RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 hDV103S1A0JD37 113 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 RBAKDNA6NC62 111 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 A6NIN4 97 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 MT-ND6P03923 174 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 MT1FP04733 61 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 FABP1P07148 127 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 DYNLT3P51808 116 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 ARFGEF3Q5TH69 2177 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TMEM14EPQ6UXP3 125 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 MORN4Q8NDC4 146 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 EFCAB11Q9BUY7 163 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 KCNQ1DNQ9H478 68 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 PCTPQ9UKL6 214 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TPRKBQ9Y3C4 175 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 V9GYQ6 96 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TRAV36DV7A0A075B6V5 113 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TRAV23DV6A0A075B6W5 121 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TRBV30A0A0K0K1B3 111 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 RIIAD1A6NNX1 92 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 UQCRQO14949 82 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 CCL16O15467 120 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 SFT2D2O95562 160 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 RPS3P23396 243 aaKnown RBP eCLIP0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 COX17Q14061 63 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM74A4Q5TZK3 123 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 BAGE2Q86Y30 109 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00052Q96N35 136 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 LENEPQ9Y5L5 61 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 TRBV7-4A0A0J9YYF1 115 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 IGIPA6NJ69 53 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 ATP6V1G2-DDX39BF2Z307 99 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 SYS1-DBNDD2H3BUS1 97 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 TAX1BP3O14907 124 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 LYZL6O75951 148 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 MT2AP02795 61 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00032P0C843 101 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 DYNLT1P63172 113 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 PMCHL1Q16048 86 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 SPINK13Q1W4C9 94 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 SMIM21Q3B7S5 101 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM24BQ8N5W8 94 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 OTOSQ8NHW6 89 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 DIRC1Q969H9 104 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 PFDN5Q99471 154 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 PRNDQ9UKY0 176 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 MED31Q9Y3C7 131 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM236DA0A1B0GTK5 79 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 SMIM27A0A1W2PRY6 76 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 K7EP34 96 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 RER1O15258 196 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 SLC25A5P05141 298 aaKnown RBP0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM236CP0DP71 79 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 MAXP61244 160 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 RRAS2P62070 204 aaPredicted RBP0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 TMEM128Q5BJH2 165 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM216BQ8N7L0 139 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 CDC42SE2Q9NRR3 84 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 C3orf85A0A1B0GTC6 90 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 A0A1B0GV72 72 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 HIGD1CA8MV81 97 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 F2Z2F3 143 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 J3KT08 172 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 PPYP01298 95 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 TRACP01848 142 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 RPL35P42766 123 aaKnown RBP0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 HBBP68871 147 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 CASC2Q6XLA1 102 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00269Q8N2A0 174 aa0.31□□□□□ -2.36
CCDC144A-201ENST00000328495 GNG14A0A1W2PPG7 69 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 CORTO00230 105 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 DPM2O94777 84 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 POLR2JP52435 117 aaKnown RBP0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 OCIAD2Q56VL3 154 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 Q6ZQY7 126 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 CYP2G1PQ6ZSU1 146 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 CST11Q9H112 138 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 ATG5Q9H1Y0 275 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 MED11Q9P086 117 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 AP4S1Q9Y587 144 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 TRAV13-2A0A0B4J235 113 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 A0A1W2PRE2 83 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 MT1EP04732 61 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 SPINK7P58062 85 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 DEFA1P59665 94 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 ROMO1P60602 79 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 VMA21Q3ZAQ7 101 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 WFDC10AQ9H1F0 79 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 ABRACLQ9P1F3 81 aa0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 GOLGA4Q13439 2230 aaKnown RBP0.3□□□□□ -2.36
CCDC144A-201ENST00000328495 TRBV25-1A0A075B6N4 114 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 KANTRA0A1W2PQU2 76 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 TMEM256-PLSCR3K7ERE1 68 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 CRIP1P50238 77 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SPANXN1Q5VSR9 72 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 UNQ5815/PRO19632Q6UWF5 114 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 LSM10Q969L4 123 aaKnown RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 ARL11Q969Q4 196 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 DPH3Q96FX2 82 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 HOPXQ9BPY8 73 aaPredicted RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms