RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RMI2Q96E14 147 aa9.46□□□□□ -0.9
TPM3-206ENST00000330188 COL6A5A8TX70 2615 aa9.45□□□□□ -0.9
TPM3-206ENST00000330188 UQCRQO14949 82 aa9.44□□□□□ -0.9
TPM3-206ENST00000330188 COX7CP15954 63 aa9.43□□□□□ -0.9
TPM3-206ENST00000330188 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
TPM3-206ENST00000330188 IGLV5-37A0A075B6J1 123 aa9.42□□□□□ -0.9
TPM3-206ENST00000330188 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
TPM3-206ENST00000330188 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
TPM3-206ENST00000330188 C9orf153Q5TBE3 101 aa9.41□□□□□ -0.9
TPM3-206ENST00000330188 Q6ZVQ6 151 aa9.41□□□□□ -0.9
TPM3-206ENST00000330188 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
TPM3-206ENST00000330188 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.91
TPM3-206ENST00000330188 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.91
TPM3-206ENST00000330188 RPL37AP8A6NKH3 93 aa9.39□□□□□ -0.91
TPM3-206ENST00000330188 IGLV1-50A0A075B6I6 118 aa9.38□□□□□ -0.91
TPM3-206ENST00000330188 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
TPM3-206ENST00000330188 PRYO14603 147 aa9.38□□□□□ -0.91
TPM3-206ENST00000330188 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
TPM3-206ENST00000330188 SPRR1AP35321 89 aa9.37□□□□□ -0.91
TPM3-206ENST00000330188 LOC107984640A0A0U1RRK4 108 aa9.37□□□□□ -0.91
TPM3-206ENST00000330188 Q6ZRX8 168 aa9.37□□□□□ -0.91
TPM3-206ENST00000330188 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
TPM3-206ENST00000330188 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
TPM3-206ENST00000330188 HAMPP81172 84 aa9.35□□□□□ -0.91
TPM3-206ENST00000330188 Q8N377 158 aa9.35□□□□□ -0.91
TPM3-206ENST00000330188 CRYGAP11844 174 aa9.35□□□□□ -0.91
TPM3-206ENST00000330188 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
TPM3-206ENST00000330188 Q9BRP9 147 aa9.35□□□□□ -0.91
TPM3-206ENST00000330188 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
TPM3-206ENST00000330188 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.91
TPM3-206ENST00000330188 CXCL6P80162 114 aa9.34□□□□□ -0.91
TPM3-206ENST00000330188 MRPL55Q7Z7F7 128 aaKnown RBP9.34□□□□□ -0.91
TPM3-206ENST00000330188 DEFB105AQ8NG35 78 aa9.34□□□□□ -0.91
TPM3-206ENST00000330188 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
TPM3-206ENST00000330188 LYSTQ99698 3801 aa9.32□□□□□ -0.92
TPM3-206ENST00000330188 DNAH10Q8IVF4 4471 aa9.32□□□□□ -0.92
TPM3-206ENST00000330188 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
TPM3-206ENST00000330188 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
TPM3-206ENST00000330188 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
TPM3-206ENST00000330188 UBE2DNLQ8IWF7 75 aa9.29□□□□□ -0.92
TPM3-206ENST00000330188 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
TPM3-206ENST00000330188 CNBPP62633 177 aaKnown RBP9.28□□□□□ -0.92
TPM3-206ENST00000330188 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
TPM3-206ENST00000330188 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
TPM3-206ENST00000330188 DYNC2H1Q8NCM8 4307 aaKnown RBP9.28□□□□□ -0.92
TPM3-206ENST00000330188 A0A096LNI7 61 aa9.28□□□□□ -0.92
TPM3-206ENST00000330188 SCXQ7RTU7 201 aa9.28□□□□□ -0.92
TPM3-206ENST00000330188 PSCAO43653 123 aa9.27□□□□□ -0.93
TPM3-206ENST00000330188 ERC2-IT1O76042 136 aa9.27□□□□□ -0.93
TPM3-206ENST00000330188 MDFIQ99750 246 aa9.27□□□□□ -0.93
TPM3-206ENST00000330188 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
TPM3-206ENST00000330188 TNP2Q05952 138 aa9.26□□□□□ -0.93
TPM3-206ENST00000330188 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
TPM3-206ENST00000330188 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
TPM3-206ENST00000330188 BCE1O60756 84 aa9.25□□□□□ -0.93
TPM3-206ENST00000330188 IGKV2-24A0A0C4DH68 120 aa9.24□□□□□ -0.93
TPM3-206ENST00000330188 UBE2BP63146 152 aa9.24□□□□□ -0.93
TPM3-206ENST00000330188 STAB2Q8WWQ8 2551 aa9.24□□□□□ -0.93
TPM3-206ENST00000330188 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
TPM3-206ENST00000330188 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
TPM3-206ENST00000330188 NREPQ16612 68 aa9.22□□□□□ -0.93
TPM3-206ENST00000330188 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
TPM3-206ENST00000330188 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
TPM3-206ENST00000330188 A0A1W2PNM2 257 aa9.21□□□□□ -0.94
TPM3-206ENST00000330188 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
TPM3-206ENST00000330188 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
TPM3-206ENST00000330188 DNAH7Q8WXX0 4024 aa9.2□□□□□ -0.94
TPM3-206ENST00000330188 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
TPM3-206ENST00000330188 PLECQ15149 4684 aaKnown RBP9.2□□□□□ -0.94
TPM3-206ENST00000330188 CSMD3Q7Z407 3707 aa9.19□□□□□ -0.94
TPM3-206ENST00000330188 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
TPM3-206ENST00000330188 A0A1B0GW54 56 aa9.19□□□□□ -0.94
TPM3-206ENST00000330188 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
TPM3-206ENST00000330188 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
TPM3-206ENST00000330188 Q8N9L7 120 aa9.17□□□□□ -0.94
TPM3-206ENST00000330188 Q8NBF4 154 aa9.17□□□□□ -0.94
TPM3-206ENST00000330188 LRCOL1A6NCL2 159 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 BPY2O14599 106 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 TMEM258P61165 79 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 PRLHP81277 87 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 SPRR4Q96PI1 79 aa9.16□□□□□ -0.94
TPM3-206ENST00000330188 NUPR2A6NF83 97 aa9.15□□□□□ -0.94
TPM3-206ENST00000330188 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
TPM3-206ENST00000330188 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
TPM3-206ENST00000330188 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
TPM3-206ENST00000330188 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
TPM3-206ENST00000330188 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
TPM3-206ENST00000330188 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
TPM3-206ENST00000330188 F8WEM9 126 aa9.11□□□□□ -0.95
TPM3-206ENST00000330188 J3QL48 77 aa9.1□□□□□ -0.95
TPM3-206ENST00000330188 STARD9Q9P2P6 4700 aa9.08□□□□□ -0.96
TPM3-206ENST00000330188 KLKP1Q107X0 134 aa9.08□□□□□ -0.96
TPM3-206ENST00000330188 IGFL1Q6UW32 110 aa9.08□□□□□ -0.96
TPM3-206ENST00000330188 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
TPM3-206ENST00000330188 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
TPM3-206ENST00000330188 A0A0G2JQZ4 141 aa9.07□□□□□ -0.96
TPM3-206ENST00000330188 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms