RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
PCDHB9-201ENST00000316105 C7orf33Q8WU49 177 aa9.01□□□□□ -0.97
PCDHB9-201ENST00000316105 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
PCDHB9-201ENST00000316105 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
PCDHB9-201ENST00000316105 Q6ZVQ6 151 aa9□□□□□ -0.97
PCDHB9-201ENST00000316105 FBN2P35556 2912 aa9□□□□□ -0.97
PCDHB9-201ENST00000316105 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
PCDHB9-201ENST00000316105 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
PCDHB9-201ENST00000316105 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
PCDHB9-201ENST00000316105 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
PCDHB9-201ENST00000316105 LINC00588Q9Y4M8 146 aa8.99□□□□□ -0.97
PCDHB9-201ENST00000316105 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
PCDHB9-201ENST00000316105 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
PCDHB9-201ENST00000316105 H0Y9J4 135 aa8.97□□□□□ -0.97
PCDHB9-201ENST00000316105 PRYO14603 147 aa8.97□□□□□ -0.97
PCDHB9-201ENST00000316105 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
PCDHB9-201ENST00000316105 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
PCDHB9-201ENST00000316105 Q6ZRP5 223 aa8.97□□□□□ -0.97
PCDHB9-201ENST00000316105 VPREB1P12018 145 aa8.96□□□□□ -0.97
PCDHB9-201ENST00000316105 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.97
PCDHB9-201ENST00000316105 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.98
PCDHB9-201ENST00000316105 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
PCDHB9-201ENST00000316105 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
PCDHB9-201ENST00000316105 PSPHP1O15172 72 aa8.94□□□□□ -0.98
PCDHB9-201ENST00000316105 DNAH10OSP0CZ25 163 aa8.94□□□□□ -0.98
PCDHB9-201ENST00000316105 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
PCDHB9-201ENST00000316105 Q6ZQT0 140 aa8.94□□□□□ -0.98
PCDHB9-201ENST00000316105 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
PCDHB9-201ENST00000316105 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
PCDHB9-201ENST00000316105 PRLHP81277 87 aa8.93□□□□□ -0.98
PCDHB9-201ENST00000316105 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
PCDHB9-201ENST00000316105 WIPF1O43516 503 aa8.92□□□□□ -0.98
PCDHB9-201ENST00000316105 A6NED7 52 aa8.92□□□□□ -0.98
PCDHB9-201ENST00000316105 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
PCDHB9-201ENST00000316105 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
PCDHB9-201ENST00000316105 CSMD1Q96PZ7 3565 aa8.9□□□□□ -0.98
PCDHB9-201ENST00000316105 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.98
PCDHB9-201ENST00000316105 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.99
PCDHB9-201ENST00000316105 K7EIL1 84 aa8.89□□□□□ -0.99
PCDHB9-201ENST00000316105 Q8N9L7 120 aa8.89□□□□□ -0.99
PCDHB9-201ENST00000316105 LOC110117498A0A087WWA1 95 aa8.89□□□□□ -0.99
PCDHB9-201ENST00000316105 SERTAD4-AS1Q5TG53 156 aa8.88□□□□□ -0.99
PCDHB9-201ENST00000316105 LINC01600Q96MT4 127 aa8.88□□□□□ -0.99
PCDHB9-201ENST00000316105 CELSR1Q9NYQ6 3014 aa8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 Q6ZRX8 168 aa8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 IGLV9-49A0A0B4J1Y8 123 aa8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 CXCL6P80162 114 aa8.87□□□□□ -0.99
PCDHB9-201ENST00000316105 HIVEP1P15822 2718 aa8.86□□□□□ -0.99
PCDHB9-201ENST00000316105 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
PCDHB9-201ENST00000316105 Q9BRP9 147 aa8.86□□□□□ -0.99
PCDHB9-201ENST00000316105 A0A087WSZ3 146 aa8.85□□□□□ -0.99
PCDHB9-201ENST00000316105 IGKV4-1P06312 121 aa8.85□□□□□ -0.99
PCDHB9-201ENST00000316105 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
PCDHB9-201ENST00000316105 MDFIQ99750 246 aa8.84□□□□□ -0.99
PCDHB9-201ENST00000316105 ST20-AS1Q8NBB2 130 aa8.84□□□□□ -0.99
PCDHB9-201ENST00000316105 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
PCDHB9-201ENST00000316105 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
PCDHB9-201ENST00000316105 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
PCDHB9-201ENST00000316105 CASC10Q5T4H9 136 aa8.81□□□□□ -1
PCDHB9-201ENST00000316105 PRR15LQ9BU68 103 aa8.81□□□□□ -1
PCDHB9-201ENST00000316105 TM2D3Q9BRN9 247 aa8.8□□□□□ -1
PCDHB9-201ENST00000316105 CHTF8P0CG12 524 aa8.79□□□□□ -1
PCDHB9-201ENST00000316105 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
PCDHB9-201ENST00000316105 C16orf90A8MZG2 172 aa8.79□□□□□ -1
PCDHB9-201ENST00000316105 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
PCDHB9-201ENST00000316105 Q8NDZ9 215 aa8.78□□□□□ -1
PCDHB9-201ENST00000316105 SVEP1Q4LDE5 3571 aa8.78□□□□□ -1
PCDHB9-201ENST00000316105 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
PCDHB9-201ENST00000316105 BCE1O60756 84 aa8.78□□□□□ -1
PCDHB9-201ENST00000316105 BAHCC1Q9P281 2608 aa8.77□□□□□ -1
PCDHB9-201ENST00000316105 NIPBLQ6KC79 2804 aaeCLIP8.77□□□□□ -1
PCDHB9-201ENST00000316105 Q8NBF4 154 aa8.77□□□□□ -1.01
PCDHB9-201ENST00000316105 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
PCDHB9-201ENST00000316105 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
PCDHB9-201ENST00000316105 OBSCN-AS1Q96MR7 158 aa8.76□□□□□ -1.01
PCDHB9-201ENST00000316105 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
PCDHB9-201ENST00000316105 LINC00476Q8WZB0 136 aa8.75□□□□□ -1.01
PCDHB9-201ENST00000316105 TRBV7-4A0A0J9YYF1 115 aa8.73□□□□□ -1.01
PCDHB9-201ENST00000316105 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
PCDHB9-201ENST00000316105 SPENQ96T58 3664 aaKnown RBP8.73□□□□□ -1.01
PCDHB9-201ENST00000316105 Q8N377 158 aa8.73□□□□□ -1.01
PCDHB9-201ENST00000316105 C1orf134Q5TEV5 83 aa8.72□□□□□ -1.01
PCDHB9-201ENST00000316105 SMIM29Q86T20 159 aa8.72□□□□□ -1.01
PCDHB9-201ENST00000316105 BSNQ9UPA5 3926 aa8.72□□□□□ -1.01
PCDHB9-201ENST00000316105 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
PCDHB9-201ENST00000316105 H7BZZ5 65 aa8.71□□□□□ -1.01
PCDHB9-201ENST00000316105 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
PCDHB9-201ENST00000316105 A0A1B0GW54 56 aa8.69□□□□□ -1.02
PCDHB9-201ENST00000316105 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
PCDHB9-201ENST00000316105 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
PCDHB9-201ENST00000316105 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
PCDHB9-201ENST00000316105 Q5XG85 94 aa8.68□□□□□ -1.02
PCDHB9-201ENST00000316105 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
PCDHB9-201ENST00000316105 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
PCDHB9-201ENST00000316105 ERC2-IT1O76042 136 aa8.65□□□□□ -1.02
PCDHB9-201ENST00000316105 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
PCDHB9-201ENST00000316105 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
PCDHB9-201ENST00000316105 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms