RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
SFXN1-201ENST00000321442 LYPD5Q6UWN5 251 aa11.23□□□□□ -0.61
SFXN1-201ENST00000321442 C1orf195Q5TG92 126 aa11.23□□□□□ -0.61
SFXN1-201ENST00000321442 PSPHP1O15172 72 aa11.22□□□□□ -0.61
SFXN1-201ENST00000321442 Q6ZQT0 140 aa11.22□□□□□ -0.61
SFXN1-201ENST00000321442 V9GYY9 64 aa11.22□□□□□ -0.61
SFXN1-201ENST00000321442 TM2D3Q9BRN9 247 aa11.21□□□□□ -0.61
SFXN1-201ENST00000321442 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.62
SFXN1-201ENST00000321442 CXCL6P80162 114 aa11.19□□□□□ -0.62
SFXN1-201ENST00000321442 SPENQ96T58 3664 aaKnown RBP11.19□□□□□ -0.62
SFXN1-201ENST00000321442 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
SFXN1-201ENST00000321442 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
SFXN1-201ENST00000321442 X6R8D5 127 aa11.18□□□□□ -0.62
SFXN1-201ENST00000321442 TENM4Q6N022 2769 aa11.17□□□□□ -0.62
SFXN1-201ENST00000321442 A0A087WSZ3 146 aa11.16□□□□□ -0.62
SFXN1-201ENST00000321442 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
SFXN1-201ENST00000321442 CSMD2Q7Z408 3487 aa11.15□□□□□ -0.63
SFXN1-201ENST00000321442 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
SFXN1-201ENST00000321442 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
SFXN1-201ENST00000321442 A6NED7 52 aa11.13□□□□□ -0.63
SFXN1-201ENST00000321442 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
SFXN1-201ENST00000321442 ESRGQ1W209 222 aa11.12□□□□□ -0.63
SFXN1-201ENST00000321442 ZFHX3Q15911 3703 aa11.12□□□□□ -0.63
SFXN1-201ENST00000321442 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-201ENST00000321442 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
SFXN1-201ENST00000321442 STAB2Q8WWQ8 2551 aa11.1□□□□□ -0.63
SFXN1-201ENST00000321442 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
SFXN1-201ENST00000321442 PRLHP81277 87 aa11.1□□□□□ -0.63
SFXN1-201ENST00000321442 PRO0628Q9UI54 55 aa11.1□□□□□ -0.63
SFXN1-201ENST00000321442 LY6G6CO95867 125 aa11.09□□□□□ -0.63
SFXN1-201ENST00000321442 C2orf48Q96LS8 159 aa11.08□□□□□ -0.64
SFXN1-201ENST00000321442 LOC110117498A0A087WWA1 95 aa11.08□□□□□ -0.64
SFXN1-201ENST00000321442 REG3GQ6UW15 175 aa11.07□□□□□ -0.64
SFXN1-201ENST00000321442 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
SFXN1-201ENST00000321442 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
SFXN1-201ENST00000321442 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
SFXN1-201ENST00000321442 PMAIP1Q13794 54 aa11.06□□□□□ -0.64
SFXN1-201ENST00000321442 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
SFXN1-201ENST00000321442 PCOTHQ58A44 107 aa11.05□□□□□ -0.64
SFXN1-201ENST00000321442 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
SFXN1-201ENST00000321442 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
SFXN1-201ENST00000321442 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
SFXN1-201ENST00000321442 LINC00474Q9P2X8 69 aa11.04□□□□□ -0.64
SFXN1-201ENST00000321442 NBPF19A0A087WUL8 3843 aa11.04□□□□□ -0.64
SFXN1-201ENST00000321442 KRTAP10-11P60412 298 aa11.04□□□□□ -0.64
SFXN1-201ENST00000321442 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
SFXN1-201ENST00000321442 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
SFXN1-201ENST00000321442 FBN1P35555 2871 aaKnown RBP11.03□□□□□ -0.64
SFXN1-201ENST00000321442 IGLV6-57P01721 117 aa11.02□□□□□ -0.65
SFXN1-201ENST00000321442 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
SFXN1-201ENST00000321442 Q9BRP9 147 aa11.02□□□□□ -0.65
SFXN1-201ENST00000321442 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
SFXN1-201ENST00000321442 BCE1O60756 84 aa11.01□□□□□ -0.65
SFXN1-201ENST00000321442 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
SFXN1-201ENST00000321442 Q8NAQ8 132 aa11.01□□□□□ -0.65
SFXN1-201ENST00000321442 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
SFXN1-201ENST00000321442 LINC01600Q96MT4 127 aa11□□□□□ -0.65
SFXN1-201ENST00000321442 H0Y9P7 68 aa10.98□□□□□ -0.65
SFXN1-201ENST00000321442 VPREB1P12018 145 aa10.98□□□□□ -0.65
SFXN1-201ENST00000321442 Q6ZRP5 223 aa10.98□□□□□ -0.65
SFXN1-201ENST00000321442 OTOGQ6ZRI0 2925 aa10.98□□□□□ -0.65
SFXN1-201ENST00000321442 H7BZZ5 65 aa10.98□□□□□ -0.65
SFXN1-201ENST00000321442 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
SFXN1-201ENST00000321442 Q8NBF4 154 aa10.94□□□□□ -0.66
SFXN1-201ENST00000321442 CYSTM1Q9H1C7 97 aa10.94□□□□□ -0.66
SFXN1-201ENST00000321442 MDFIQ99750 246 aa10.94□□□□□ -0.66
SFXN1-201ENST00000321442 TENM1Q9UKZ4 2725 aa10.94□□□□□ -0.66
SFXN1-201ENST00000321442 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
SFXN1-201ENST00000321442 KLKP1Q107X0 134 aa10.93□□□□□ -0.66
SFXN1-201ENST00000321442 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
SFXN1-201ENST00000321442 Q6ZRX8 168 aa10.92□□□□□ -0.66
SFXN1-201ENST00000321442 FAM168BA1KXE4 195 aa10.9□□□□□ -0.66
SFXN1-201ENST00000321442 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
SFXN1-201ENST00000321442 C1orf64Q8NEQ6 169 aa10.9□□□□□ -0.66
SFXN1-201ENST00000321442 LINC00476Q8WZB0 136 aa10.9□□□□□ -0.66
SFXN1-201ENST00000321442 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
SFXN1-201ENST00000321442 K7EIL1 84 aa10.89□□□□□ -0.67
SFXN1-201ENST00000321442 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
SFXN1-201ENST00000321442 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
SFXN1-201ENST00000321442 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
SFXN1-201ENST00000321442 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
SFXN1-201ENST00000321442 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
SFXN1-201ENST00000321442 TRBV7-4A0A0J9YYF1 115 aa10.87□□□□□ -0.67
SFXN1-201ENST00000321442 OBSCN-AS1Q96MR7 158 aa10.87□□□□□ -0.67
SFXN1-201ENST00000321442 K7EQZ3 153 aa10.87□□□□□ -0.67
SFXN1-201ENST00000321442 VWFP04275 2813 aa10.85□□□□□ -0.67
SFXN1-201ENST00000321442 PRR34Q9NV39 138 aa10.85□□□□□ -0.67
SFXN1-201ENST00000321442 hDV103S1A0JD37 113 aa10.84□□□□□ -0.67
SFXN1-201ENST00000321442 F8WDY8 70 aa10.84□□□□□ -0.67
SFXN1-201ENST00000321442 Q8N377 158 aa10.83□□□□□ -0.68
SFXN1-201ENST00000321442 RETNLBQ9BQ08 111 aa10.81□□□□□ -0.68
SFXN1-201ENST00000321442 LINC00588Q9Y4M8 146 aa10.81□□□□□ -0.68
SFXN1-201ENST00000321442 LINC00612Q8N6U2 182 aa10.8□□□□□ -0.68
SFXN1-201ENST00000321442 CIRBP-AS1Q8TBR5 109 aa10.8□□□□□ -0.68
SFXN1-201ENST00000321442 PKD1L1Q8TDX9 2849 aa10.79□□□□□ -0.68
SFXN1-201ENST00000321442 C15orf56Q8N910 161 aa10.79□□□□□ -0.68
SFXN1-201ENST00000321442 NUPR2A6NF83 97 aa10.78□□□□□ -0.68
SFXN1-201ENST00000321442 A8MUN3 132 aa10.78□□□□□ -0.68
SFXN1-201ENST00000321442 Q8NDZ9 215 aa10.78□□□□□ -0.68
SFXN1-201ENST00000321442 BSNQ9UPA5 3926 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms