RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
GCFC2-201ENST00000321027 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
GCFC2-201ENST00000321027 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
GCFC2-201ENST00000321027 PMAIP1Q13794 54 aa10.49□□□□□ -0.73
GCFC2-201ENST00000321027 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
GCFC2-201ENST00000321027 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
GCFC2-201ENST00000321027 CRYGAP11844 174 aa10.48□□□□□ -0.73
GCFC2-201ENST00000321027 H0Y9P7 68 aa10.47□□□□□ -0.73
GCFC2-201ENST00000321027 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.74
GCFC2-201ENST00000321027 HCG22E2RYF7 251 aa10.45□□□□□ -0.74
GCFC2-201ENST00000321027 Q8NAQ8 132 aa10.45□□□□□ -0.74
GCFC2-201ENST00000321027 SMG1Q96Q15 3661 aaKnown RBP10.45□□□□□ -0.74
GCFC2-201ENST00000321027 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
GCFC2-201ENST00000321027 LINC00167Q96N53 147 aa10.44□□□□□ -0.74
GCFC2-201ENST00000321027 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
GCFC2-201ENST00000321027 C19orf73Q9NVV2 129 aa10.44□□□□□ -0.74
GCFC2-201ENST00000321027 COL6A5A8TX70 2615 aa10.43□□□□□ -0.74
GCFC2-201ENST00000321027 CXCL6P80162 114 aa10.43□□□□□ -0.74
GCFC2-201ENST00000321027 ASH1LQ9NR48 2969 aaKnown RBP10.43□□□□□ -0.74
GCFC2-201ENST00000321027 SETXQ7Z333 2677 aaKnown RBP10.43□□□□□ -0.74
GCFC2-201ENST00000321027 F8WDY8 70 aa10.43□□□□□ -0.74
GCFC2-201ENST00000321027 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
GCFC2-201ENST00000321027 Q6ZQT0 140 aa10.43□□□□□ -0.74
GCFC2-201ENST00000321027 KRTAP10-3P60369 221 aa10.42□□□□□ -0.74
GCFC2-201ENST00000321027 LAMA5O15230 3695 aa10.42□□□□□ -0.74
GCFC2-201ENST00000321027 SMIM29Q86T20 159 aa10.42□□□□□ -0.74
GCFC2-201ENST00000321027 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
GCFC2-201ENST00000321027 SPINK1P00995 79 aa10.42□□□□□ -0.74
GCFC2-201ENST00000321027 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
GCFC2-201ENST00000321027 SPENQ96T58 3664 aaKnown RBP10.4□□□□□ -0.74
GCFC2-201ENST00000321027 C1orf64Q8NEQ6 169 aa10.37□□□□□ -0.75
GCFC2-201ENST00000321027 ELOF1P60002 83 aaKnown RBP10.36□□□□□ -0.75
GCFC2-201ENST00000321027 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
GCFC2-201ENST00000321027 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
GCFC2-201ENST00000321027 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
GCFC2-201ENST00000321027 LOC110117498A0A087WWA1 95 aa10.33□□□□□ -0.76
GCFC2-201ENST00000321027 CR1P17927 2039 aa10.33□□□□□ -0.76
GCFC2-201ENST00000321027 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
GCFC2-201ENST00000321027 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
GCFC2-201ENST00000321027 ST20-AS1Q8NBB2 130 aa10.31□□□□□ -0.76
GCFC2-201ENST00000321027 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
GCFC2-201ENST00000321027 Q6ZRP5 223 aa10.31□□□□□ -0.76
GCFC2-201ENST00000321027 H3BNG1 76 aa10.31□□□□□ -0.76
GCFC2-201ENST00000321027 NBEAL1Q6ZS30 2694 aa10.31□□□□□ -0.76
GCFC2-201ENST00000321027 Q8NBF4 154 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 VPREB1P12018 145 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 IGKV2D-30A0A075B6S6 120 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 MOBPQ13875 183 aa10.3□□□□□ -0.76
GCFC2-201ENST00000321027 LINC00476Q8WZB0 136 aa10.29□□□□□ -0.76
GCFC2-201ENST00000321027 MDFIQ99750 246 aa10.29□□□□□ -0.76
GCFC2-201ENST00000321027 Q6ZRX8 168 aa10.28□□□□□ -0.76
GCFC2-201ENST00000321027 RPS28P62857 69 aaKnown RBP10.27□□□□□ -0.77
GCFC2-201ENST00000321027 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
GCFC2-201ENST00000321027 KRTAP10-11P60412 298 aa10.27□□□□□ -0.77
GCFC2-201ENST00000321027 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
GCFC2-201ENST00000321027 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
GCFC2-201ENST00000321027 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
GCFC2-201ENST00000321027 UTP20O75691 2785 aaKnown RBP10.24□□□□□ -0.77
GCFC2-201ENST00000321027 SPACA4Q8TDM5 124 aa10.24□□□□□ -0.77
GCFC2-201ENST00000321027 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
GCFC2-201ENST00000321027 LINC00588Q9Y4M8 146 aa10.23□□□□□ -0.77
GCFC2-201ENST00000321027 FAM168BA1KXE4 195 aa10.23□□□□□ -0.77
GCFC2-201ENST00000321027 BCE1O60756 84 aa10.23□□□□□ -0.77
GCFC2-201ENST00000321027 RPL37AP61513 92 aaKnown RBP10.22□□□□□ -0.77
GCFC2-201ENST00000321027 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
GCFC2-201ENST00000321027 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.77
GCFC2-201ENST00000321027 EPM2AB3EWF7 344 aa10.21□□□□□ -0.78
GCFC2-201ENST00000321027 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
GCFC2-201ENST00000321027 PRO0628Q9UI54 55 aa10.21□□□□□ -0.78
GCFC2-201ENST00000321027 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
GCFC2-201ENST00000321027 SPAG11AQ6PDA7 123 aa10.18□□□□□ -0.78
GCFC2-201ENST00000321027 LIMD2Q9BT23 127 aa10.18□□□□□ -0.78
GCFC2-201ENST00000321027 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
GCFC2-201ENST00000321027 A0A1B0GW54 56 aa10.17□□□□□ -0.78
GCFC2-201ENST00000321027 C15orf56Q8N910 161 aa10.17□□□□□ -0.78
GCFC2-201ENST00000321027 TRAV22A0A0B4J277 110 aa10.16□□□□□ -0.78
GCFC2-201ENST00000321027 K7EIL1 84 aa10.16□□□□□ -0.78
GCFC2-201ENST00000321027 TP53AIP1Q9HCN2 124 aa10.15□□□□□ -0.78
GCFC2-201ENST00000321027 C16orf90A8MZG2 172 aa10.15□□□□□ -0.79
GCFC2-201ENST00000321027 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
GCFC2-201ENST00000321027 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
GCFC2-201ENST00000321027 DNAH10OSP0CZ25 163 aa10.13□□□□□ -0.79
GCFC2-201ENST00000321027 K7EQZ3 153 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 RELNP78509 3460 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 CELSR2Q9HCU4 2923 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 KCNQ1DNQ9H478 68 aa10.12□□□□□ -0.79
GCFC2-201ENST00000321027 HRNRQ86YZ3 2850 aaPredicted RBP10.11□□□□□ -0.79
GCFC2-201ENST00000321027 NF1P21359 2839 aa10.11□□□□□ -0.79
GCFC2-201ENST00000321027 A0A1B0GU69 56 aa10.11□□□□□ -0.79
GCFC2-201ENST00000321027 Q8N377 158 aa10.11□□□□□ -0.79
GCFC2-201ENST00000321027 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
GCFC2-201ENST00000321027 APCP25054 2843 aa10.1□□□□□ -0.79
GCFC2-201ENST00000321027 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
GCFC2-201ENST00000321027 SVEP1Q4LDE5 3571 aa10.1□□□□□ -0.79
GCFC2-201ENST00000321027 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms