RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 Q6ZVH6 145 aa4.92□□□□□ -1.62
CDC42-201ENST00000315554 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
CDC42-201ENST00000315554 A0A0U1RQV1 116 aa4.91□□□□□ -1.62
CDC42-201ENST00000315554 C9JAW5 83 aa4.91□□□□□ -1.62
CDC42-201ENST00000315554 J3QQQ9 107 aa4.91□□□□□ -1.62
CDC42-201ENST00000315554 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
CDC42-201ENST00000315554 HNRNPA3P51991 378 aaKnown RBP4.91□□□□□ -1.62
CDC42-201ENST00000315554 LINC00158P58513 81 aa4.91□□□□□ -1.62
CDC42-201ENST00000315554 C7orf33Q8WU49 177 aa4.91□□□□□ -1.62
CDC42-201ENST00000315554 A6NDN8 102 aa4.9□□□□□ -1.62
CDC42-201ENST00000315554 SMIM13P0DJ93 91 aa4.9□□□□□ -1.62
CDC42-201ENST00000315554 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.62
CDC42-201ENST00000315554 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.62
CDC42-201ENST00000315554 JOSD1Q15040 202 aaPredicted RBP4.9□□□□□ -1.62
CDC42-201ENST00000315554 MEIG1Q5JSS6 88 aa4.9□□□□□ -1.62
CDC42-201ENST00000315554 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.62
CDC42-201ENST00000315554 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
CDC42-201ENST00000315554 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 MYMXA0A1B0GTQ4 84 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 E9PLD3 99 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 INAFM2P0DMQ5 153 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 Q6ZVQ6 151 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
CDC42-201ENST00000315554 HSD52Q0P140 79 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 MRPL55Q7Z7F7 128 aaKnown RBP4.88□□□□□ -1.63
CDC42-201ENST00000315554 DAND5Q8N907 189 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 UBE2BP63146 152 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 PRR3P79522 188 aaKnown RBP4.88□□□□□ -1.63
CDC42-201ENST00000315554 SFTA2Q6UW10 78 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 MIR7-3HGQ8N6C7 128 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 Q8NDZ9 215 aa4.88□□□□□ -1.63
CDC42-201ENST00000315554 NMUP48645 174 aa4.87□□□□□ -1.63
CDC42-201ENST00000315554 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDC42-201ENST00000315554 COX17Q14061 63 aa4.87□□□□□ -1.63
CDC42-201ENST00000315554 PSORS1C2Q9UIG4 136 aa4.87□□□□□ -1.63
CDC42-201ENST00000315554 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 NPC2P61916 151 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 Q5XG85 94 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
CDC42-201ENST00000315554 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
CDC42-201ENST00000315554 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
CDC42-201ENST00000315554 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
CDC42-201ENST00000315554 LINC00167Q96N53 147 aa4.85□□□□□ -1.63
CDC42-201ENST00000315554 NCR3O14931 201 aa4.84□□□□□ -1.63
CDC42-201ENST00000315554 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
CDC42-201ENST00000315554 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
CDC42-201ENST00000315554 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 NDUFC2O95298 119 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 GTF2H5Q6ZYL4 71 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
CDC42-201ENST00000315554 SOSTDC1Q6X4U4 206 aa4.82□□□□□ -1.64
CDC42-201ENST00000315554 LITAFQ99732 161 aa4.82□□□□□ -1.64
CDC42-201ENST00000315554 MIEN1Q9BRT3 115 aa4.82□□□□□ -1.64
CDC42-201ENST00000315554 C8orf87E5RJ46 101 aa4.81□□□□□ -1.64
CDC42-201ENST00000315554 BATFQ16520 125 aa4.81□□□□□ -1.64
CDC42-201ENST00000315554 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
CDC42-201ENST00000315554 J3QR89 54 aa4.81□□□□□ -1.64
CDC42-201ENST00000315554 IGLV7-43P04211 117 aa4.81□□□□□ -1.64
CDC42-201ENST00000315554 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
CDC42-201ENST00000315554 M0R378 163 aa4.8□□□□□ -1.64
CDC42-201ENST00000315554 LINC00308Q8TCZ7 52 aa4.8□□□□□ -1.64
CDC42-201ENST00000315554 TIMM17BO60830 172 aa4.79□□□□□ -1.64
CDC42-201ENST00000315554 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 BCE1O60756 84 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 SPATA45Q537H7 98 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
CDC42-201ENST00000315554 NAA38Q9BRA0 125 aaKnown RBP4.78□□□□□ -1.64
CDC42-201ENST00000315554 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
CDC42-201ENST00000315554 UBE2AP49459 152 aa4.77□□□□□ -1.65
CDC42-201ENST00000315554 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
CDC42-201ENST00000315554 VAMP8Q9BV40 100 aa4.77□□□□□ -1.65
CDC42-201ENST00000315554 A0A1B0GWB2 263 aa4.76□□□□□ -1.65
CDC42-201ENST00000315554 PRLHP81277 87 aa4.76□□□□□ -1.65
CDC42-201ENST00000315554 MUSTN1Q8IVN3 82 aa4.76□□□□□ -1.65
CDC42-201ENST00000315554 SPANXDQ9BXN6 97 aa4.76□□□□□ -1.65
CDC42-201ENST00000315554 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
CDC42-201ENST00000315554 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
CDC42-201ENST00000315554 H0Y9J4 135 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 ZNF861PO60384 105 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 COX8AP10176 69 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 S100A7L2Q5SY68 101 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 Q6Q795 121 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 DIRC1Q969H9 104 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 TRBV10-2A0A0K0K1G8 114 aa4.75□□□□□ -1.65
CDC42-201ENST00000315554 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
CDC42-201ENST00000315554 RPL28P46779 137 aaKnown RBP4.75□□□□□ -1.65
CDC42-201ENST00000315554 LAMTOR3Q9UHA4 124 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms