RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
TPM1-203ENST00000317516 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
TPM1-203ENST00000317516 SSBP3-AS1Q7Z2R9 100 aa10.14□□□□□ -0.79
TPM1-203ENST00000317516 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
TPM1-203ENST00000317516 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
TPM1-203ENST00000317516 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
TPM1-203ENST00000317516 Q9BRP9 147 aa10.13□□□□□ -0.79
TPM1-203ENST00000317516 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
TPM1-203ENST00000317516 ZNF73O43830 326 aaPredicted RBP10.12□□□□□ -0.79
TPM1-203ENST00000317516 PET117Q6UWS5 81 aa10.12□□□□□ -0.79
TPM1-203ENST00000317516 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
TPM1-203ENST00000317516 MOBPQ13875 183 aa10.11□□□□□ -0.79
TPM1-203ENST00000317516 MUC2Q02817 5179 aa10.11□□□□□ -0.79
TPM1-203ENST00000317516 TIMM17BO60830 172 aa10.1□□□□□ -0.79
TPM1-203ENST00000317516 LINC01545Q5VT33 79 aa10.1□□□□□ -0.79
TPM1-203ENST00000317516 SPANXCQ9NY87 97 aa10.1□□□□□ -0.79
TPM1-203ENST00000317516 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
TPM1-203ENST00000317516 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
TPM1-203ENST00000317516 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
TPM1-203ENST00000317516 OR13C6PQ8NH95 151 aa10.08□□□□□ -0.8
TPM1-203ENST00000317516 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
TPM1-203ENST00000317516 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
TPM1-203ENST00000317516 LITAFQ99732 161 aa10.06□□□□□ -0.8
TPM1-203ENST00000317516 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
TPM1-203ENST00000317516 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
TPM1-203ENST00000317516 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
TPM1-203ENST00000317516 SLC25A20O43772 301 aa10.03□□□□□ -0.8
TPM1-203ENST00000317516 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
TPM1-203ENST00000317516 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
TPM1-203ENST00000317516 KRTDAPP60985 99 aa10.02□□□□□ -0.81
TPM1-203ENST00000317516 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
TPM1-203ENST00000317516 C20orf202A1L168 122 aa10.01□□□□□ -0.81
TPM1-203ENST00000317516 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
TPM1-203ENST00000317516 COA6Q5JTJ3 125 aaKnown RBP10.01□□□□□ -0.81
TPM1-203ENST00000317516 ST20-AS1Q8NBB2 130 aa10.01□□□□□ -0.81
TPM1-203ENST00000317516 SCGB1D4Q6XE38 83 aa10□□□□□ -0.81
TPM1-203ENST00000317516 Q8N377 158 aa10□□□□□ -0.81
TPM1-203ENST00000317516 COPS9Q8WXC6 57 aa10□□□□□ -0.81
TPM1-203ENST00000317516 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
TPM1-203ENST00000317516 AKR1D1P51857 326 aa9.97□□□□□ -0.81
TPM1-203ENST00000317516 SPRR1BP22528 89 aa9.96□□□□□ -0.82
TPM1-203ENST00000317516 COX7BP24311 80 aa9.96□□□□□ -0.82
TPM1-203ENST00000317516 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
TPM1-203ENST00000317516 IFITM1P13164 125 aa9.95□□□□□ -0.82
TPM1-203ENST00000317516 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
TPM1-203ENST00000317516 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
TPM1-203ENST00000317516 Q6ZVH6 145 aa9.94□□□□□ -0.82
TPM1-203ENST00000317516 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
TPM1-203ENST00000317516 TAL2Q16559 108 aa9.93□□□□□ -0.82
TPM1-203ENST00000317516 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
TPM1-203ENST00000317516 TRBV7-6A0A0J9YX20 115 aa9.92□□□□□ -0.82
TPM1-203ENST00000317516 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
TPM1-203ENST00000317516 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
TPM1-203ENST00000317516 A6NDN8 102 aa9.9□□□□□ -0.82
TPM1-203ENST00000317516 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
TPM1-203ENST00000317516 SNRPEP62304 92 aaKnown RBP9.89□□□□□ -0.83
TPM1-203ENST00000317516 ATOH7Q8N100 152 aa9.89□□□□□ -0.83
TPM1-203ENST00000317516 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
TPM1-203ENST00000317516 TEX49A0A1B0GTD5 131 aa9.88□□□□□ -0.83
TPM1-203ENST00000317516 A0A1B0GWB2 263 aa9.88□□□□□ -0.83
TPM1-203ENST00000317516 HRCT1Q6UXD1 115 aa9.87□□□□□ -0.83
TPM1-203ENST00000317516 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
TPM1-203ENST00000317516 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
TPM1-203ENST00000317516 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
TPM1-203ENST00000317516 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
TPM1-203ENST00000317516 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
TPM1-203ENST00000317516 A4D1N5 150 aa9.85□□□□□ -0.83
TPM1-203ENST00000317516 Q1RN00 199 aa9.85□□□□□ -0.83
TPM1-203ENST00000317516 CD164Q04900 197 aa9.84□□□□□ -0.83
TPM1-203ENST00000317516 XP32Q5T750 250 aa9.84□□□□□ -0.83
TPM1-203ENST00000317516 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
TPM1-203ENST00000317516 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
TPM1-203ENST00000317516 H7C2G1 150 aa9.81□□□□□ -0.84
TPM1-203ENST00000317516 S100A2P29034 98 aa9.81□□□□□ -0.84
TPM1-203ENST00000317516 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
TPM1-203ENST00000317516 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
TPM1-203ENST00000317516 IGLV5-48A0A075B6I7 105 aa9.79□□□□□ -0.84
TPM1-203ENST00000317516 VAMP3Q15836 100 aa9.79□□□□□ -0.84
TPM1-203ENST00000317516 LINC01547P58512 204 aaPredicted RBP9.78□□□□□ -0.84
TPM1-203ENST00000317516 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
TPM1-203ENST00000317516 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
TPM1-203ENST00000317516 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
TPM1-203ENST00000317516 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
TPM1-203ENST00000317516 Q5XG85 94 aa9.75□□□□□ -0.85
TPM1-203ENST00000317516 KRTAP9-2Q9BYQ4 174 aa9.75□□□□□ -0.85
TPM1-203ENST00000317516 S100A6P06703 90 aa9.74□□□□□ -0.85
TPM1-203ENST00000317516 S100A1P23297 94 aa9.74□□□□□ -0.85
TPM1-203ENST00000317516 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
TPM1-203ENST00000317516 C9orf92A6NGG3 77 aa9.71□□□□□ -0.86
TPM1-203ENST00000317516 F8WEM9 126 aa9.71□□□□□ -0.86
TPM1-203ENST00000317516 LINC00575Q6W349 94 aa9.69□□□□□ -0.86
TPM1-203ENST00000317516 TCL1BO95988 128 aa9.68□□□□□ -0.86
TPM1-203ENST00000317516 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
TPM1-203ENST00000317516 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
TPM1-203ENST00000317516 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
TPM1-203ENST00000317516 PCOTHQ58A44 107 aa9.66□□□□□ -0.86
TPM1-203ENST00000317516 SCGB1D1O95968 90 aa9.65□□□□□ -0.86
TPM1-203ENST00000317516 Q6ZQY7 126 aa9.64□□□□□ -0.87
TPM1-203ENST00000317516 HIST1H4GQ99525 98 aa9.64□□□□□ -0.87
TPM1-203ENST00000317516 IGLV8-61A0A075B6I0 122 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms