RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 COL4A2P08572 1712 aa6.72□□□□□ -1.33
COL12A1-201ENST00000322507 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.33
COL12A1-201ENST00000322507 KIF25-AS1Q9Y6Z4 181 aa6.71□□□□□ -1.34
COL12A1-201ENST00000322507 M0R2N4 97 aa6.71□□□□□ -1.34
COL12A1-201ENST00000322507 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
COL12A1-201ENST00000322507 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
COL12A1-201ENST00000322507 CFAP46Q8IYW2 2715 aa6.68□□□□□ -1.34
COL12A1-201ENST00000322507 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
COL12A1-201ENST00000322507 HELZ2Q9BYK8 2649 aaKnown RBP6.68□□□□□ -1.34
COL12A1-201ENST00000322507 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
COL12A1-201ENST00000322507 Q6ZRX8 168 aa6.67□□□□□ -1.34
COL12A1-201ENST00000322507 ITPR3Q14573 2671 aa6.67□□□□□ -1.34
COL12A1-201ENST00000322507 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
COL12A1-201ENST00000322507 STAB1Q9NY15 2570 aa6.65□□□□□ -1.34
COL12A1-201ENST00000322507 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
COL12A1-201ENST00000322507 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
COL12A1-201ENST00000322507 KLK9Q2XQG4 91 aa6.63□□□□□ -1.35
COL12A1-201ENST00000322507 Q6ZSN1 163 aa6.63□□□□□ -1.35
COL12A1-201ENST00000322507 FAM104AQ969W3 186 aa6.63□□□□□ -1.35
COL12A1-201ENST00000322507 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
COL12A1-201ENST00000322507 UTRNP46939 3433 aa6.62□□□□□ -1.35
COL12A1-201ENST00000322507 LINC00476Q8WZB0 136 aa6.61□□□□□ -1.35
COL12A1-201ENST00000322507 Q6ZRP5 223 aa6.61□□□□□ -1.35
COL12A1-201ENST00000322507 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 DNAH12Q6ZR08 3092 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 Q5XG85 94 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 LINC00315P59091 139 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 LINC00588Q9Y4M8 146 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 A8MTW9 85 aa6.6□□□□□ -1.35
COL12A1-201ENST00000322507 LINC00167Q96N53 147 aa6.59□□□□□ -1.35
COL12A1-201ENST00000322507 K7EQZ3 153 aa6.59□□□□□ -1.35
COL12A1-201ENST00000322507 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
COL12A1-201ENST00000322507 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
COL12A1-201ENST00000322507 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
COL12A1-201ENST00000322507 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
COL12A1-201ENST00000322507 SPINK7P58062 85 aa6.54□□□□□ -1.36
COL12A1-201ENST00000322507 KMT2BQ9UMN6 2715 aaPredicted RBP6.54□□□□□ -1.36
COL12A1-201ENST00000322507 CHD6Q8TD26 2715 aa6.53□□□□□ -1.36
COL12A1-201ENST00000322507 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
COL12A1-201ENST00000322507 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
COL12A1-201ENST00000322507 NOTCH1P46531 2555 aa6.52□□□□□ -1.37
COL12A1-201ENST00000322507 A0A1W2PPR1 153 aa6.51□□□□□ -1.37
COL12A1-201ENST00000322507 A0A1B0GU33 70 aa6.51□□□□□ -1.37
COL12A1-201ENST00000322507 TYMSOSQ8TAI1 123 aa6.51□□□□□ -1.37
COL12A1-201ENST00000322507 KCNQ1DNQ9H478 68 aa6.51□□□□□ -1.37
COL12A1-201ENST00000322507 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
COL12A1-201ENST00000322507 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
COL12A1-201ENST00000322507 TEX15Q9BXT5 2789 aa6.5□□□□□ -1.37
COL12A1-201ENST00000322507 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
COL12A1-201ENST00000322507 PCNTO95613 3336 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 Q8NAQ8 132 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 KRTAP10-9P60411 292 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 Q96NJ1 140 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 SMR3AQ99954 134 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 A0A0D9SG42 100 aa6.49□□□□□ -1.37
COL12A1-201ENST00000322507 RTL8CO15255 209 aa6.48□□□□□ -1.37
COL12A1-201ENST00000322507 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
COL12A1-201ENST00000322507 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
COL12A1-201ENST00000322507 ST20-AS1Q8NBB2 130 aa6.47□□□□□ -1.37
COL12A1-201ENST00000322507 Q5VV11 94 aa6.47□□□□□ -1.37
COL12A1-201ENST00000322507 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
COL12A1-201ENST00000322507 OBSCN-AS1Q96MR7 158 aa6.45□□□□□ -1.38
COL12A1-201ENST00000322507 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
COL12A1-201ENST00000322507 LITAFQ99732 161 aa6.45□□□□□ -1.38
COL12A1-201ENST00000322507 ROMO1P60602 79 aa6.45□□□□□ -1.38
COL12A1-201ENST00000322507 TNP2Q05952 138 aa6.44□□□□□ -1.38
COL12A1-201ENST00000322507 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
COL12A1-201ENST00000322507 FP248Q71RG6 208 aaPredicted RBP6.43□□□□□ -1.38
COL12A1-201ENST00000322507 PRR34Q9NV39 138 aa6.43□□□□□ -1.38
COL12A1-201ENST00000322507 IGLV5-48A0A075B6I7 105 aa6.42□□□□□ -1.38
COL12A1-201ENST00000322507 COL6A5A8TX70 2615 aa6.4□□□□□ -1.39
COL12A1-201ENST00000322507 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.39
COL12A1-201ENST00000322507 WWC2-AS2Q96NR7 200 aa6.39□□□□□ -1.39
COL12A1-201ENST00000322507 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
COL12A1-201ENST00000322507 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
COL12A1-201ENST00000322507 C5orf42Q9H799 3197 aa6.39□□□□□ -1.39
COL12A1-201ENST00000322507 ZNF861PO60384 105 aa6.38□□□□□ -1.39
COL12A1-201ENST00000322507 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
COL12A1-201ENST00000322507 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
COL12A1-201ENST00000322507 HRES1P13985 223 aa6.36□□□□□ -1.39
COL12A1-201ENST00000322507 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
COL12A1-201ENST00000322507 ZNF292O60281 2723 aa6.36□□□□□ -1.39
COL12A1-201ENST00000322507 FAM229BQ4G0N7 80 aa6.36□□□□□ -1.39
COL12A1-201ENST00000322507 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
COL12A1-201ENST00000322507 A0A087X002 238 aa6.35□□□□□ -1.39
COL12A1-201ENST00000322507 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
COL12A1-201ENST00000322507 MAP1AP78559 2803 aaPredicted RBP6.34□□□□□ -1.39
COL12A1-201ENST00000322507 LINC00612Q8N6U2 182 aa6.34□□□□□ -1.4
COL12A1-201ENST00000322507 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
COL12A1-201ENST00000322507 ITPR2Q14571 2701 aa6.33□□□□□ -1.4
COL12A1-201ENST00000322507 CEP350Q5VT06 3117 aa6.32□□□□□ -1.4
COL12A1-201ENST00000322507 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
COL12A1-201ENST00000322507 DSCR10P59022 87 aa6.29□□□□□ -1.4
COL12A1-201ENST00000322507 Q8N377 158 aa6.29□□□□□ -1.4
COL12A1-201ENST00000322507 C19orf73Q9NVV2 129 aa6.28□□□□□ -1.4
COL12A1-201ENST00000322507 ZNF575Q86XF7 245 aa6.27□□□□□ -1.41
COL12A1-201ENST00000322507 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
COL12A1-201ENST00000322507 KRTAP24-1Q3LI83 254 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms