RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 C15orf56Q8N910 161 aa8.85□□□□□ -0.99
SKA3-202ENST00000314759 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
SKA3-202ENST00000314759 IGKV4-1P06312 121 aa8.84□□□□□ -0.99
SKA3-202ENST00000314759 ATRQ13535 2644 aa8.84□□□□□ -0.99
SKA3-202ENST00000314759 Q6ZRP5 223 aa8.83□□□□□ -1
SKA3-202ENST00000314759 BRK1Q8WUW1 75 aa8.83□□□□□ -1
SKA3-202ENST00000314759 OCR1Q9BZK8 76 aa8.83□□□□□ -1
SKA3-202ENST00000314759 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
SKA3-202ENST00000314759 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
SKA3-202ENST00000314759 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
SKA3-202ENST00000314759 C3orf84H3BNL1 204 aa8.81□□□□□ -1
SKA3-202ENST00000314759 A0A0U1RQV1 116 aa8.81□□□□□ -1
SKA3-202ENST00000314759 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
SKA3-202ENST00000314759 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
SKA3-202ENST00000314759 OTOGQ6ZRI0 2925 aa8.8□□□□□ -1
SKA3-202ENST00000314759 PRYO14603 147 aa8.8□□□□□ -1
SKA3-202ENST00000314759 TEP1Q99973 2627 aaKnown RBP8.79□□□□□ -1
SKA3-202ENST00000314759 ERC2-IT1O76042 136 aa8.79□□□□□ -1
SKA3-202ENST00000314759 FLNBO75369 2602 aaKnown RBP8.79□□□□□ -1
SKA3-202ENST00000314759 Q6ZTC4 211 aa8.78□□□□□ -1
SKA3-202ENST00000314759 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
SKA3-202ENST00000314759 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
SKA3-202ENST00000314759 H3BNG1 76 aa8.77□□□□□ -1
SKA3-202ENST00000314759 ESRGQ1W209 222 aa8.77□□□□□ -1
SKA3-202ENST00000314759 Q8N377 158 aa8.77□□□□□ -1
SKA3-202ENST00000314759 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1.01
SKA3-202ENST00000314759 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
SKA3-202ENST00000314759 RETNQ9HD89 108 aa8.77□□□□□ -1.01
SKA3-202ENST00000314759 INAFM1C9JVW0 142 aa8.77□□□□□ -1.01
SKA3-202ENST00000314759 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
SKA3-202ENST00000314759 SYCNQ0VAF6 134 aa8.75□□□□□ -1.01
SKA3-202ENST00000314759 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
SKA3-202ENST00000314759 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
SKA3-202ENST00000314759 FAM30AQ9NZY2 134 aa8.75□□□□□ -1.01
SKA3-202ENST00000314759 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
SKA3-202ENST00000314759 NKAPP1Q8N9T2 125 aa8.74□□□□□ -1.01
SKA3-202ENST00000314759 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
SKA3-202ENST00000314759 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
SKA3-202ENST00000314759 LINC01556Q5JQF7 62 aa8.71□□□□□ -1.01
SKA3-202ENST00000314759 F8WDY8 70 aa8.71□□□□□ -1.02
SKA3-202ENST00000314759 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
SKA3-202ENST00000314759 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
SKA3-202ENST00000314759 Q9BRP9 147 aa8.7□□□□□ -1.02
SKA3-202ENST00000314759 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
SKA3-202ENST00000314759 ANK2Q01484 3957 aa8.7□□□□□ -1.02
SKA3-202ENST00000314759 Q6ZRX8 168 aa8.69□□□□□ -1.02
SKA3-202ENST00000314759 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
SKA3-202ENST00000314759 FAM168BA1KXE4 195 aa8.68□□□□□ -1.02
SKA3-202ENST00000314759 OXLD1Q5BKU9 147 aa8.68□□□□□ -1.02
SKA3-202ENST00000314759 C1orf195Q5TG92 126 aa8.68□□□□□ -1.02
SKA3-202ENST00000314759 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
SKA3-202ENST00000314759 ST20-AS1Q8NBB2 130 aa8.67□□□□□ -1.02
SKA3-202ENST00000314759 TNP2Q05952 138 aa8.67□□□□□ -1.02
SKA3-202ENST00000314759 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
SKA3-202ENST00000314759 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
SKA3-202ENST00000314759 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
SKA3-202ENST00000314759 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
SKA3-202ENST00000314759 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
SKA3-202ENST00000314759 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
SKA3-202ENST00000314759 DEFB131BA0A096LNP1 70 aa8.65□□□□□ -1.03
SKA3-202ENST00000314759 A0A1B0GW54 56 aa8.65□□□□□ -1.03
SKA3-202ENST00000314759 SPRR1AP35321 89 aa8.64□□□□□ -1.03
SKA3-202ENST00000314759 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
SKA3-202ENST00000314759 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
SKA3-202ENST00000314759 Q8NBF4 154 aa8.64□□□□□ -1.03
SKA3-202ENST00000314759 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
SKA3-202ENST00000314759 LCE6AA0A183 80 aa8.63□□□□□ -1.03
SKA3-202ENST00000314759 DNAH10OSP0CZ25 163 aa8.63□□□□□ -1.03
SKA3-202ENST00000314759 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
SKA3-202ENST00000314759 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
SKA3-202ENST00000314759 DSCR10P59022 87 aa8.62□□□□□ -1.03
SKA3-202ENST00000314759 PRR4Q16378 134 aa8.61□□□□□ -1.03
SKA3-202ENST00000314759 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
SKA3-202ENST00000314759 K7EQZ3 153 aa8.61□□□□□ -1.03
SKA3-202ENST00000314759 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
SKA3-202ENST00000314759 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
SKA3-202ENST00000314759 V9GYY9 64 aa8.59□□□□□ -1.03
SKA3-202ENST00000314759 F8P00451 2351 aa8.59□□□□□ -1.03
SKA3-202ENST00000314759 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
SKA3-202ENST00000314759 PRB2P02812 416 aaPredicted RBP8.58□□□□□ -1.04
SKA3-202ENST00000314759 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
SKA3-202ENST00000314759 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
SKA3-202ENST00000314759 PSPHP1O15172 72 aa8.58□□□□□ -1.04
SKA3-202ENST00000314759 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
SKA3-202ENST00000314759 UBE2BP63146 152 aa8.57□□□□□ -1.04
SKA3-202ENST00000314759 DNAH1Q9P2D7 4330 aa8.56□□□□□ -1.04
SKA3-202ENST00000314759 Q1T7F1 81 aa8.56□□□□□ -1.04
SKA3-202ENST00000314759 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
SKA3-202ENST00000314759 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
SKA3-202ENST00000314759 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
SKA3-202ENST00000314759 LINC00476Q8WZB0 136 aa8.53□□□□□ -1.04
SKA3-202ENST00000314759 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
SKA3-202ENST00000314759 SEC61GP60059 68 aa8.53□□□□□ -1.04
SKA3-202ENST00000314759 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
SKA3-202ENST00000314759 PRR15Q8IV56 129 aa8.52□□□□□ -1.05
SKA3-202ENST00000314759 MAST4O15021 2626 aa8.52□□□□□ -1.05
SKA3-202ENST00000314759 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
SKA3-202ENST00000314759 PSCAO43653 123 aa8.5□□□□□ -1.05
SKA3-202ENST00000314759 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
SKA3-202ENST00000314759 CMYA5Q8N3K9 4069 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms