RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 LINC00575Q6W349 94 aa8.03□□□□□ -1.12
LDLRAD3-201ENST00000315571 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
LDLRAD3-201ENST00000315571 MP68P56378 58 aa8.01□□□□□ -1.13
LDLRAD3-201ENST00000315571 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
LDLRAD3-201ENST00000315571 LOC110117498A0A087WWA1 95 aa8□□□□□ -1.13
LDLRAD3-201ENST00000315571 NOP10Q9NPE3 64 aaKnown RBP8□□□□□ -1.13
LDLRAD3-201ENST00000315571 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
LDLRAD3-201ENST00000315571 A0A096LPF7 62 aa7.99□□□□□ -1.13
LDLRAD3-201ENST00000315571 KLK12Q9UKR0 248 aa7.99□□□□□ -1.13
LDLRAD3-201ENST00000315571 IGLV4-60A0A075B6I1 120 aa7.99□□□□□ -1.13
LDLRAD3-201ENST00000315571 CMC4P56277 68 aaPredicted RBP7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 LOC100131303A0A0U1RQF7 123 aa7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 OXLD1Q5BKU9 147 aa7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 LINC00588Q9Y4M8 146 aa7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 VWFP04275 2813 aa7.98□□□□□ -1.13
LDLRAD3-201ENST00000315571 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
LDLRAD3-201ENST00000315571 COX7BP24311 80 aa7.96□□□□□ -1.13
LDLRAD3-201ENST00000315571 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.13
LDLRAD3-201ENST00000315571 PSCAO43653 123 aa7.96□□□□□ -1.14
LDLRAD3-201ENST00000315571 C16orf90A8MZG2 172 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 LIMD2Q9BT23 127 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
LDLRAD3-201ENST00000315571 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 NDUFB1O75438 58 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 DEFB130BP0DP73 79 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 DEFB130AP0DP74 79 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
LDLRAD3-201ENST00000315571 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 H3BQ85 93 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 C7orf65Q6ZTY9 151 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 LINC00959A0A1B0GUT2 108 aa7.93□□□□□ -1.14
LDLRAD3-201ENST00000315571 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
LDLRAD3-201ENST00000315571 LCA10Q71F78 164 aa7.92□□□□□ -1.14
LDLRAD3-201ENST00000315571 LINC00167Q96N53 147 aa7.92□□□□□ -1.14
LDLRAD3-201ENST00000315571 A0A0J9YWU9 116 aa7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 ANGP03950 147 aaKnown RBP7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 WFDC10BQ8IUB3 73 aa7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 Q5VV11 94 aa7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 C19orf73Q9NVV2 129 aa7.91□□□□□ -1.14
LDLRAD3-201ENST00000315571 EGFEM1PQ0D2K5 195 aa7.9□□□□□ -1.15
LDLRAD3-201ENST00000315571 KRTAP10-11P60412 298 aa7.89□□□□□ -1.15
LDLRAD3-201ENST00000315571 Q8IZM0 81 aa7.88□□□□□ -1.15
LDLRAD3-201ENST00000315571 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
LDLRAD3-201ENST00000315571 ANK2Q01484 3957 aa7.88□□□□□ -1.15
LDLRAD3-201ENST00000315571 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
LDLRAD3-201ENST00000315571 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
LDLRAD3-201ENST00000315571 PKD1L1Q8TDX9 2849 aa7.86□□□□□ -1.15
LDLRAD3-201ENST00000315571 IGHV4-30-4P0DP06 118 aa7.86□□□□□ -1.15
LDLRAD3-201ENST00000315571 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
LDLRAD3-201ENST00000315571 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
LDLRAD3-201ENST00000315571 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
LDLRAD3-201ENST00000315571 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
LDLRAD3-201ENST00000315571 NOTCH1P46531 2555 aa7.84□□□□□ -1.15
LDLRAD3-201ENST00000315571 GYPEP15421 78 aa7.83□□□□□ -1.16
LDLRAD3-201ENST00000315571 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
LDLRAD3-201ENST00000315571 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
LDLRAD3-201ENST00000315571 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
LDLRAD3-201ENST00000315571 COX17Q14061 63 aa7.82□□□□□ -1.16
LDLRAD3-201ENST00000315571 VPREB1P12018 145 aa7.82□□□□□ -1.16
LDLRAD3-201ENST00000315571 KPRPQ5T749 579 aaPredicted RBP7.82□□□□□ -1.16
LDLRAD3-201ENST00000315571 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
LDLRAD3-201ENST00000315571 GIG44P09565 113 aaPredicted RBP7.8□□□□□ -1.16
LDLRAD3-201ENST00000315571 DEFB135Q30KP9 77 aa7.8□□□□□ -1.16
LDLRAD3-201ENST00000315571 NBEAL1Q6ZS30 2694 aa7.79□□□□□ -1.16
LDLRAD3-201ENST00000315571 K7EIL1 84 aa7.79□□□□□ -1.16
LDLRAD3-201ENST00000315571 HTN3P15516 51 aa7.79□□□□□ -1.16
LDLRAD3-201ENST00000315571 PHF5AQ7RTV0 110 aaKnown RBP7.78□□□□□ -1.16
LDLRAD3-201ENST00000315571 LOC101927531A0A1B0GV80 90 aa7.77□□□□□ -1.16
LDLRAD3-201ENST00000315571 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
LDLRAD3-201ENST00000315571 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
LDLRAD3-201ENST00000315571 CSNK1G2-AS1Q8NCQ2 148 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 H0Y9P7 68 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 K7EQZ3 153 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 REG3AQ06141 175 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 CMYA5Q8N3K9 4069 aa7.76□□□□□ -1.17
LDLRAD3-201ENST00000315571 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
LDLRAD3-201ENST00000315571 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
LDLRAD3-201ENST00000315571 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
LDLRAD3-201ENST00000315571 A6NN06 94 aa7.74□□□□□ -1.17
LDLRAD3-201ENST00000315571 C16orf74Q96GX8 76 aa7.74□□□□□ -1.17
LDLRAD3-201ENST00000315571 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
LDLRAD3-201ENST00000315571 Q8NDZ9 215 aa7.73□□□□□ -1.17
LDLRAD3-201ENST00000315571 LINC00313P59037 77 aa7.73□□□□□ -1.17
LDLRAD3-201ENST00000315571 MOBPQ13875 183 aa7.73□□□□□ -1.17
LDLRAD3-201ENST00000315571 COA5Q86WW8 74 aa7.72□□□□□ -1.17
LDLRAD3-201ENST00000315571 X6R8D5 127 aa7.72□□□□□ -1.17
LDLRAD3-201ENST00000315571 KIAA0087Q14695 138 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms