RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TRAV23DV6A0A075B6W5 121 aa17.09■□□□□ 0.33
SYNGR1-202ENST00000318801 HINT1P49773 126 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-202ENST00000318801 COPS9Q8WXC6 57 aa17.09■□□□□ 0.33
SYNGR1-202ENST00000318801 SNRPEP62304 92 aaKnown RBP17.08■□□□□ 0.32
SYNGR1-202ENST00000318801 LRP2P98164 4655 aa17.08■□□□□ 0.32
SYNGR1-202ENST00000318801 EIF4EBP3O60516 100 aaPredicted RBP17.07■□□□□ 0.32
SYNGR1-202ENST00000318801 ATOH7Q8N100 152 aa17.07■□□□□ 0.32
SYNGR1-202ENST00000318801 OR13C6PQ8NH95 151 aa17.07■□□□□ 0.32
SYNGR1-202ENST00000318801 TTTY13Q9BZ97 58 aa17.07■□□□□ 0.32
SYNGR1-202ENST00000318801 Q6ZRX8 168 aa17.05■□□□□ 0.32
SYNGR1-202ENST00000318801 LINC00518Q8N0U6 118 aa17.05■□□□□ 0.32
SYNGR1-202ENST00000318801 ZNF73O43830 326 aaPredicted RBP17.04■□□□□ 0.32
SYNGR1-202ENST00000318801 CTAG1AP78358 180 aa17.03■□□□□ 0.32
SYNGR1-202ENST00000318801 HIST3H2BBQ8N257 126 aa17.03■□□□□ 0.32
SYNGR1-202ENST00000318801 ANKRD39Q53RE8 183 aa17.02■□□□□ 0.32
SYNGR1-202ENST00000318801 HIST1H2BLQ99880 126 aa17.01■□□□□ 0.31
SYNGR1-202ENST00000318801 C3orf22Q8N5N4 141 aa17■□□□□ 0.31
SYNGR1-202ENST00000318801 SPANXDQ9BXN6 97 aa17■□□□□ 0.31
SYNGR1-202ENST00000318801 PPDPFQ9H3Y8 114 aa17■□□□□ 0.31
SYNGR1-202ENST00000318801 HSBP1L1C9JCN9 74 aa16.99■□□□□ 0.31
SYNGR1-202ENST00000318801 C4orf48Q5BLP8 95 aa16.99■□□□□ 0.31
SYNGR1-202ENST00000318801 GAGE2AQ6NT46 116 aa16.99■□□□□ 0.31
SYNGR1-202ENST00000318801 SPAG11AQ6PDA7 123 aa16.99■□□□□ 0.31
SYNGR1-202ENST00000318801 Q6ZVH6 145 aa16.99■□□□□ 0.31
SYNGR1-202ENST00000318801 IFITM1P13164 125 aa16.97■□□□□ 0.31
SYNGR1-202ENST00000318801 Q9BRP9 147 aa16.96■□□□□ 0.31
SYNGR1-202ENST00000318801 LINC00483Q53H64 154 aa16.94■□□□□ 0.3
SYNGR1-202ENST00000318801 ERC2-IT1O76042 136 aa16.93■□□□□ 0.3
SYNGR1-202ENST00000318801 PCP2Q8IVA1 136 aa16.93■□□□□ 0.3
SYNGR1-202ENST00000318801 C5orf52A6NGY3 159 aa16.89■□□□□ 0.3
SYNGR1-202ENST00000318801 DHRS4-AS1Q9P1J3 65 aa16.88■□□□□ 0.29
SYNGR1-202ENST00000318801 Q8NBF4 154 aa16.86■□□□□ 0.29
SYNGR1-202ENST00000318801 MUSTN1Q8IVN3 82 aa16.85■□□□□ 0.29
SYNGR1-202ENST00000318801 IGLV9-49A0A0B4J1Y8 123 aa16.84■□□□□ 0.29
SYNGR1-202ENST00000318801 A6NDN8 102 aa16.84■□□□□ 0.29
SYNGR1-202ENST00000318801 SCGB1D1O95968 90 aa16.83■□□□□ 0.28
SYNGR1-202ENST00000318801 SSBP3-AS1Q7Z2R9 100 aa16.83■□□□□ 0.28
SYNGR1-202ENST00000318801 COX7BP24311 80 aa16.82■□□□□ 0.28
SYNGR1-202ENST00000318801 C6orf99Q4VX62 202 aa16.81■□□□□ 0.28
SYNGR1-202ENST00000318801 RETNLBQ9BQ08 111 aa16.81■□□□□ 0.28
SYNGR1-202ENST00000318801 SPINK1P00995 79 aa16.8■□□□□ 0.28
SYNGR1-202ENST00000318801 MOBPQ13875 183 aa16.8■□□□□ 0.28
SYNGR1-202ENST00000318801 SLC25A34Q6PIV7 304 aa16.79■□□□□ 0.28
SYNGR1-202ENST00000318801 LPAP08519 4548 aa16.79■□□□□ 0.28
SYNGR1-202ENST00000318801 TRAV13-2A0A0B4J235 113 aa16.78■□□□□ 0.28
SYNGR1-202ENST00000318801 TRBV7-6A0A0J9YX20 115 aa16.77■□□□□ 0.28
SYNGR1-202ENST00000318801 ELOF1P60002 83 aaKnown RBP16.77■□□□□ 0.28
SYNGR1-202ENST00000318801 ST20-AS1Q8NBB2 130 aa16.76■□□□□ 0.27
SYNGR1-202ENST00000318801 C9orf153Q5TBE3 101 aa16.75■□□□□ 0.27
SYNGR1-202ENST00000318801 IGLV7-46A0A075B6I9 117 aa16.73■□□□□ 0.27
SYNGR1-202ENST00000318801 RNF213Q63HN8 5207 aa16.73■□□□□ 0.27
SYNGR1-202ENST00000318801 A0A1B0GWB2 263 aa16.72■□□□□ 0.27
SYNGR1-202ENST00000318801 A4D1N5 150 aa16.7■□□□□ 0.26
SYNGR1-202ENST00000318801 TAL2Q16559 108 aa16.69■□□□□ 0.26
SYNGR1-202ENST00000318801 LAMTOR3Q9UHA4 124 aa16.68■□□□□ 0.26
SYNGR1-202ENST00000318801 FP248Q71RG6 208 aaPredicted RBP16.67■□□□□ 0.26
SYNGR1-202ENST00000318801 SPRR1BP22528 89 aa16.66■□□□□ 0.26
SYNGR1-202ENST00000318801 RPS29P62273 56 aaKnown RBP16.66■□□□□ 0.26
SYNGR1-202ENST00000318801 VAMP3Q15836 100 aa16.64■□□□□ 0.26
SYNGR1-202ENST00000318801 TPRXLQ17RH7 258 aa16.64■□□□□ 0.26
SYNGR1-202ENST00000318801 CDIP1Q9H305 208 aa16.64■□□□□ 0.26
SYNGR1-202ENST00000318801 NHP2Q9NX24 153 aaKnown RBP16.64■□□□□ 0.26
SYNGR1-202ENST00000318801 DEFB105AQ8NG35 78 aa16.63■□□□□ 0.25
SYNGR1-202ENST00000318801 COX8AP10176 69 aa16.62■□□□□ 0.25
SYNGR1-202ENST00000318801 SMIM11BQ8TCY0 68 aa16.62■□□□□ 0.25
SYNGR1-202ENST00000318801 HIST1H4GQ99525 98 aa16.62■□□□□ 0.25
SYNGR1-202ENST00000318801 TEX49A0A1B0GTD5 131 aa16.61■□□□□ 0.25
SYNGR1-202ENST00000318801 SLC25A20O43772 301 aa16.59■□□□□ 0.25
SYNGR1-202ENST00000318801 DLEU1O43261 78 aa16.57■□□□□ 0.24
SYNGR1-202ENST00000318801 Q1RN00 199 aa16.52■□□□□ 0.24
SYNGR1-202ENST00000318801 Q8N377 158 aa16.52■□□□□ 0.24
SYNGR1-202ENST00000318801 VAMP8Q9BV40 100 aa16.52■□□□□ 0.24
SYNGR1-202ENST00000318801 PAM16Q9Y3D7 125 aa16.51■□□□□ 0.23
SYNGR1-202ENST00000318801 SPATA45Q537H7 98 aa16.51■□□□□ 0.23
SYNGR1-202ENST00000318801 C14orf144Q96I85 54 aa16.5■□□□□ 0.23
SYNGR1-202ENST00000318801 PRO1933Q9H354 126 aa16.49■□□□□ 0.23
SYNGR1-202ENST00000318801 IGLV5-48A0A075B6I7 105 aa16.48■□□□□ 0.23
SYNGR1-202ENST00000318801 LIMD2Q9BT23 127 aa16.48■□□□□ 0.23
SYNGR1-202ENST00000318801 C12orf57Q99622 126 aa16.44■□□□□ 0.22
SYNGR1-202ENST00000318801 HIGD1BQ9P298 99 aa16.44■□□□□ 0.22
SYNGR1-202ENST00000318801 HRCT1Q6UXD1 115 aa16.43■□□□□ 0.22
SYNGR1-202ENST00000318801 LINC00575Q6W349 94 aa16.43■□□□□ 0.22
SYNGR1-202ENST00000318801 BVES-AS1Q5T3Y7 98 aa16.42■□□□□ 0.22
SYNGR1-202ENST00000318801 hADV29S1A0JD25 119 aa16.41■□□□□ 0.22
SYNGR1-202ENST00000318801 CD164Q04900 197 aa16.41■□□□□ 0.22
SYNGR1-202ENST00000318801 LINC01547P58512 204 aaPredicted RBP16.4■□□□□ 0.22
SYNGR1-202ENST00000318801 SMIM29Q86T20 159 aa16.39■□□□□ 0.21
SYNGR1-202ENST00000318801 RAB37Q96AX2 223 aa16.39■□□□□ 0.21
SYNGR1-202ENST00000318801 H7C2G1 150 aa16.38■□□□□ 0.21
SYNGR1-202ENST00000318801 KRTAP13-3Q3SY46 172 aa16.38■□□□□ 0.21
SYNGR1-202ENST00000318801 F8WEM9 126 aa16.38■□□□□ 0.21
SYNGR1-202ENST00000318801 A0A0U1RQV1 116 aa16.37■□□□□ 0.21
SYNGR1-202ENST00000318801 SNCGO76070 127 aa16.36■□□□□ 0.21
SYNGR1-202ENST00000318801 CFC1BP0CG36 223 aa16.33■□□□□ 0.2
SYNGR1-202ENST00000318801 CFC1P0CG37 223 aa16.33■□□□□ 0.2
SYNGR1-202ENST00000318801 Q6ZQY7 126 aa16.33■□□□□ 0.2
SYNGR1-202ENST00000318801 TMEM238LA0A1B0GVL6 79 aa16.31■□□□□ 0.2
SYNGR1-202ENST00000318801 A6NJY4 79 aa16.31■□□□□ 0.2
SYNGR1-202ENST00000318801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.29■□□□□ 0.2
SYNGR1-202ENST00000318801 A0A0B4J2C4 111 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms