RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 MOBPQ13875 183 aa9.45□□□□□ -0.9
TRAPPC1-201ENST00000303731 SYS1-DBNDD2H3BUS1 97 aa9.44□□□□□ -0.9
TRAPPC1-201ENST00000303731 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
TRAPPC1-201ENST00000303731 SOSTDC1Q6X4U4 206 aa9.43□□□□□ -0.9
TRAPPC1-201ENST00000303731 SPANXCQ9NY87 97 aa9.43□□□□□ -0.9
TRAPPC1-201ENST00000303731 TIMM17BO60830 172 aa9.42□□□□□ -0.9
TRAPPC1-201ENST00000303731 NPC2P61916 151 aa9.42□□□□□ -0.9
TRAPPC1-201ENST00000303731 KRTAP13-3Q3SY46 172 aa9.42□□□□□ -0.9
TRAPPC1-201ENST00000303731 FAT4Q6V0I7 4981 aa9.42□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
TRAPPC1-201ENST00000303731 SLC25A20O43772 301 aa9.4□□□□□ -0.9
TRAPPC1-201ENST00000303731 LINC01545Q5VT33 79 aa9.4□□□□□ -0.9
TRAPPC1-201ENST00000303731 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
TRAPPC1-201ENST00000303731 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-201ENST00000303731 Q8N377 158 aa9.39□□□□□ -0.91
TRAPPC1-201ENST00000303731 LINC00308Q8TCZ7 52 aa9.39□□□□□ -0.91
TRAPPC1-201ENST00000303731 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC1-201ENST00000303731 C9orf153Q5TBE3 101 aa9.38□□□□□ -0.91
TRAPPC1-201ENST00000303731 LITAFQ99732 161 aa9.38□□□□□ -0.91
TRAPPC1-201ENST00000303731 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
TRAPPC1-201ENST00000303731 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
TRAPPC1-201ENST00000303731 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
TRAPPC1-201ENST00000303731 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
TRAPPC1-201ENST00000303731 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
TRAPPC1-201ENST00000303731 LINC00518Q8N0U6 118 aa9.36□□□□□ -0.91
TRAPPC1-201ENST00000303731 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
TRAPPC1-201ENST00000303731 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-201ENST00000303731 SPRR1BP22528 89 aa9.33□□□□□ -0.92
TRAPPC1-201ENST00000303731 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
TRAPPC1-201ENST00000303731 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
TRAPPC1-201ENST00000303731 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
TRAPPC1-201ENST00000303731 C20orf202A1L168 122 aa9.3□□□□□ -0.92
TRAPPC1-201ENST00000303731 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
TRAPPC1-201ENST00000303731 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
TRAPPC1-201ENST00000303731 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
TRAPPC1-201ENST00000303731 LAMTOR3Q9UHA4 124 aa9.3□□□□□ -0.92
TRAPPC1-201ENST00000303731 COX7BP24311 80 aa9.29□□□□□ -0.92
TRAPPC1-201ENST00000303731 AKR1D1P51857 326 aa9.29□□□□□ -0.92
TRAPPC1-201ENST00000303731 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
TRAPPC1-201ENST00000303731 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
TRAPPC1-201ENST00000303731 KRTDAPP60985 99 aa9.28□□□□□ -0.92
TRAPPC1-201ENST00000303731 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
TRAPPC1-201ENST00000303731 Q6ZVH6 145 aa9.27□□□□□ -0.93
TRAPPC1-201ENST00000303731 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
TRAPPC1-201ENST00000303731 IFITM1P13164 125 aa9.26□□□□□ -0.93
TRAPPC1-201ENST00000303731 XP32Q5T750 250 aa9.26□□□□□ -0.93
TRAPPC1-201ENST00000303731 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
TRAPPC1-201ENST00000303731 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
TRAPPC1-201ENST00000303731 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
TRAPPC1-201ENST00000303731 TEX49A0A1B0GTD5 131 aa9.23□□□□□ -0.93
TRAPPC1-201ENST00000303731 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
TRAPPC1-201ENST00000303731 CD164Q04900 197 aa9.23□□□□□ -0.93
TRAPPC1-201ENST00000303731 TAL2Q16559 108 aa9.23□□□□□ -0.93
TRAPPC1-201ENST00000303731 PRO1933Q9H354 126 aa9.21□□□□□ -0.94
TRAPPC1-201ENST00000303731 A4D1N5 150 aa9.2□□□□□ -0.94
TRAPPC1-201ENST00000303731 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-201ENST00000303731 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
TRAPPC1-201ENST00000303731 A6NDN8 102 aa9.19□□□□□ -0.94
TRAPPC1-201ENST00000303731 SNRPEP62304 92 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-201ENST00000303731 DEFB105AQ8NG35 78 aa9.19□□□□□ -0.94
TRAPPC1-201ENST00000303731 Q1RN00 199 aa9.18□□□□□ -0.94
TRAPPC1-201ENST00000303731 HRCT1Q6UXD1 115 aa9.18□□□□□ -0.94
TRAPPC1-201ENST00000303731 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
TRAPPC1-201ENST00000303731 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
TRAPPC1-201ENST00000303731 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 H7C2G1 150 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 Q5XG85 94 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 ATOH7Q8N100 152 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
TRAPPC1-201ENST00000303731 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
TRAPPC1-201ENST00000303731 SMIM29Q86T20 159 aa9.13□□□□□ -0.95
TRAPPC1-201ENST00000303731 VAMP3Q15836 100 aa9.1□□□□□ -0.95
TRAPPC1-201ENST00000303731 SMIM11BQ8TCY0 68 aa9.1□□□□□ -0.95
TRAPPC1-201ENST00000303731 C9orf92A6NGG3 77 aa9.08□□□□□ -0.96
TRAPPC1-201ENST00000303731 HSBP1L1C9JCN9 74 aa9.08□□□□□ -0.96
TRAPPC1-201ENST00000303731 S100A2P29034 98 aa9.07□□□□□ -0.96
TRAPPC1-201ENST00000303731 F8WEM9 126 aa9.06□□□□□ -0.96
TRAPPC1-201ENST00000303731 TCL1BO95988 128 aa9.05□□□□□ -0.96
TRAPPC1-201ENST00000303731 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
TRAPPC1-201ENST00000303731 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
TRAPPC1-201ENST00000303731 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
TRAPPC1-201ENST00000303731 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
TRAPPC1-201ENST00000303731 IGLV8-61A0A075B6I0 122 aa9.03□□□□□ -0.96
TRAPPC1-201ENST00000303731 LINC00575Q6W349 94 aa9.02□□□□□ -0.97
TRAPPC1-201ENST00000303731 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
TRAPPC1-201ENST00000303731 Q6JHZ5 121 aa9□□□□□ -0.97
TRAPPC1-201ENST00000303731 S100A6P06703 90 aa8.99□□□□□ -0.97
TRAPPC1-201ENST00000303731 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
TRAPPC1-201ENST00000303731 KRTAP9-6A0A140TA67 174 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms