RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
TPM3-203ENST00000312970 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
TPM3-203ENST00000312970 IFI27L1Q96BM0 104 aa4.68□□□□□ -1.66
TPM3-203ENST00000312970 CHCHD1Q96BP2 118 aaKnown RBP4.68□□□□□ -1.66
TPM3-203ENST00000312970 OCR1Q9BZK8 76 aa4.68□□□□□ -1.66
TPM3-203ENST00000312970 LINC00587B1AMM8 73 aa4.67□□□□□ -1.66
TPM3-203ENST00000312970 SNAPINO95295 136 aa4.67□□□□□ -1.66
TPM3-203ENST00000312970 SMIM13P0DJ93 91 aa4.67□□□□□ -1.66
TPM3-203ENST00000312970 SPRR4Q96PI1 79 aa4.67□□□□□ -1.66
TPM3-203ENST00000312970 HIST1H4GQ99525 98 aa4.67□□□□□ -1.66
TPM3-203ENST00000312970 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
TPM3-203ENST00000312970 NDUFA5Q16718 116 aa4.66□□□□□ -1.66
TPM3-203ENST00000312970 MEIG1Q5JSS6 88 aa4.66□□□□□ -1.66
TPM3-203ENST00000312970 SVBPQ8N300 66 aa4.66□□□□□ -1.66
TPM3-203ENST00000312970 LINC00337Q8N6G1 96 aa4.66□□□□□ -1.66
TPM3-203ENST00000312970 KCNQ1DNQ9H478 68 aa4.66□□□□□ -1.66
TPM3-203ENST00000312970 A6NDN8 102 aa4.65□□□□□ -1.67
TPM3-203ENST00000312970 SPRR1AP35321 89 aa4.65□□□□□ -1.67
TPM3-203ENST00000312970 MIR7-3HGQ8N6C7 128 aa4.65□□□□□ -1.67
TPM3-203ENST00000312970 SMCR5Q8TEV8 140 aa4.65□□□□□ -1.67
TPM3-203ENST00000312970 MYMXA0A1B0GTQ4 84 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 ETDCA0A1B0GVM5 59 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 NCR3O14931 201 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 S100A12P80511 92 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
TPM3-203ENST00000312970 YPEL4Q96NS1 127 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 SPANXB1Q9NS25 103 aaPredicted RBP4.64□□□□□ -1.67
TPM3-203ENST00000312970 NDUFA12Q9UI09 145 aa4.64□□□□□ -1.67
TPM3-203ENST00000312970 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
TPM3-203ENST00000312970 SPINK1P00995 79 aa4.63□□□□□ -1.67
TPM3-203ENST00000312970 FAM19A2Q8N3H0 131 aa4.63□□□□□ -1.67
TPM3-203ENST00000312970 DAND5Q8N907 189 aa4.63□□□□□ -1.67
TPM3-203ENST00000312970 Q8NBF4 154 aa4.63□□□□□ -1.67
TPM3-203ENST00000312970 LOC107984156A0A0G2JMH3 177 aa4.62□□□□□ -1.67
TPM3-203ENST00000312970 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
TPM3-203ENST00000312970 LEPROTO15243 131 aa4.62□□□□□ -1.67
TPM3-203ENST00000312970 LINC01547P58512 204 aaPredicted RBP4.62□□□□□ -1.67
TPM3-203ENST00000312970 CD164Q04900 197 aa4.62□□□□□ -1.67
TPM3-203ENST00000312970 ARL17AQ8IVW1 177 aa4.62□□□□□ -1.67
TPM3-203ENST00000312970 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
TPM3-203ENST00000312970 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
TPM3-203ENST00000312970 ADAMTSL4-AS1Q5T5F5 129 aa4.61□□□□□ -1.67
TPM3-203ENST00000312970 SSBP3-AS1Q7Z2R9 100 aa4.61□□□□□ -1.67
TPM3-203ENST00000312970 TRBV10-2A0A0K0K1G8 114 aa4.6□□□□□ -1.67
TPM3-203ENST00000312970 LEPROTL1O95214 131 aa4.6□□□□□ -1.67
TPM3-203ENST00000312970 PLNP26678 52 aa4.6□□□□□ -1.67
TPM3-203ENST00000312970 DDTP30046 118 aa4.6□□□□□ -1.67
TPM3-203ENST00000312970 J3QQQ9 107 aa4.59□□□□□ -1.67
TPM3-203ENST00000312970 ERC2-IT1O76042 136 aa4.59□□□□□ -1.67
TPM3-203ENST00000312970 TRGC2P03986 189 aa4.59□□□□□ -1.67
TPM3-203ENST00000312970 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
TPM3-203ENST00000312970 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.67
TPM3-203ENST00000312970 SERF1AO75920 110 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 DPM2O94777 84 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 NDUFC2O95298 119 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 LGALS3P17931 250 aaKnown RBP4.58□□□□□ -1.68
TPM3-203ENST00000312970 NMUP48645 174 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 HERVK_113P61574 105 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 RPS29P62273 56 aaKnown RBP4.58□□□□□ -1.68
TPM3-203ENST00000312970 MOBPQ13875 183 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 S100A7L2Q5SY68 101 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 Q6ZVH6 145 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 Q9BRP9 147 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 MIEN1Q9BRT3 115 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
TPM3-203ENST00000312970 IGLV6-57P01721 117 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 IGKCP01834 107 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 FABP4P15090 132 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 JOSD1Q15040 202 aaPredicted RBP4.57□□□□□ -1.68
TPM3-203ENST00000312970 ASB16-AS1Q495Z4 193 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 Q6ZRX8 168 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
TPM3-203ENST00000312970 SLC25A20O43772 301 aa4.56□□□□□ -1.68
TPM3-203ENST00000312970 Q8N377 158 aa4.56□□□□□ -1.68
TPM3-203ENST00000312970 TRAV23DV6A0A075B6W5 121 aa4.55□□□□□ -1.68
TPM3-203ENST00000312970 PMCHL2Q9BQD1 86 aa4.55□□□□□ -1.68
TPM3-203ENST00000312970 A0A0J9YXY3 114 aa4.54□□□□□ -1.68
TPM3-203ENST00000312970 ZNF73O43830 326 aaPredicted RBP4.54□□□□□ -1.68
TPM3-203ENST00000312970 HINT1P49773 126 aaPredicted RBP4.54□□□□□ -1.68
TPM3-203ENST00000312970 NPC2P61916 151 aa4.53□□□□□ -1.68
TPM3-203ENST00000312970 C9orf153Q5TBE3 101 aa4.53□□□□□ -1.68
TPM3-203ENST00000312970 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
TPM3-203ENST00000312970 ST20-AS1Q8NBB2 130 aa4.52□□□□□ -1.69
TPM3-203ENST00000312970 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
TPM3-203ENST00000312970 DHRS4-AS1Q9P1J3 65 aa4.52□□□□□ -1.69
TPM3-203ENST00000312970 COLCA2A8K830 154 aa4.51□□□□□ -1.69
TPM3-203ENST00000312970 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
TPM3-203ENST00000312970 OR13C6PQ8NH95 151 aa4.51□□□□□ -1.69
TPM3-203ENST00000312970 SYS1-DBNDD2H3BUS1 97 aa4.5□□□□□ -1.69
TPM3-203ENST00000312970 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
TPM3-203ENST00000312970 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
TPM3-203ENST00000312970 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
TPM3-203ENST00000312970 TIMM17BO60830 172 aa4.49□□□□□ -1.69
TPM3-203ENST00000312970 SPRR1BP22528 89 aa4.49□□□□□ -1.69
TPM3-203ENST00000312970 LITAFQ99732 161 aa4.49□□□□□ -1.69
TPM3-203ENST00000312970 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
TPM3-203ENST00000312970 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
TPM3-203ENST00000312970 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
TPM3-203ENST00000312970 LIMD2Q9BT23 127 aa4.48□□□□□ -1.69
TPM3-203ENST00000312970 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms