RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MYO15AQ9UKN7 3530 aa6.09□□□□□ -1.43
PTPRE-202ENST00000306042 Q6ZRX8 168 aa6.09□□□□□ -1.44
PTPRE-202ENST00000306042 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.44
PTPRE-202ENST00000306042 J3KT08 172 aa6.08□□□□□ -1.44
PTPRE-202ENST00000306042 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
PTPRE-202ENST00000306042 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
PTPRE-202ENST00000306042 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
PTPRE-202ENST00000306042 VPREB1P12018 145 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
PTPRE-202ENST00000306042 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 KMT2BQ9UMN6 2715 aaPredicted RBP6.07□□□□□ -1.44
PTPRE-202ENST00000306042 LOC400499M0QZD8 3231 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
PTPRE-202ENST00000306042 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
PTPRE-202ENST00000306042 KIAA0087Q14695 138 aa6.06□□□□□ -1.44
PTPRE-202ENST00000306042 LINC00528Q8N1L1 170 aa6.06□□□□□ -1.44
PTPRE-202ENST00000306042 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
PTPRE-202ENST00000306042 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
PTPRE-202ENST00000306042 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 SDIM1Q6ZPB5 146 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 Q8NBF4 154 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 ATOX1O00244 68 aa6.05□□□□□ -1.44
PTPRE-202ENST00000306042 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
PTPRE-202ENST00000306042 CFAP47Q6ZTR5 3102 aa6.04□□□□□ -1.44
PTPRE-202ENST00000306042 NBEAL2Q6ZNJ1 2754 aa6.04□□□□□ -1.44
PTPRE-202ENST00000306042 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
PTPRE-202ENST00000306042 ZNF861PO60384 105 aa6.03□□□□□ -1.44
PTPRE-202ENST00000306042 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
PTPRE-202ENST00000306042 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
PTPRE-202ENST00000306042 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
PTPRE-202ENST00000306042 C3orf22Q8N5N4 141 aa6.01□□□□□ -1.45
PTPRE-202ENST00000306042 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
PTPRE-202ENST00000306042 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 CRYBG3Q68DQ2 2970 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 IGLV6-57P01721 117 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 A0A1W2PNN7 141 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
PTPRE-202ENST00000306042 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
PTPRE-202ENST00000306042 NIPBLQ6KC79 2804 aaeCLIP5.99□□□□□ -1.45
PTPRE-202ENST00000306042 CELSR2Q9HCU4 2923 aa5.99□□□□□ -1.45
PTPRE-202ENST00000306042 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
PTPRE-202ENST00000306042 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
PTPRE-202ENST00000306042 ASH1LQ9NR48 2969 aaKnown RBP5.98□□□□□ -1.45
PTPRE-202ENST00000306042 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
PTPRE-202ENST00000306042 LITAFQ99732 161 aa5.97□□□□□ -1.45
PTPRE-202ENST00000306042 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
PTPRE-202ENST00000306042 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
PTPRE-202ENST00000306042 Q6Q795 121 aa5.95□□□□□ -1.46
PTPRE-202ENST00000306042 OXTP01178 125 aa5.95□□□□□ -1.46
PTPRE-202ENST00000306042 LINC01547P58512 204 aaPredicted RBP5.95□□□□□ -1.46
PTPRE-202ENST00000306042 K7ERS5 55 aa5.94□□□□□ -1.46
PTPRE-202ENST00000306042 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
PTPRE-202ENST00000306042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
PTPRE-202ENST00000306042 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
PTPRE-202ENST00000306042 Q6ZVQ6 151 aa5.93□□□□□ -1.46
PTPRE-202ENST00000306042 HRNRQ86YZ3 2850 aaPredicted RBP5.92□□□□□ -1.46
PTPRE-202ENST00000306042 A0A1B0GW54 56 aa5.91□□□□□ -1.46
PTPRE-202ENST00000306042 DCHS1Q96JQ0 3298 aa5.91□□□□□ -1.46
PTPRE-202ENST00000306042 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
PTPRE-202ENST00000306042 FAM240AA0A1B0GVK7 77 aa5.9□□□□□ -1.46
PTPRE-202ENST00000306042 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
PTPRE-202ENST00000306042 MT-ATP8P03928 68 aa5.9□□□□□ -1.47
PTPRE-202ENST00000306042 Q8N9L7 120 aa5.9□□□□□ -1.47
PTPRE-202ENST00000306042 EIF4EBP3O60516 100 aaPredicted RBP5.89□□□□□ -1.47
PTPRE-202ENST00000306042 LINC00313P59037 77 aa5.88□□□□□ -1.47
PTPRE-202ENST00000306042 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
PTPRE-202ENST00000306042 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
PTPRE-202ENST00000306042 IMUPQ9GZP8 106 aa5.88□□□□□ -1.47
PTPRE-202ENST00000306042 SPRR4Q96PI1 79 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 SPINK1P00995 79 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 C8orf87E5RJ46 101 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 TMEM258P61165 79 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 LINC00846Q9NV44 126 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
PTPRE-202ENST00000306042 Q6ZR54 194 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 DMDP11532 3685 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 Q96NJ1 140 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 Q5VSD8 79 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
PTPRE-202ENST00000306042 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
PTPRE-202ENST00000306042 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
PTPRE-202ENST00000306042 DCHS2Q6V1P9 2916 aa5.85□□□□□ -1.47
PTPRE-202ENST00000306042 hDV103S1A0JD37 113 aa5.84□□□□□ -1.47
PTPRE-202ENST00000306042 LAMA5O15230 3695 aa5.84□□□□□ -1.47
PTPRE-202ENST00000306042 KRTAP10-1P60331 282 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 Q6ZQT0 140 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 RELNP78509 3460 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 NF1P21359 2839 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms