RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRAV22A0A0B4J277 110 aa7.45□□□□□ -1.22
COL4A5-201ENST00000328300 F8P00451 2351 aa7.45□□□□□ -1.22
COL4A5-201ENST00000328300 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
COL4A5-201ENST00000328300 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
COL4A5-201ENST00000328300 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
COL4A5-201ENST00000328300 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
COL4A5-201ENST00000328300 LINC00304Q8N9R0 145 aa7.4□□□□□ -1.22
COL4A5-201ENST00000328300 ACANP16112 2415 aa7.4□□□□□ -1.23
COL4A5-201ENST00000328300 Q8N377 158 aa7.38□□□□□ -1.23
COL4A5-201ENST00000328300 SETD2Q9BYW2 2564 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-201ENST00000328300 A8MUN3 132 aa7.38□□□□□ -1.23
COL4A5-201ENST00000328300 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
COL4A5-201ENST00000328300 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
COL4A5-201ENST00000328300 CYP4F30PQ9H0H9 118 aa7.37□□□□□ -1.23
COL4A5-201ENST00000328300 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
COL4A5-201ENST00000328300 CD164Q04900 197 aa7.36□□□□□ -1.23
COL4A5-201ENST00000328300 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-201ENST00000328300 A0A1B0GVX0 72 aa7.35□□□□□ -1.23
COL4A5-201ENST00000328300 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
COL4A5-201ENST00000328300 J3QL48 77 aa7.35□□□□□ -1.23
COL4A5-201ENST00000328300 Q96NJ1 140 aa7.35□□□□□ -1.23
COL4A5-201ENST00000328300 CENPFP49454 3210 aa7.35□□□□□ -1.23
COL4A5-201ENST00000328300 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
COL4A5-201ENST00000328300 COA5Q86WW8 74 aa7.34□□□□□ -1.23
COL4A5-201ENST00000328300 K7EQZ3 153 aa7.34□□□□□ -1.23
COL4A5-201ENST00000328300 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
COL4A5-201ENST00000328300 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
COL4A5-201ENST00000328300 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
COL4A5-201ENST00000328300 IGLV5-48A0A075B6I7 105 aa7.33□□□□□ -1.24
COL4A5-201ENST00000328300 CASC10Q5T4H9 136 aa7.31□□□□□ -1.24
COL4A5-201ENST00000328300 OBSCN-AS1Q96MR7 158 aa7.3□□□□□ -1.24
COL4A5-201ENST00000328300 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
COL4A5-201ENST00000328300 CR1P17927 2039 aa7.29□□□□□ -1.24
COL4A5-201ENST00000328300 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
COL4A5-201ENST00000328300 H7BZZ5 65 aa7.29□□□□□ -1.24
COL4A5-201ENST00000328300 FAM104AQ969W3 186 aa7.28□□□□□ -1.24
COL4A5-201ENST00000328300 UQCR11O14957 56 aa7.27□□□□□ -1.25
COL4A5-201ENST00000328300 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
COL4A5-201ENST00000328300 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
COL4A5-201ENST00000328300 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
COL4A5-201ENST00000328300 CHD9Q3L8U1 2897 aa7.23□□□□□ -1.25
COL4A5-201ENST00000328300 TNP2Q05952 138 aa7.22□□□□□ -1.25
COL4A5-201ENST00000328300 DSCR10P59022 87 aa7.22□□□□□ -1.25
COL4A5-201ENST00000328300 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
COL4A5-201ENST00000328300 SRCAPQ6ZRS2 3230 aa7.21□□□□□ -1.25
COL4A5-201ENST00000328300 SPRR1AP35321 89 aa7.21□□□□□ -1.26
COL4A5-201ENST00000328300 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
COL4A5-201ENST00000328300 FLNAP21333 2647 aaKnown RBP7.18□□□□□ -1.26
COL4A5-201ENST00000328300 LCA10Q71F78 164 aa7.18□□□□□ -1.26
COL4A5-201ENST00000328300 SPRR1BP22528 89 aa7.18□□□□□ -1.26
COL4A5-201ENST00000328300 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
COL4A5-201ENST00000328300 HELZ2Q9BYK8 2649 aaKnown RBP7.17□□□□□ -1.26
COL4A5-201ENST00000328300 SMR3BP02814 79 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-201ENST00000328300 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.27
COL4A5-201ENST00000328300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.27
COL4A5-201ENST00000328300 CHD7Q9P2D1 2997 aa7.14□□□□□ -1.27
COL4A5-201ENST00000328300 TRANK1O15050 2925 aa7.13□□□□□ -1.27
COL4A5-201ENST00000328300 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
COL4A5-201ENST00000328300 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
COL4A5-201ENST00000328300 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
COL4A5-201ENST00000328300 ZNF292O60281 2723 aa7.12□□□□□ -1.27
COL4A5-201ENST00000328300 KRTAP26-1Q6PEX3 210 aa7.12□□□□□ -1.27
COL4A5-201ENST00000328300 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
COL4A5-201ENST00000328300 CDC42SE1Q9NRR8 79 aa7.1□□□□□ -1.27
COL4A5-201ENST00000328300 LCE6AA0A183 80 aa7.1□□□□□ -1.27
COL4A5-201ENST00000328300 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
COL4A5-201ENST00000328300 COX6B2Q6YFQ2 88 aa7.09□□□□□ -1.27
COL4A5-201ENST00000328300 H3BS24 57 aa7.09□□□□□ -1.27
COL4A5-201ENST00000328300 KRTAP21-3Q3LHN1 58 aa7.09□□□□□ -1.27
COL4A5-201ENST00000328300 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
COL4A5-201ENST00000328300 USP24Q9UPU5 2620 aa7.06□□□□□ -1.28
COL4A5-201ENST00000328300 Q1T7F1 81 aa7.06□□□□□ -1.28
COL4A5-201ENST00000328300 GOLGB1Q14789 3259 aaKnown RBP7.06□□□□□ -1.28
COL4A5-201ENST00000328300 DNAH12Q6ZR08 3092 aa7.05□□□□□ -1.28
COL4A5-201ENST00000328300 OCR1Q9BZK8 76 aa7.04□□□□□ -1.28
COL4A5-201ENST00000328300 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.29
COL4A5-201ENST00000328300 IGLV7-46A0A075B6I9 117 aa7.01□□□□□ -1.29
COL4A5-201ENST00000328300 Q6ZR54 194 aa7.01□□□□□ -1.29
COL4A5-201ENST00000328300 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
COL4A5-201ENST00000328300 LINC00483Q53H64 154 aa7□□□□□ -1.29
COL4A5-201ENST00000328300 HTTP42858 3142 aa6.99□□□□□ -1.29
COL4A5-201ENST00000328300 Q8NDZ9 215 aa6.98□□□□□ -1.29
COL4A5-201ENST00000328300 Q6ZSA8 131 aa6.97□□□□□ -1.29
COL4A5-201ENST00000328300 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
COL4A5-201ENST00000328300 ATRQ13535 2644 aa6.96□□□□□ -1.3
COL4A5-201ENST00000328300 Q5XG85 94 aa6.96□□□□□ -1.3
COL4A5-201ENST00000328300 CFAP46Q8IYW2 2715 aa6.96□□□□□ -1.3
COL4A5-201ENST00000328300 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
COL4A5-201ENST00000328300 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
COL4A5-201ENST00000328300 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
COL4A5-201ENST00000328300 Q75L30 129 aa6.94□□□□□ -1.3
COL4A5-201ENST00000328300 Q8N1X5 172 aa6.93□□□□□ -1.3
COL4A5-201ENST00000328300 A0A0D9SG42 100 aa6.92□□□□□ -1.3
COL4A5-201ENST00000328300 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-201ENST00000328300 PRRC2CQ9Y520 2896 aaKnown RBP6.91□□□□□ -1.3
COL4A5-201ENST00000328300 MAST4O15021 2626 aa6.91□□□□□ -1.3
COL4A5-201ENST00000328300 KRTAP4-16G5E9R7 235 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-201ENST00000328300 KRTAP10-1P60331 282 aa6.9□□□□□ -1.3
COL4A5-201ENST00000328300 UNC79Q9P2D8 2635 aa6.89□□□□□ -1.31
COL4A5-201ENST00000328300 CYSTM1Q9H1C7 97 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 361.4 ms