RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
SMAD3-201ENST00000327367 ZNF575Q86XF7 245 aa10.71□□□□□ -0.7
SMAD3-201ENST00000327367 WDR87Q6ZQQ6 2873 aa10.7□□□□□ -0.7
SMAD3-201ENST00000327367 COX6B2Q6YFQ2 88 aa10.68□□□□□ -0.7
SMAD3-201ENST00000327367 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
SMAD3-201ENST00000327367 TTC28Q96AY4 2481 aa10.67□□□□□ -0.7
SMAD3-201ENST00000327367 MYO9AB2RTY4 2548 aa10.66□□□□□ -0.7
SMAD3-201ENST00000327367 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.71
SMAD3-201ENST00000327367 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
SMAD3-201ENST00000327367 LINC00304Q8N9R0 145 aa10.63□□□□□ -0.71
SMAD3-201ENST00000327367 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-201ENST00000327367 Q75L30 129 aa10.62□□□□□ -0.71
SMAD3-201ENST00000327367 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
SMAD3-201ENST00000327367 ZNF861PO60384 105 aa10.61□□□□□ -0.71
SMAD3-201ENST00000327367 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
SMAD3-201ENST00000327367 PRR34Q9NV39 138 aa10.58□□□□□ -0.72
SMAD3-201ENST00000327367 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-201ENST00000327367 IGF2RP11717 2491 aa10.54□□□□□ -0.72
SMAD3-201ENST00000327367 KRTAP24-1Q3LI83 254 aa10.54□□□□□ -0.72
SMAD3-201ENST00000327367 A0A1B0GU33 70 aa10.52□□□□□ -0.73
SMAD3-201ENST00000327367 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-201ENST00000327367 IGLV7-46A0A075B6I9 117 aa10.51□□□□□ -0.73
SMAD3-201ENST00000327367 Q5VV11 94 aa10.51□□□□□ -0.73
SMAD3-201ENST00000327367 GIG44P09565 113 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-201ENST00000327367 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
SMAD3-201ENST00000327367 SPINK7P58062 85 aa10.5□□□□□ -0.73
SMAD3-201ENST00000327367 TLN1Q9Y490 2541 aaKnown RBP10.5□□□□□ -0.73
SMAD3-201ENST00000327367 PSORS1C2Q9UIG4 136 aa10.5□□□□□ -0.73
SMAD3-201ENST00000327367 HRES1P13985 223 aa10.49□□□□□ -0.73
SMAD3-201ENST00000327367 PLA2G2DQ9UNK4 145 aa10.49□□□□□ -0.73
SMAD3-201ENST00000327367 COL4A2P08572 1712 aa10.49□□□□□ -0.73
SMAD3-201ENST00000327367 KRTAP10-11P60412 298 aa10.48□□□□□ -0.73
SMAD3-201ENST00000327367 LRRK2Q5S007 2527 aa10.48□□□□□ -0.73
SMAD3-201ENST00000327367 TLN2Q9Y4G6 2542 aa10.48□□□□□ -0.73
SMAD3-201ENST00000327367 KLK9Q2XQG4 91 aa10.47□□□□□ -0.73
SMAD3-201ENST00000327367 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
SMAD3-201ENST00000327367 CNBPP62633 177 aaKnown RBP10.46□□□□□ -0.73
SMAD3-201ENST00000327367 OXTP01178 125 aa10.46□□□□□ -0.73
SMAD3-201ENST00000327367 ABCA12Q86UK0 2595 aa10.46□□□□□ -0.73
SMAD3-201ENST00000327367 IGLV7-43P04211 117 aa10.46□□□□□ -0.74
SMAD3-201ENST00000327367 JMJD1CQ15652 2540 aa10.45□□□□□ -0.74
SMAD3-201ENST00000327367 J3QL48 77 aa10.45□□□□□ -0.74
SMAD3-201ENST00000327367 LINC01558Q9Y6Z2 57 aa10.44□□□□□ -0.74
SMAD3-201ENST00000327367 PCSK5Q92824 1860 aa10.42□□□□□ -0.74
SMAD3-201ENST00000327367 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-201ENST00000327367 A0A096LNT2 108 aa10.42□□□□□ -0.74
SMAD3-201ENST00000327367 A0A087WTM6 91 aa10.41□□□□□ -0.74
SMAD3-201ENST00000327367 CR1P17927 2039 aa10.4□□□□□ -0.74
SMAD3-201ENST00000327367 CENPFP49454 3210 aa10.39□□□□□ -0.75
SMAD3-201ENST00000327367 CAMK2N1Q7Z7J9 78 aa10.38□□□□□ -0.75
SMAD3-201ENST00000327367 A0A0A0MQY5 61 aa10.38□□□□□ -0.75
SMAD3-201ENST00000327367 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
SMAD3-201ENST00000327367 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
SMAD3-201ENST00000327367 PKD1L2Q7Z442 2459 aa10.37□□□□□ -0.75
SMAD3-201ENST00000327367 F8P00451 2351 aa10.37□□□□□ -0.75
SMAD3-201ENST00000327367 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
SMAD3-201ENST00000327367 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
SMAD3-201ENST00000327367 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
SMAD3-201ENST00000327367 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
SMAD3-201ENST00000327367 EP400Q96L91 3159 aa10.32□□□□□ -0.76
SMAD3-201ENST00000327367 K7EIL1 84 aa10.32□□□□□ -0.76
SMAD3-201ENST00000327367 USP9XQ93008 2570 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-201ENST00000327367 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
SMAD3-201ENST00000327367 ZFYVE26Q68DK2 2539 aa10.28□□□□□ -0.76
SMAD3-201ENST00000327367 Q8NDZ9 215 aa10.26□□□□□ -0.77
SMAD3-201ENST00000327367 DMAC1Q96GE9 116 aa10.26□□□□□ -0.77
SMAD3-201ENST00000327367 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
SMAD3-201ENST00000327367 ACANP16112 2415 aa10.22□□□□□ -0.77
SMAD3-201ENST00000327367 Q5W150 140 aa10.18□□□□□ -0.78
SMAD3-201ENST00000327367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-201ENST00000327367 Q6ZSA8 131 aa10.16□□□□□ -0.78
SMAD3-201ENST00000327367 S4R3F8 94 aa10.16□□□□□ -0.78
SMAD3-201ENST00000327367 ROMO1P60602 79 aa10.13□□□□□ -0.79
SMAD3-201ENST00000327367 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
SMAD3-201ENST00000327367 USP9YO00507 2555 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-201ENST00000327367 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
SMAD3-201ENST00000327367 ANKRD17O75179 2603 aaKnown RBP10.06□□□□□ -0.8
SMAD3-201ENST00000327367 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
SMAD3-201ENST00000327367 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
SMAD3-201ENST00000327367 TNP2Q05952 138 aa10.04□□□□□ -0.8
SMAD3-201ENST00000327367 LINC00472Q9H8W2 130 aa10.03□□□□□ -0.8
SMAD3-201ENST00000327367 MTORP42345 2549 aa10.02□□□□□ -0.81
SMAD3-201ENST00000327367 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.81
SMAD3-201ENST00000327367 POLQO75417 2590 aa10.01□□□□□ -0.81
SMAD3-201ENST00000327367 M0R2T5 61 aa10□□□□□ -0.81
SMAD3-201ENST00000327367 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
SMAD3-201ENST00000327367 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
SMAD3-201ENST00000327367 R4GN34 69 aa9.98□□□□□ -0.81
SMAD3-201ENST00000327367 UTRNP46939 3433 aa9.98□□□□□ -0.81
SMAD3-201ENST00000327367 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
SMAD3-201ENST00000327367 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
SMAD3-201ENST00000327367 ANKRD11Q6UB99 2663 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-201ENST00000327367 SPRR1AP35321 89 aa9.92□□□□□ -0.82
SMAD3-201ENST00000327367 A6NN06 94 aa9.88□□□□□ -0.83
SMAD3-201ENST00000327367 BPTFQ12830 3046 aa9.87□□□□□ -0.83
SMAD3-201ENST00000327367 M0QZ58 72 aa9.87□□□□□ -0.83
SMAD3-201ENST00000327367 A8MU10 97 aa9.86□□□□□ -0.83
SMAD3-201ENST00000327367 NDUFAF8A1L188 74 aa9.84□□□□□ -0.83
SMAD3-201ENST00000327367 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
SMAD3-201ENST00000327367 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms