RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 H0Y9J4 135 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 SPRR1AP35321 89 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 UBE2AP49459 152 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 OR13C6PQ8NH95 151 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 LOC105371267A0A1B0GV96 52 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 PRYO14603 147 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
PDE4D-201ENST00000309641 A4D1N5 150 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 HIST1H4GQ99525 98 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 HERC1Q15751 4861 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
PDE4D-201ENST00000309641 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
PDE4D-201ENST00000309641 PPDPFQ9H3Y8 114 aa5.47□□□□□ -1.53
PDE4D-201ENST00000309641 TRAV23DV6A0A075B6W5 121 aa5.46□□□□□ -1.54
PDE4D-201ENST00000309641 LCE2BO14633 110 aa5.46□□□□□ -1.54
PDE4D-201ENST00000309641 C12orf57Q99622 126 aa5.46□□□□□ -1.54
PDE4D-201ENST00000309641 LINC00518Q8N0U6 118 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 ANAPC11Q9NYG5 84 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 HIGD1BQ9P298 99 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 A6NDN8 102 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 B5MCH6 92 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
PDE4D-201ENST00000309641 OXTP01178 125 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 COPS9Q8WXC6 57 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 LINC01600Q96MT4 127 aa5.45□□□□□ -1.54
PDE4D-201ENST00000309641 S100A12P80511 92 aa5.44□□□□□ -1.54
PDE4D-201ENST00000309641 Q9BRP9 147 aa5.44□□□□□ -1.54
PDE4D-201ENST00000309641 PRO1933Q9H354 126 aa5.44□□□□□ -1.54
PDE4D-201ENST00000309641 TNXBP22105 4242 aa5.44□□□□□ -1.54
PDE4D-201ENST00000309641 J3QL48 77 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 SMCR5Q8TEV8 140 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 Q6ZRX8 168 aa5.43□□□□□ -1.54
PDE4D-201ENST00000309641 SMIM6P0DI80 62 aa5.42□□□□□ -1.54
PDE4D-201ENST00000309641 FXYD2P54710 66 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 CEND1Q8N111 149 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 A0A087X002 238 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 TRAV13-2A0A0B4J235 113 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 CFC1P0CG37 223 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
PDE4D-201ENST00000309641 RPL13AP40429 203 aaKnown RBP5.4□□□□□ -1.55
PDE4D-201ENST00000309641 TAL2Q16559 108 aa5.39□□□□□ -1.55
PDE4D-201ENST00000309641 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
PDE4D-201ENST00000309641 H7C2G1 150 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 ELOF1P60002 83 aaKnown RBP5.38□□□□□ -1.55
PDE4D-201ENST00000309641 COX7BP24311 80 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 HINT1P49773 126 aaPredicted RBP5.38□□□□□ -1.55
PDE4D-201ENST00000309641 HSD52Q0P140 79 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 ST20-AS1Q8NBB2 130 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
PDE4D-201ENST00000309641 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
PDE4D-201ENST00000309641 K7ERJ3 54 aa5.36□□□□□ -1.55
PDE4D-201ENST00000309641 GAGE2AQ6NT46 116 aa5.36□□□□□ -1.55
PDE4D-201ENST00000309641 C3orf22Q8N5N4 141 aa5.36□□□□□ -1.55
PDE4D-201ENST00000309641 RAB37Q96AX2 223 aa5.36□□□□□ -1.55
PDE4D-201ENST00000309641 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
PDE4D-201ENST00000309641 CRYGAP11844 174 aa5.35□□□□□ -1.55
PDE4D-201ENST00000309641 NHP2Q9NX24 153 aaKnown RBP5.35□□□□□ -1.55
PDE4D-201ENST00000309641 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
PDE4D-201ENST00000309641 BVES-AS1Q5T3Y7 98 aa5.35□□□□□ -1.55
PDE4D-201ENST00000309641 PCP4P48539 62 aa5.34□□□□□ -1.55
PDE4D-201ENST00000309641 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
PDE4D-201ENST00000309641 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
PDE4D-201ENST00000309641 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
PDE4D-201ENST00000309641 DHRS4-AS1Q9P1J3 65 aa5.33□□□□□ -1.56
PDE4D-201ENST00000309641 PRO1854Q9UHT4 67 aa5.33□□□□□ -1.56
PDE4D-201ENST00000309641 ZNF706Q9Y5V0 76 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-201ENST00000309641 LINC00575Q6W349 94 aa5.32□□□□□ -1.56
PDE4D-201ENST00000309641 DEFB105AQ8NG35 78 aa5.31□□□□□ -1.56
PDE4D-201ENST00000309641 TSTD3H0UI37 97 aa5.31□□□□□ -1.56
PDE4D-201ENST00000309641 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
PDE4D-201ENST00000309641 VAMP3Q15836 100 aa5.31□□□□□ -1.56
PDE4D-201ENST00000309641 Q1RN00 199 aa5.31□□□□□ -1.56
PDE4D-201ENST00000309641 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
PDE4D-201ENST00000309641 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
PDE4D-201ENST00000309641 TRIAP1O43715 76 aa5.3□□□□□ -1.56
PDE4D-201ENST00000309641 TSPAN13O95857 204 aa5.3□□□□□ -1.56
PDE4D-201ENST00000309641 SPRR1BP22528 89 aa5.29□□□□□ -1.56
PDE4D-201ENST00000309641 MOBPQ13875 183 aa5.29□□□□□ -1.56
PDE4D-201ENST00000309641 hADV29S1A0JD25 119 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 Q6ZQY7 126 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 Q8N377 158 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 IGLV5-48A0A075B6I7 105 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 SLC25A20O43772 301 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 SMIM29Q86T20 159 aa5.28□□□□□ -1.56
PDE4D-201ENST00000309641 Q8NBF4 154 aa5.27□□□□□ -1.57
PDE4D-201ENST00000309641 CLEC2BQ92478 149 aa5.27□□□□□ -1.57
PDE4D-201ENST00000309641 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
PDE4D-201ENST00000309641 TEX49A0A1B0GTD5 131 aa5.26□□□□□ -1.57
PDE4D-201ENST00000309641 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms