0R2T5 61 aa8.32□□□□□ -1.08
CTHRC1-201ENST00000330295 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
CTHRC1-201ENST00000330295 ZNF706Q9Y5V0 76 aaPredicted RBP8.32□□□□□ -1.08
CTHRC1-201ENST00000330295 HSBP1L1C9JCN9 74 aa8.31□□□□□ -1.08
CTHRC1-201ENST00000330295 NPC2P61916 151 aa8.31□□□□□ -1.08
CTHRC1-201ENST00000330295 ADAMTSL4-AS1Q5T5F5 129 aa8.31□□□□□ -1.08
CTHRC1-201ENST00000330295 HIST3H2BBQ8N257 126 aa8.31□□□□□ -1.08
CTHRC1-201ENST00000330295 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
CTHRC1-201ENST00000330295 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
CTHRC1-201ENST00000330295 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 SPRR1AP35321 89 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 ATOH7Q8N100 152 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 KRTAP4-9Q9BYQ8 210 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
CTHRC1-201ENST00000330295 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
CTHRC1-201ENST00000330295 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
CTHRC1-201ENST00000330295 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
CTHRC1-201ENST00000330295 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
CTHRC1-201ENST00000330295 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
CTHRC1-201ENST00000330295 LITAFQ99732 161 aa8.27□□□□□ -1.09
CTHRC1-201ENST00000330295 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
CTHRC1-201ENST00000330295 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
CTHRC1-201ENST00000330295 Q6ZVH6 145 aa8.26□□□□□ -1.09
CTHRC1-201ENST00000330295 KRTAP4-2Q9BYR5 136 aa8.26□□□□□ -1.09
CTHRC1-201ENST00000330295 TTTY13Q9BZ97 58 aa8.26□□□□□ -1.09
CTHRC1-201ENST00000330295 IFITM1P13164 125 aa8.25□□□□□ -1.09
CTHRC1-201ENST00000330295 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
CTHRC1-201ENST00000330295 B5MCH6 92 aa8.24□□□□□ -1.09
CTHRC1-201ENST00000330295 KRTAP4-16G5E9R7 235 aaPredicted RBP8.24□□□□□ -1.09
CTHRC1-201ENST00000330295 SPANXDQ9BXN6 97 aa8.24□□□□□ -1.09
CTHRC1-201ENST00000330295 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
CTHRC1-201ENST00000330295 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
CTHRC1-201ENST00000330295 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
CTHRC1-201ENST00000330295 Q6ZRX8 168 aa8.22□□□□□ -1.09
CTHRC1-201ENST00000330295 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.1
CTHRC1-201ENST00000330295 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
CTHRC1-201ENST00000330295 C5orf52A6NGY3 159 aa8.19□□□□□ -1.1
CTHRC1-201ENST00000330295 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
CTHRC1-201ENST00000330295 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
CTHRC1-201ENST00000330295 SPAG11AQ6PDA7 123 aa8.18□□□□□ -1.1
CTHRC1-201ENST00000330295 A6NDN8 102 aa8.17□□□□□ -1.1
CTHRC1-201ENST00000330295 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
CTHRC1-201ENST00000330295 DHRS4-AS1Q9P1J3 65 aa8.17□□□□□ -1.1
CTHRC1-201ENST00000330295 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
CTHRC1-201ENST00000330295 TRAV13-2A0A0B4J235 113 aa8.15□□□□□ -1.1
CTHRC1-201ENST00000330295 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
CTHRC1-201ENST00000330295 Q9BRP9 147 aa8.15□□□□□ -1.1
CTHRC1-201ENST00000330295 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
CTHRC1-201ENST00000330295 COX7BP24311 80 aa8.14□□□□□ -1.11
CTHRC1-201ENST00000330295 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
CTHRC1-201ENST00000330295 IGLV8-61A0A075B6I0 122 aa8.13□□□□□ -1.11
CTHRC1-201ENST00000330295 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
CTHRC1-201ENST00000330295 SLC25A34Q6PIV7 304 aa8.13□□□□□ -1.11
CTHRC1-201ENST00000330295 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
CTHRC1-201ENST00000330295 IGLV9-49A0A0B4J1Y8 123 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms