RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
RPP40-201ENST00000319533 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
RPP40-201ENST00000319533 CRYGAP11844 174 aa8.34□□□□□ -1.07
RPP40-201ENST00000319533 PCP4L1A6NKN8 68 aa8.33□□□□□ -1.08
RPP40-201ENST00000319533 VPREB1P12018 145 aa8.33□□□□□ -1.08
RPP40-201ENST00000319533 DDTP30046 118 aa8.33□□□□□ -1.08
RPP40-201ENST00000319533 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
RPP40-201ENST00000319533 LITAFQ99732 161 aa8.33□□□□□ -1.08
RPP40-201ENST00000319533 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
RPP40-201ENST00000319533 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
RPP40-201ENST00000319533 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
RPP40-201ENST00000319533 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
RPP40-201ENST00000319533 UBE2AP49459 152 aa8.31□□□□□ -1.08
RPP40-201ENST00000319533 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
RPP40-201ENST00000319533 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
RPP40-201ENST00000319533 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
RPP40-201ENST00000319533 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
RPP40-201ENST00000319533 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
RPP40-201ENST00000319533 CTAG1AP78358 180 aa8.28□□□□□ -1.08
RPP40-201ENST00000319533 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
RPP40-201ENST00000319533 DAND5Q8N907 189 aa8.28□□□□□ -1.08
RPP40-201ENST00000319533 ANAPC11Q9NYG5 84 aa8.28□□□□□ -1.08
RPP40-201ENST00000319533 TIMM17BO60830 172 aa8.27□□□□□ -1.09
RPP40-201ENST00000319533 Q8NDZ9 215 aa8.27□□□□□ -1.09
RPP40-201ENST00000319533 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
RPP40-201ENST00000319533 TMEM126AQ9H061 195 aa8.27□□□□□ -1.09
RPP40-201ENST00000319533 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
RPP40-201ENST00000319533 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
RPP40-201ENST00000319533 M0R378 163 aa8.26□□□□□ -1.09
RPP40-201ENST00000319533 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
RPP40-201ENST00000319533 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
RPP40-201ENST00000319533 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
RPP40-201ENST00000319533 HSD52Q0P140 79 aa8.25□□□□□ -1.09
RPP40-201ENST00000319533 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
RPP40-201ENST00000319533 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
RPP40-201ENST00000319533 NCR3O14931 201 aa8.24□□□□□ -1.09
RPP40-201ENST00000319533 NPC2P61916 151 aa8.24□□□□□ -1.09
RPP40-201ENST00000319533 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
RPP40-201ENST00000319533 FXYD2P54710 66 aa8.23□□□□□ -1.09
RPP40-201ENST00000319533 PRLHP81277 87 aa8.23□□□□□ -1.09
RPP40-201ENST00000319533 HIST1H4GQ99525 98 aa8.23□□□□□ -1.09
RPP40-201ENST00000319533 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
RPP40-201ENST00000319533 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
RPP40-201ENST00000319533 HINT1P49773 126 aaPredicted RBP8.22□□□□□ -1.09
RPP40-201ENST00000319533 TAL2Q16559 108 aa8.22□□□□□ -1.09
RPP40-201ENST00000319533 BVES-AS1Q5T3Y7 98 aa8.22□□□□□ -1.09
RPP40-201ENST00000319533 PRYO14603 147 aa8.21□□□□□ -1.1
RPP40-201ENST00000319533 MUSTN1Q8IVN3 82 aa8.21□□□□□ -1.1
RPP40-201ENST00000319533 CEND1Q8N111 149 aa8.21□□□□□ -1.1
RPP40-201ENST00000319533 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
RPP40-201ENST00000319533 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
RPP40-201ENST00000319533 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
RPP40-201ENST00000319533 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
RPP40-201ENST00000319533 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
RPP40-201ENST00000319533 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
RPP40-201ENST00000319533 KCNQ1DNQ9H478 68 aa8.19□□□□□ -1.1
RPP40-201ENST00000319533 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
RPP40-201ENST00000319533 Q6ZVH6 145 aa8.18□□□□□ -1.1
RPP40-201ENST00000319533 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
RPP40-201ENST00000319533 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
RPP40-201ENST00000319533 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
RPP40-201ENST00000319533 IFITM1P13164 125 aa8.17□□□□□ -1.1
RPP40-201ENST00000319533 BATFQ16520 125 aa8.17□□□□□ -1.1
RPP40-201ENST00000319533 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
RPP40-201ENST00000319533 A4D1N5 150 aa8.16□□□□□ -1.1
RPP40-201ENST00000319533 M0R143 59 aa8.16□□□□□ -1.1
RPP40-201ENST00000319533 NDUFC2O95298 119 aa8.16□□□□□ -1.1
RPP40-201ENST00000319533 K7ERJ3 54 aa8.15□□□□□ -1.1
RPP40-201ENST00000319533 SPRR1AP35321 89 aa8.15□□□□□ -1.1
RPP40-201ENST00000319533 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
RPP40-201ENST00000319533 PPDPFQ9H3Y8 114 aa8.15□□□□□ -1.1
RPP40-201ENST00000319533 ZNF706Q9Y5V0 76 aaPredicted RBP8.14□□□□□ -1.11
RPP40-201ENST00000319533 CFC1BP0CG36 223 aa8.13□□□□□ -1.11
RPP40-201ENST00000319533 CFC1P0CG37 223 aa8.13□□□□□ -1.11
RPP40-201ENST00000319533 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
RPP40-201ENST00000319533 C3orf22Q8N5N4 141 aa8.13□□□□□ -1.11
RPP40-201ENST00000319533 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
RPP40-201ENST00000319533 A0A1B0GWB2 263 aa8.12□□□□□ -1.11
RPP40-201ENST00000319533 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
RPP40-201ENST00000319533 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
RPP40-201ENST00000319533 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
RPP40-201ENST00000319533 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
RPP40-201ENST00000319533 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
RPP40-201ENST00000319533 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
RPP40-201ENST00000319533 COPS9Q8WXC6 57 aa8.1□□□□□ -1.11
RPP40-201ENST00000319533 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
RPP40-201ENST00000319533 A0A0B4J2C4 111 aa8.09□□□□□ -1.11
RPP40-201ENST00000319533 B5MCH6 92 aa8.09□□□□□ -1.11
RPP40-201ENST00000319533 SMCR5Q8TEV8 140 aa8.09□□□□□ -1.11
RPP40-201ENST00000319533 KRTAP4-12Q9BQ66 201 aa8.08□□□□□ -1.12
RPP40-201ENST00000319533 A6NDN8 102 aa8.07□□□□□ -1.12
RPP40-201ENST00000319533 TAX1BP3O14907 124 aa8.07□□□□□ -1.12
RPP40-201ENST00000319533 Q6ZRX8 168 aa8.07□□□□□ -1.12
RPP40-201ENST00000319533 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
RPP40-201ENST00000319533 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
RPP40-201ENST00000319533 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
RPP40-201ENST00000319533 RAB37Q96AX2 223 aa8.06□□□□□ -1.12
RPP40-201ENST00000319533 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
RPP40-201ENST00000319533 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
RPP40-201ENST00000319533 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms