RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DLEU1O43261 78 aa6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 RPL13AP40429 203 aaKnown RBP6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 HIST1H4GQ99525 98 aa6.61□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 DMBT1Q9UGM3 2413 aaPredicted RBP6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 A6NDN8 102 aa6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 PYY3Q5JQD4 70 aa6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 SLC25A34Q6PIV7 304 aa6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 TRAV13-2A0A0B4J235 113 aa6.59□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 B5MCH6 92 aa6.59□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 Q6ZRX8 168 aa6.59□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
CSPG4P1Y-201ENST00000306641 CRYGAP11844 174 aa6.57□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 KRTAP10-8P60410 259 aa6.57□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 SMCR5Q8TEV8 140 aa6.57□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 LRP1Q07954 4544 aaKnown RBP6.57□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 A4D1N5 150 aa6.56□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 FAM229BQ4G0N7 80 aa6.56□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 HIGD1BQ9P298 99 aa6.56□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 A0A087X002 238 aa6.54□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 COX7BP24311 80 aa6.54□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 Q9BRP9 147 aa6.54□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 C12orf57Q99622 126 aa6.53□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
CSPG4P1Y-201ENST00000306641 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 A6NJY4 79 aa6.52□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 TAL2Q16559 108 aa6.52□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 GAGE2AQ6NT46 116 aa6.52□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 SMIM11BQ8TCY0 68 aa6.51□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 VAMP3Q15836 100 aa6.5□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 CEND1Q8N111 149 aa6.5□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 HSD52Q0P140 79 aa6.48□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 TNXBP22105 4242 aa6.48□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 H7C2G1 150 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 SLC25A20O43772 301 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 CFC1P0CG37 223 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 Q1RN00 199 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 BVES-AS1Q5T3Y7 98 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 LINC00304Q8N9R0 145 aa6.47□□□□□ -1.37
CSPG4P1Y-201ENST00000306641 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 FXYD2P54710 66 aa6.45□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 C9orf153Q5TBE3 101 aa6.45□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 MOBPQ13875 183 aa6.44□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 DEFB105AQ8NG35 78 aa6.44□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 TSPAN13O95857 204 aa6.43□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 PRO1854Q9UHT4 67 aa6.43□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 SNCGO76070 127 aa6.42□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 SPRR1BP22528 89 aa6.42□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 Q8NBF4 154 aa6.42□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 hADV29S1A0JD25 119 aa6.41□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 CTAG1AP78358 180 aa6.4□□□□□ -1.38
CSPG4P1Y-201ENST00000306641 TSTD3H0UI37 97 aa6.39□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 H0YGX0 51 aa6.39□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 IGLV5-48A0A075B6I7 105 aa6.38□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 M0R143 59 aa6.38□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 Q6ZQY7 126 aa6.38□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 HERC1Q15751 4861 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 F8WEM9 126 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 K7ERJ3 54 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 SPINK1P00995 79 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 PSMB2P49721 201 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 PRR4Q16378 134 aa6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 COX6CP09669 75 aa6.36□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 LINC01547P58512 204 aaPredicted RBP6.36□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 TRIAP1O43715 76 aa6.35□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 Q8N377 158 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms