RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 MT1HL1P0DM35 61 aa13.3□□□□□ -0.28
SNUPN-201ENST00000308588 SLC25A34Q6PIV7 304 aa13.3□□□□□ -0.28
SNUPN-201ENST00000308588 KRTAP1-4P0C5Y4 121 aa13.29□□□□□ -0.28
SNUPN-201ENST00000308588 OR13C6PQ8NH95 151 aa13.29□□□□□ -0.28
SNUPN-201ENST00000308588 DMBT1Q9UGM3 2413 aaPredicted RBP13.29□□□□□ -0.28
SNUPN-201ENST00000308588 TRAV23DV6A0A075B6W5 121 aa13.29□□□□□ -0.28
SNUPN-201ENST00000308588 ETDCA0A1B0GVM5 59 aa13.27□□□□□ -0.29
SNUPN-201ENST00000308588 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
SNUPN-201ENST00000308588 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
SNUPN-201ENST00000308588 HIGD1BQ9P298 99 aa13.26□□□□□ -0.29
SNUPN-201ENST00000308588 TNXBP22105 4242 aa13.26□□□□□ -0.29
SNUPN-201ENST00000308588 B5MCH6 92 aa13.25□□□□□ -0.29
SNUPN-201ENST00000308588 ZNF73O43830 326 aaPredicted RBP13.24□□□□□ -0.29
SNUPN-201ENST00000308588 HIGD2AQ9BW72 106 aa13.24□□□□□ -0.29
SNUPN-201ENST00000308588 A4D1N5 150 aa13.23□□□□□ -0.29
SNUPN-201ENST00000308588 CBY1Q9Y3M2 126 aa13.23□□□□□ -0.29
SNUPN-201ENST00000308588 KRTAP10-8P60410 259 aa13.23□□□□□ -0.29
SNUPN-201ENST00000308588 A6NDN8 102 aa13.21□□□□□ -0.29
SNUPN-201ENST00000308588 LOC105371267A0A1B0GV96 52 aa13.2□□□□□ -0.3
SNUPN-201ENST00000308588 Q6ZRX8 168 aa13.2□□□□□ -0.3
SNUPN-201ENST00000308588 TRAV13-2A0A0B4J235 113 aa13.19□□□□□ -0.3
SNUPN-201ENST00000308588 PRR26Q8N8Z3 221 aa13.19□□□□□ -0.3
SNUPN-201ENST00000308588 SMCR5Q8TEV8 140 aa13.19□□□□□ -0.3
SNUPN-201ENST00000308588 HERC1Q15751 4861 aa13.18□□□□□ -0.3
SNUPN-201ENST00000308588 Q9BRP9 147 aa13.18□□□□□ -0.3
SNUPN-201ENST00000308588 ANAPC11Q9NYG5 84 aa13.17□□□□□ -0.3
SNUPN-201ENST00000308588 HINT1P49773 126 aaPredicted RBP13.15□□□□□ -0.3
SNUPN-201ENST00000308588 C6orf99Q4VX62 202 aa13.15□□□□□ -0.3
SNUPN-201ENST00000308588 ERC2-IT1O76042 136 aa13.14□□□□□ -0.31
SNUPN-201ENST00000308588 TAL2Q16559 108 aa13.13□□□□□ -0.31
SNUPN-201ENST00000308588 C12orf57Q99622 126 aa13.13□□□□□ -0.31
SNUPN-201ENST00000308588 A0A087X002 238 aa13.13□□□□□ -0.31
SNUPN-201ENST00000308588 UQCR10Q9UDW1 63 aa13.13□□□□□ -0.31
SNUPN-201ENST00000308588 SMIM11BQ8TCY0 68 aa13.12□□□□□ -0.31
SNUPN-201ENST00000308588 SPRR4Q96PI1 79 aa13.12□□□□□ -0.31
SNUPN-201ENST00000308588 SMIM6P0DI80 62 aa13.11□□□□□ -0.31
SNUPN-201ENST00000308588 CEND1Q8N111 149 aa13.11□□□□□ -0.31
SNUPN-201ENST00000308588 ELOF1P60002 83 aaKnown RBP13.1□□□□□ -0.31
SNUPN-201ENST00000308588 CFC1BP0CG36 223 aa13.09□□□□□ -0.31
SNUPN-201ENST00000308588 CFC1P0CG37 223 aa13.09□□□□□ -0.31
SNUPN-201ENST00000308588 CRYGAP11844 174 aa13.09□□□□□ -0.31
SNUPN-201ENST00000308588 COX7BP24311 80 aa13.09□□□□□ -0.31
SNUPN-201ENST00000308588 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
SNUPN-201ENST00000308588 FAM229BQ4G0N7 80 aa13.09□□□□□ -0.31
SNUPN-201ENST00000308588 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
SNUPN-201ENST00000308588 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.31
SNUPN-201ENST00000308588 FXYD2P54710 66 aa13.06□□□□□ -0.32
SNUPN-201ENST00000308588 KRTAP13-2Q52LG2 175 aa13.06□□□□□ -0.32
SNUPN-201ENST00000308588 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
SNUPN-201ENST00000308588 HSD52Q0P140 79 aa13.05□□□□□ -0.32
SNUPN-201ENST00000308588 DHRS4-AS1Q9P1J3 65 aa13.05□□□□□ -0.32
SNUPN-201ENST00000308588 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
SNUPN-201ENST00000308588 A0A0B4J2C4 111 aa13.03□□□□□ -0.32
SNUPN-201ENST00000308588 LINC00483Q53H64 154 aa13.03□□□□□ -0.32
SNUPN-201ENST00000308588 GAGE2AQ6NT46 116 aa13.03□□□□□ -0.32
SNUPN-201ENST00000308588 TMEM238LA0A1B0GVL6 79 aa13.02□□□□□ -0.33
SNUPN-201ENST00000308588 A6NJY4 79 aa13.02□□□□□ -0.33
SNUPN-201ENST00000308588 ST20-AS1Q8NBB2 130 aa13.02□□□□□ -0.33
SNUPN-201ENST00000308588 RAB37Q96AX2 223 aa13.02□□□□□ -0.33
SNUPN-201ENST00000308588 TYMSOSQ8TAI1 123 aa13.01□□□□□ -0.33
SNUPN-201ENST00000308588 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
SNUPN-201ENST00000308588 H7C2G1 150 aa12.98□□□□□ -0.33
SNUPN-201ENST00000308588 VAMP3Q15836 100 aa12.97□□□□□ -0.33
SNUPN-201ENST00000308588 PRO1854Q9UHT4 67 aa12.95□□□□□ -0.34
SNUPN-201ENST00000308588 NHP2Q9NX24 153 aaKnown RBP12.93□□□□□ -0.34
SNUPN-201ENST00000308588 LINC00575Q6W349 94 aa12.93□□□□□ -0.34
SNUPN-201ENST00000308588 SPRR1BP22528 89 aa12.92□□□□□ -0.34
SNUPN-201ENST00000308588 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
SNUPN-201ENST00000308588 K7ERJ3 54 aa12.89□□□□□ -0.35
SNUPN-201ENST00000308588 SLC25A20O43772 301 aa12.88□□□□□ -0.35
SNUPN-201ENST00000308588 Q1RN00 199 aa12.88□□□□□ -0.35
SNUPN-201ENST00000308588 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
SNUPN-201ENST00000308588 CTAG1AP78358 180 aa12.88□□□□□ -0.35
SNUPN-201ENST00000308588 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
SNUPN-201ENST00000308588 IGLV9-49A0A0B4J1Y8 123 aa12.87□□□□□ -0.35
SNUPN-201ENST00000308588 IGLV5-48A0A075B6I7 105 aa12.86□□□□□ -0.35
SNUPN-201ENST00000308588 hADV29S1A0JD25 119 aa12.86□□□□□ -0.35
SNUPN-201ENST00000308588 TSTD3H0UI37 97 aa12.86□□□□□ -0.35
SNUPN-201ENST00000308588 LINC00304Q8N9R0 145 aa12.86□□□□□ -0.35
SNUPN-201ENST00000308588 TEX49A0A1B0GTD5 131 aa12.85□□□□□ -0.35
SNUPN-201ENST00000308588 HMCN2Q8NDA2 5059 aa12.84□□□□□ -0.35
SNUPN-201ENST00000308588 MOBPQ13875 183 aa12.84□□□□□ -0.35
SNUPN-201ENST00000308588 H0YGX0 51 aa12.83□□□□□ -0.36
SNUPN-201ENST00000308588 TSPAN13O95857 204 aa12.83□□□□□ -0.36
SNUPN-201ENST00000308588 Q8NBF4 154 aa12.83□□□□□ -0.36
SNUPN-201ENST00000308588 SSBP3-AS1Q7Z2R9 100 aa12.82□□□□□ -0.36
SNUPN-201ENST00000308588 TRIAP1O43715 76 aa12.81□□□□□ -0.36
SNUPN-201ENST00000308588 Q6ZQY7 126 aa12.81□□□□□ -0.36
SNUPN-201ENST00000308588 SMIM29Q86T20 159 aa12.81□□□□□ -0.36
SNUPN-201ENST00000308588 Q8N377 158 aa12.81□□□□□ -0.36
SNUPN-201ENST00000308588 LAMTOR3Q9UHA4 124 aa12.81□□□□□ -0.36
SNUPN-201ENST00000308588 FAM218AQ96MZ4 157 aa12.8□□□□□ -0.36
SNUPN-201ENST00000308588 M0R143 59 aa12.79□□□□□ -0.36
SNUPN-201ENST00000308588 C9orf153Q5TBE3 101 aa12.78□□□□□ -0.36
SNUPN-201ENST00000308588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.78□□□□□ -0.36
SNUPN-201ENST00000308588 SPAG11AQ6PDA7 123 aa12.77□□□□□ -0.37
SNUPN-201ENST00000308588 PSMB2P49721 201 aa12.75□□□□□ -0.37
SNUPN-201ENST00000308588 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
SNUPN-201ENST00000308588 SNCGO76070 127 aa12.72□□□□□ -0.37
SNUPN-201ENST00000308588 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms