RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
EXOSC4-201ENST00000316052 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
EXOSC4-201ENST00000316052 SPAG11AQ6PDA7 123 aa9.94□□□□□ -0.82
EXOSC4-201ENST00000316052 M0R143 59 aa9.93□□□□□ -0.82
EXOSC4-201ENST00000316052 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
EXOSC4-201ENST00000316052 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
EXOSC4-201ENST00000316052 LEPROTO15243 131 aa9.92□□□□□ -0.82
EXOSC4-201ENST00000316052 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
EXOSC4-201ENST00000316052 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
EXOSC4-201ENST00000316052 DAND5Q8N907 189 aa9.9□□□□□ -0.82
EXOSC4-201ENST00000316052 J3QQQ9 107 aa9.89□□□□□ -0.83
EXOSC4-201ENST00000316052 SPRR1AP35321 89 aa9.89□□□□□ -0.83
EXOSC4-201ENST00000316052 Q8NBF4 154 aa9.89□□□□□ -0.83
EXOSC4-201ENST00000316052 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
EXOSC4-201ENST00000316052 SNHG12Q9BXW3 62 aa9.89□□□□□ -0.83
EXOSC4-201ENST00000316052 KRTAP4-16G5E9R7 235 aaPredicted RBP9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 PRYO14603 147 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 NCR3O14931 201 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 HSD52Q0P140 79 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 TAL2Q16559 108 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 KCNQ1DNQ9H478 68 aa9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 ZNF706Q9Y5V0 76 aaPredicted RBP9.88□□□□□ -0.83
EXOSC4-201ENST00000316052 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
EXOSC4-201ENST00000316052 LINC00337Q8N6G1 96 aa9.87□□□□□ -0.83
EXOSC4-201ENST00000316052 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
EXOSC4-201ENST00000316052 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
EXOSC4-201ENST00000316052 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
EXOSC4-201ENST00000316052 MIR7-3HGQ8N6C7 128 aa9.86□□□□□ -0.83
EXOSC4-201ENST00000316052 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
EXOSC4-201ENST00000316052 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
EXOSC4-201ENST00000316052 TTTY13Q9BZ97 58 aa9.84□□□□□ -0.83
EXOSC4-201ENST00000316052 ETDCA0A1B0GVM5 59 aa9.83□□□□□ -0.84
EXOSC4-201ENST00000316052 BVES-AS1Q5T3Y7 98 aa9.83□□□□□ -0.84
EXOSC4-201ENST00000316052 HERV-K104P63124 156 aa9.82□□□□□ -0.84
EXOSC4-201ENST00000316052 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
EXOSC4-201ENST00000316052 COL5A1-AS1Q5SY13 56 aa9.82□□□□□ -0.84
EXOSC4-201ENST00000316052 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
EXOSC4-201ENST00000316052 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 SPINK1P00995 79 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 HINT1P49773 126 aaPredicted RBP9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 KRTAP4-1Q9BYQ7 146 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 NDUFA12Q9UI09 145 aa9.81□□□□□ -0.84
EXOSC4-201ENST00000316052 B5MCH6 92 aa9.8□□□□□ -0.84
EXOSC4-201ENST00000316052 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
EXOSC4-201ENST00000316052 TIMM17BO60830 172 aa9.78□□□□□ -0.84
EXOSC4-201ENST00000316052 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
EXOSC4-201ENST00000316052 A6NDN8 102 aa9.77□□□□□ -0.85
EXOSC4-201ENST00000316052 BATFQ16520 125 aa9.77□□□□□ -0.85
EXOSC4-201ENST00000316052 Q6ZVH6 145 aa9.77□□□□□ -0.85
EXOSC4-201ENST00000316052 CEND1Q8N111 149 aa9.77□□□□□ -0.85
EXOSC4-201ENST00000316052 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 MOBPQ13875 183 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 Q9BRP9 147 aa9.76□□□□□ -0.85
EXOSC4-201ENST00000316052 Q8N377 158 aa9.75□□□□□ -0.85
EXOSC4-201ENST00000316052 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
EXOSC4-201ENST00000316052 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
EXOSC4-201ENST00000316052 A6NJY4 79 aa9.73□□□□□ -0.85
EXOSC4-201ENST00000316052 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
EXOSC4-201ENST00000316052 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
EXOSC4-201ENST00000316052 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
EXOSC4-201ENST00000316052 LITAFQ99732 161 aa9.72□□□□□ -0.85
EXOSC4-201ENST00000316052 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
EXOSC4-201ENST00000316052 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
EXOSC4-201ENST00000316052 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
EXOSC4-201ENST00000316052 Q6ZRX8 168 aa9.71□□□□□ -0.86
EXOSC4-201ENST00000316052 IFITM1P13164 125 aa9.7□□□□□ -0.86
EXOSC4-201ENST00000316052 FXYD2P54710 66 aa9.7□□□□□ -0.86
EXOSC4-201ENST00000316052 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
EXOSC4-201ENST00000316052 COPS9Q8WXC6 57 aa9.69□□□□□ -0.86
EXOSC4-201ENST00000316052 SLC25A20O43772 301 aa9.68□□□□□ -0.86
EXOSC4-201ENST00000316052 IGLV6-57P01721 117 aa9.68□□□□□ -0.86
EXOSC4-201ENST00000316052 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
EXOSC4-201ENST00000316052 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
EXOSC4-201ENST00000316052 XP32Q5T750 250 aa9.66□□□□□ -0.86
EXOSC4-201ENST00000316052 NDUFC2O95298 119 aa9.65□□□□□ -0.86
EXOSC4-201ENST00000316052 NPC2P61916 151 aa9.65□□□□□ -0.86
EXOSC4-201ENST00000316052 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.86
EXOSC4-201ENST00000316052 SOSTDC1Q6X4U4 206 aa9.65□□□□□ -0.86
EXOSC4-201ENST00000316052 ST20-AS1Q8NBB2 130 aa9.65□□□□□ -0.86
EXOSC4-201ENST00000316052 A0A1B0GV90 55 aa9.64□□□□□ -0.87
EXOSC4-201ENST00000316052 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
EXOSC4-201ENST00000316052 NHP2Q9NX24 153 aaKnown RBP9.64□□□□□ -0.87
EXOSC4-201ENST00000316052 FSIP2Q5CZC0 6907 aa9.64□□□□□ -0.87
EXOSC4-201ENST00000316052 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
EXOSC4-201ENST00000316052 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
EXOSC4-201ENST00000316052 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
EXOSC4-201ENST00000316052 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
EXOSC4-201ENST00000316052 C9orf118A6NHY6 69 aa9.62□□□□□ -0.87
EXOSC4-201ENST00000316052 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
EXOSC4-201ENST00000316052 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
EXOSC4-201ENST00000316052 A4D1N5 150 aa9.6□□□□□ -0.87
EXOSC4-201ENST00000316052 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms